Xiphophorus couchianus (Monterrey platyfish): 114134203
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Entry
114134203 CDS
T05908
Name
(RefSeq) aggrecan core protein-like
KO
K06256
CD44 antigen
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114134203
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114134203
04090 CD molecules [BR:
xco04090
]
114134203
00535 Proteoglycans [BR:
xco00535
]
114134203
00536 Glycosaminoglycan binding proteins [BR:
xco00536
]
114134203
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114134203
Exosomal proteins of other body fluids (saliva and urine)
114134203
Exosomal proteins of colorectal cancer cells
114134203
Exosomal proteins of bladder cancer cells
114134203
CD molecules [BR:
xco04090
]
Proteins
114134203
Proteoglycans [BR:
xco00535
]
Cell surface proteoglycans
Others
114134203
Glycosaminoglycan binding proteins [BR:
xco00536
]
Hyaluronan
Cell surface receptors
114134203
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Xlink
DUF7871
DUF6480
Collectrin
Motif
Other DBs
NCBI-GeneID:
114134203
NCBI-ProteinID:
XP_027856424
LinkDB
All DBs
Position
2:19306080..19319301
Genome browser
AA seq
373 aa
AA seq
DB search
MWTFLVGVIFGILASGNSKPLQVNSRTCSYAGVFLVEGESRYYLTFEMAMKVCEQLESTM
ASPAQVQEAYNNSMETCRYGWINNGSSVILRQTQHENCARNMTGFIVNSHTGDHSDAYCY
DKNDSAEKNCSKAFQENRVLLSDTTALTSPQPLTDGTIESETSSLEGLINAPTPASTPDD
LSKDDFTMVPEEGNPTGGSNVTSAFTTMEPDPRDGSGMESAQLEEKTTPVINAETTSSEK
RPIETLEPTDAKPNSGGRKSLNLENDIENQKDSSSSDWLVVIGVIVAVGAILLVCAAVAR
RNGWCGRKQTLNITIKESSDDNGVAAAACSSRNPEREQEMVTLMNKETIQENGNTEEFTV
ITLEQSPDKDEQA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtggacttttcttgtaggggtcatttttggaatactggcctctggcaattcaaagcca
cttcaagttaactctcgcacctgcagctatgcaggtgtctttctggttgagggagagagt
cgttactatctgacttttgaaatggccatgaaagtctgtgagcagctggagagcacaatg
gcaagtccagcgcaagtccaggaggcctataacaacagcatggaaacttgcaggtacggt
tggatcaacaatgggagcagtgtcattctcaggcaaactcagcatgaaaactgtgcaagg
aacatgactgggtttattgttaactcacatactggagatcattctgatgcttactgttat
gacaaaaatgatagtgctgagaagaactgcagcaaagctttccaggaaaacagagtttta
ctctcagatacaacagctctgacatcaccacagcctctgactgatggcacaatagagtca
gaaacaagctcactggagggcttgataaatgctccaacacctgcaagtacacccgacgat
ctgagtaaagatgatttcactatggttcctgaggagggaaaccccactggaggaagcaat
gtcacttccgctttcactacaatggagccagacccacgtgatggatctgggatggagtca
gctcaactagaggaaaaaacaactccagtgatcaacgctgaaacaacatcgagtgaaaag
agacctattgaaacattggagcccactgatgccaaaccgaatagcggaggaagaaaatca
ttgaatctggaaaatgatatagagaatcaaaaagacagcagctcatcagactggctggta
gttattggtgttattgtagcagttggtgcaattctccttgtgtgtgcagctgtcgccagg
agaaacgggtggtgtggcagaaagcaaacgctgaatatcacaatcaaagagagcagtgat
gacaatggggtcgcagctgcagcatgcagctcccgcaacccggagagagaacaggagatg
gtgacgctcatgaacaaggagaccatccaggagaacggcaatacggaggagttcactgtc
atcacgttagagcagtctccggataaagacgagcaggcctga
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