Xiphophorus couchianus (Monterrey platyfish): 114134287
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Entry
114134287 CDS
T05908
Symbol
trip11
Name
(RefSeq) thyroid receptor-interacting protein 11
KO
K23368
thyroid receptor-interacting protein 11
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114134287 (trip11)
Membrane trafficking [BR:
xco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
114134287 (trip11)
Retrieval pathways
114134287 (trip11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GRAB
CCDC39
Taxilin
ABC_tran_CTD
SlyX
Motif
Other DBs
NCBI-GeneID:
114134287
NCBI-ProteinID:
XP_027856579
LinkDB
All DBs
Position
19:complement(2052703..2074448)
Genome browser
AA seq
1953 aa
AA seq
DB search
MSSWLGELGSGLGQSLGQVGGSLSSFTGQISNFTKDMLLEGVEEVGDAATELHVSNSKLA
EVEAAFSTQKSEHERLKKRHAELEEKLEASEIQIKQQSAEYRTLLQQKDVEISHLKARQS
GLQEEVQKLQRSAQSVASSPAVLPVTTASLTATSSSPSIFLTRPAGPHHDFHSDEMDISD
VLWSQQEINKLSTEVMRLEADVAHWRRMSQASTTPGTGNGDQGEILKLQRTIKELRDEMS
REVDEHQHELAALQDAQRQKLAEVTRRHREELAEYEERIEELEEQNRSGDGQVSSPSDSS
KLPELQGNVQTLQEAAERREKQLAELSASLEDARRNQASLQLERDDALEENAGLLQNYSR
LQASVAELQTRVQEQEGKALQKTQFEHEIQTLRNNLAAAEKEIERLKDFSEAEPREEVEH
ADILELNTIIGMLRQEKEVLEQEKLELQHRLTVAGEQTVCKNASLMESGEAESLEDLKAE
LERREKVLRATEEERDTLMSELEELDRQNQEATQHLITAKEQLSGQLKEAEAELIRMTAE
LSASKDQKGALERELETQKEKTSQSAFTLNDLHMAKQQLEQRVKELKDALGRANEQSREA
RRETAELKKTLQKREEQLAATKAETAHGGESRTEEELAGKERELSDLRREMDQMRSSYEK
GMSEEYEVKMANRRLKDEHENALRKLEELGKQLKENQAALNRTTREKDTRIEALKLEKNQ
LELELSQAERALSEQVKQYQQTIEELTRARSMDASALQTEHESAIKLNQEKDLEIAKLRR
DVEQLAADHRDTNEMLSITVAGQKQLTDLLQEKDVFVETLKQNAEDIQREMENRVSAMTK
EVDVLKQAVDEKDKQLGGMKEESSHLKEEIDRLRDQQSRPQPLAEPKTLDIITELETEIA
QLKSSRNALEDEVRSLKRTSEEQQASLQAQRSELEQAAVRHQQTTLDYDRLIQAKDEEIT
RLQQSVDQGHLPAFQGDVILQEDKTWSLNQDNGNEKHDLSKAEIEKLVRGIEEKETEIVQ
LNEKNLSLTRQLEQLAFSRDEVGKLSQMIRQKDLEIQALHARVSSGQDVLYLQQQLQAFA
VEREQMLAVLNDKTRENGQLRSDYHRLVDVVAAKEAALVRLQQENQRLSNVSDPSGSQEM
FKETIQNLSRIIREKDIEIDALTQKCQTLVTVLQSMGGEAGTASGGVSSNQFEELLQERD
TLKQQVKKMEEWKQQVITTVKNMQHESAQLHEELIKLQGQVSADSDCSSKLSVDYARLIQ
SYEQKEKRLGGLSLELAQVQQTISQLSSTKDVLLGKLDSVAQTPEAAAPTAQTRALNLTA
EPQTQQTTEVLQAQLAEKENLIRTLQENNHRLSDAASASESEQRSQAEDVRQVRDRLESL
QRSVREKDLLIKTKGDQLSQVSEALRNRENDNEVLKQAVTNLKERALILELDARKLKEEN
EQVAARSREKESEFRALQETNMQVSLLLREKEFELSSISEKAATVERMLKDKELGKSGEL
NQLLNELKSMQEKAVMFQQERDRMMMALKQKQMETTALQSELQHTRDKEQRLNLELERLR
SHLLEIEDSYTREALAAEDRETELRRRVALLDDKVATSSNAVENASQQASMQVESLQEQL
SNVVKQRDDALLQLRTSQEQVRQYAVSLSNLQMVLEQFQQEEKAMYSAELEKHKKEKDEW
KRKALLLEDQASALQLNLDEVNAALDSASRLTDQIDQKEEQIEELKKQVNVRQEMLEEAQ
KKLMNLLNSTEGKIDKVLMRNLFLGYFHTPKTKRADVLRLMGSVLGLSREQVDQMLEDDA
RHGVGGWVSSWLGGRGAQSVPNTPQRPTSGPGLNSSFSEMFVKFLEMESTPSLPAPRLPV
HDIRPLSAPPPGRTGGSSSGSAGAAAGIRRPGESNPFLAPRSAAVPLVAGSGPAGSGGHL
LMKPITDSLPTFTPVPVSAEASAGAVLKDLLKQ
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctggctgggtgaactgggctccggcctcggccagtctctgggacaggtcggg
ggcagcctgtcgtcgttcaccgggcagatatcaaactttaccaaagacatgctactcgaa
ggagtggaagaagtcggagatgctgccacagaattacacgtgtccaattccaagttggct
gaggtggaggctgcgttttccactcaaaaatcagagcatgaaaggctgaaaaaacgtcac
gcagaactggaggagaagctggaggcctcagagatccagattaaacaacagtctgcagaa
tacagaaccctcctgcagcagaaagatgtggagatcagccacctaaaagctcgacaaagc
ggcctccaggaagaagtccagaagctgcagcggtcggcgcagtcggtcgcctcctctcca
gcggtgctgccggtgaccaccgcctccctgaccgccacctcctcctctccttccatcttc
ctgacgcgccccgcagggcctcatcacgacttccatagcgacgaaatggacatcagcgac
gtcctttggtcgcagcaggaaatcaacaagctgtccacagaagtgatgcgtctagaggcg
gacgtggcgcactggaggagaatgtctcaggcatcaacaaccccaggaactggtaatggt
gaccagggggagattctcaaactacaaagaactattaaggagttacgggacgaaatgagt
cgagaggtggatgaacaccagcatgagctggcagctttgcaggatgcccagcggcaaaag
ctggcggaggtcacgcgccgccacagagaggagctcgcagagtacgaggagaggatagag
gagctggaggagcagaatcgcagtggggacggtcaggtcagctctccgtcggattcctcc
aaactgcctgagctccagggaaacgtccagactctgcaggaagcagcggagcggcgcgag
aagcagctggccgagctgtctgccagtctggaggacgcgcggaggaaccaggcctccctg
cagctggagagggacgacgccctggaggagaacgcggggctgctgcagaactactcgcgc
ctgcaggcctccgtggctgaactgcagacacgagtccaggagcaggaggggaaggctctg
caaaaaacccagtttgagcatgagattcagacgcttagaaataacttagcagctgcagaa
aaagaaatagagagactcaaggacttttctgaggcagagccgagagaagaggttgagcat
gcagacatcttggaactgaacaccattataggaatgttgaggcaagaaaaggaagtccta
gaacaagaaaagcttgagctgcaacacagactgacggtagcaggggagcaaacggtttgc
aaaaatgcgtcgctgatggagtctggtgaggcggagtccctggaggatctgaaggcggag
cttgagaggagagagaaagtcctgagagccaccgaggaggagcgggacaccctcatgtcg
gagctggaggagttggaccggcagaaccaggaagcaacacagcatttgatcaccgcaaag
gagcagctctctggccagttgaaggaagctgaggcggagctgatcagaatgaccgcagag
ctcagcgcctccaaggaccagaaaggagcgctggaacgagagctggagacccagaaagag
aaaacgagccaaagcgcgttcaccctcaatgacctccacatggccaaacagcagctggaa
cagagggtgaaggaactgaaagacgcgttgggacgtgcgaacgagcagagtcgggaagcg
aggcgagaaacggccgagctgaagaagaccttgcagaagcgagaggagcagctagccgct
actaaagcagagacggctcatggaggagagagtcggacggaggaggagctggcggggaag
gagagggagctgtcggacctcaggagagaaatggaccaaatgaggagctcctatgaaaag
gggatgtctgaagagtatgaggtaaagatggcgaaccggaggttgaaggacgagcatgag
aatgctttgaggaagttagaggagctaggcaagcagctgaaagaaaaccaggccgctcta
aacaggacaacaagggagaaagacactcgtatcgaagcgctcaagctggagaagaaccaa
ctcgaactggagctgtcgcaggctgagagagcgctgtcagagcaggtgaaacagtaccag
cagaccatcgaggagctgacccgagccagatccatggacgcctcggctttgcaaaccgag
cacgagtcggccatcaagctaaaccaggagaaagacctggagatcgccaagctgaggcga
gacgtggagcagctggcggcagaccacagagacaccaacgagatgctctcaatcaccgtc
gcggggcagaagcagctgactgacttgctgcaagagaaggatgtctttgtggaaactttg
aagcagaacgcggaggatatacagagagagatggagaacagggtgtcagccatgaccaaa
gaggtagacgtcctcaaacaagcggtggacgaaaaggataagcagctgggagggatgaag
gaggagagcagccatctgaaagaggagatcgatcggctgagggatcagcagagcagacca
caaccactggctgaacccaagactctggacatcatcaccgagctggagacggagatcgcc
cagctgaagtcatccaggaacgcactggaagacgaagtccggtcgctgaagagaacctcg
gaggagcagcaggcgtctctgcaggctcagcggagcgagctggaacaggccgcggttcgc
caccagcagacgacgctcgactacgacagactcattcaagccaaagacgaggagataacc
cgcctccagcagagcgtggaccagggtcacctcccggcattccagggagacgtcatcctc
caggaggacaagacgtggtctctcaatcaggacaacggcaacgagaagcacgacctgtcc
aaggccgagatagagaaactggtccgcggcatcgaggagaaagagaccgagatcgtccag
ctgaacgagaaaaacctctcgctcaccaggcagctggaacagctggcgttctctcgcgac
gaagtgggcaaactctcccaaatgatccggcagaaagatctggagatccaagcgctccat
gcccgggtctcgtcaggtcaggacgtcctctacctccagcagcagctgcaggcgttcgcc
gtggagcgcgagcagatgttggccgtgctcaacgacaagacgagggagaacgggcagctg
cgctctgactaccaccgcctggtggacgtcgtggccgcgaaggaagccgccctggtgagg
ctgcagcaggagaaccagcggctctccaacgtgagcgacccctcagggagccaggagatg
ttcaaggagaccatccaaaacctgtcccgcatcatcagagagaaggacatcgagatcgac
gctttgactcagaagtgccagaccttggtgaccgtcttgcagtcgatgggaggcgaggcc
ggcactgcgtccggcggcgtcagcagcaaccagttcgaggagcttcttcaggagagggac
acgctgaagcagcaggtgaagaagatggaggagtggaagcagcaggtgatcaccacggtc
aagaacatgcagcacgagtcggcgcagctgcacgaggagctgatcaagctgcagggccag
gtgtctgccgacagcgactgcagctccaagctgtccgtcgactacgcccgactgatccag
agctacgagcagaaggagaagaggctgggaggtttgagtttggagctggcgcaagtccag
cagaccatcagtcagctcagcagcaccaaggatgtgctgctggggaaactggatagcgtt
gcgcagactcccgaggccgcagcgccgaccgcccaaacaagagctctcaatcttacagcc
gagccccaaacccaacagaccaccgaagttctgcaagcgcagctggctgagaaagaaaac
ctaatcaggacccttcaggagaacaaccaccggctctccgacgcagcgtccgcctcagag
agcgagcagaggagtcaggctgaggatgtccgccaggtccgggacagactggagtccctg
cagaggtcggtgagggagaaagacctgctcataaagaccaaaggagaccagctgagccaa
gtgagcgaggcgctgcgcaaccgcgagaacgacaacgaggtattgaagcaggccgtgacc
aacctgaaggagcgggcgctcatcttggagttggacgcaaggaagctgaaggaggagaat
gagcaggtggcggctcgctctcgggagaaggagtcggagttcagggctctgcaggaaaca
aacatgcaggtttcgcttctgctcagagagaaggagtttgagctgagctcgataagcgag
aaggccgccacggtggagcggatgctcaaagacaaagagctgggtaaatccggtgaactg
aatcagcttctgaacgaactgaagtccatgcaggagaaagcggtgatgttccagcaggag
agggaccggatgatgatggcgctgaagcagaagcaaatggagaccacagcgctacagtct
gagctgcagcacacgagggataaagagcagcggctcaacctggagctggagaggctgcgc
agccacctgctggagatcgaagactcctacaccagggaagccctcgctgcggaggaccgg
gagacggagctgcgcaggcgggtggcgctgctggatgacaaagtggccacgtcgtcgaat
gccgtggaaaacgccagccaacaggccagcatgcaggtggagtctctccaggaacagctg
agcaatgtggtgaagcagagggacgacgcacttttacaactcagaacctctcaggaacaa
gtcaggcagtatgcagtgtcgctctcaaacctgcagatggtgctagagcaattccagcaa
gaggagaaagccatgtactcagcagagctggagaagcacaaaaaggagaaggacgagtgg
aagagaaaagctctcctgcttgaagaccaagcatctgcgctgcagctgaatttggacgaa
gtcaacgctgctctagattcggcgtctcgcctcacagatcagatcgatcagaaagaggag
caaatcgaagagctaaagaagcaagtgaatgtgaggcaggagatgctggaggaggcacaa
aagaaactcatgaaccttctcaacagcacagaaggaaagatcgacaaggttctgatgcgc
aacctgtttttgggctactttcacacgcctaaaacgaagcgggccgatgtgctgaggctc
atgggaagcgtgttgggactgagcagagaacaagtcgatcagatgttggaggacgatgcc
cgccatggtgttggcggatgggtatcgagctggctcggaggcagaggagctcagagtgtg
ccgaatacgccacagaggcccaccagtggcccggggctgaactcgtctttctccgagatg
tttgtgaagttcttggagatggagtcgaccccgtcgctcccagcgccgaggctcccggtc
cacgacatcaggcctctgagcgcaccgcctcctgggagaaccggtggctcttcttcaggc
tccgcgggagctgcggctggcatcaggagacccggtgaatccaatccgttcctggctcct
cgttctgctgcggtgccgctggtggccggttctggccccgccggctcgggaggtcacctg
ctgatgaagcccatcactgactctctgcccaccttcacccctgtgcctgtctcagccgag
gccagcgctggagccgtgctcaaagacttgctaaagcagtga
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integrated database retrieval system
