Xiphophorus couchianus (Monterrey platyfish): 114134296
Help
Entry
114134296 CDS
T05908
Symbol
ddb2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
KO
K10140
DNA damage-binding protein 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03420
Nucleotide excision repair
xco04115
p53 signaling pathway
xco04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114134296 (ddb2)
09124 Replication and repair
03420 Nucleotide excision repair
114134296 (ddb2)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
114134296 (ddb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114134296 (ddb2)
03400 DNA repair and recombination proteins [BR:
xco03400
]
114134296 (ddb2)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
114134296 (ddb2)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
114134296 (ddb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_EIPR1
EIF3I
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
114134296
NCBI-ProteinID:
XP_027856600
LinkDB
All DBs
Position
2:complement(12049295..12061080)
Genome browser
AA seq
492 aa
AA seq
DB search
MKNKPTKSQANGSKSKVKKGAAEHTSLSKKLRDKIDGETSKEGPSYSSAGAHRKTGPGSI
LHYIYRSTLGQSLHSQMRQCLQEPFVRSLSSYHFHGASSPFNRRITCLEWHPTHPTTVAA
ASKGGDIFLWDFEKSETKSFTRGNGAGDFIGGMKFCPTDFSRVYAASGEGKLTLHSFEGH
TPTLLSRTQDCSHDHHNVCFWYCCVDVSVSRQMLVTGDNMGELLLLGLDGKKIFSSKLHK
AKVTHAEFNSRCDWLLATASVDHTVKLWDLRNIKDKKSFLYEMPHEKAVNSAYFNPLDAS
KLLTTDQHDQIRVYSSSDWSKPQHIIQHPHRQFQHLTPIKATWHPLYDLIVAGRYPDDRI
CTGDQRSIDVFDSNSGELVFQMYDSTASGIKSINKFSPMGDVIASGMGVTLLIWDHDESL
VSGRHKPIEETSADWVRGQRRGQRRGQQRSGRDRRGPTGDAKLKKKLASLEETETKTKTG
CTKQKQTQKRKL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaagcccaccaagtcacaggcaaatggatcgaaaagtaaagtgaagaaagga
gctgcagaacacacgtcgctgagtaaaaaactgcgagacaagatagatggagaaacatct
aaagaggggccttcttacagttctgcaggagcccacaggaagactggccctggaagtata
ctgcactacatatacaggagtactttgggccagagtctgcactctcagatgagacagtgt
ctccaggagccgtttgttcgatctctgtcatcctaccattttcatggcgccagcagtcca
tttaatcgcagaatcacctgcttggagtggcaccccactcatcccaccactgtggctgca
gcctcaaaagggggggacatttttctgtgggactttgagaagtctgaaacaaaaagcttt
actcgagggaacggagcgggagacttcattggcgggatgaagttttgccccacagacttc
tccagagtttatgcggcttctggtgaggggaagttgaccctgcatagctttgagggccac
actcccaccctgctgtccagaacacaagactgcagtcatgatcaccacaatgtttgcttt
tggtactgttgtgtcgacgtgtctgtgagtcggcagatgcttgtgactggggacaacatg
ggagagcttctacttctgggtctggatgggaaaaagattttcagcagtaagttgcacaaa
gccaaagtgacacacgcagagtttaactcccgatgcgactggttgctggcgacggcctcg
gttgatcacacggtgaagctctgggatctgaggaacatcaaggacaagaagagcttcctc
tacgaaatgcctcacgagaaagccgtcaactcagcctatttcaaccctttggacgcctcc
aagctgctcacaacagatcagcacgaccagatccgcgtgtactcctcctctgattggtcg
aagcctcagcacatcattcagcacccacacaggcagtttcagcacctcacacccatcaag
gccacctggcatcccctgtatgacctgattgtggcgggccgataccctgatgaccgcatc
tgcaccggagatcagaggtccattgacgtctttgactccaacagtggagagttggtgttt
cagatgtatgactccactgcctcagggatcaaatcgatcaacaagttcagtccaatgggt
gacgtcatcgcatctggaatgggtgtaacactactgatctgggaccacgatgagtcgctg
gtcagcggccgacacaaaccgattgaggaaacgtcggcagactgggtcagaggtcagcgg
aggggtcagcggaggggtcagcaacgctccggcagagaccggaggggtccgaccggggat
gcaaagctgaagaaaaagctagcttctctggaagaaaccgagaccaaaaccaaaaccggg
tgcaccaaacaaaaacaaactcagaagaggaaactgtag
DBGET
integrated database retrieval system
