Xiphophorus couchianus (Monterrey platyfish): 114134333
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Entry
114134333 CDS
T05908
Symbol
aqr
Name
(RefSeq) RNA helicase aquarius
KO
K12874
intron-binding protein aquarius
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114134333 (aqr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114134333 (aqr)
Spliceosome [BR:
xco03041
]
Complex B
Other components
Prp19-related factors
114134333 (aqr)
Complex C
114134333 (aqr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
ResIII
AAA_30
DEAD
UvrD-helicase
UvrD_C_2
SLFN-g3_helicase
AAA_16
AAA
Parvo_NS1
AAA_22
PhoH
DnaB_C
nSTAND3
Motif
Other DBs
NCBI-GeneID:
114134333
NCBI-ProteinID:
XP_027856671
LinkDB
All DBs
Position
19:complement(8398561..8447478)
Genome browser
AA seq
1468 aa
AA seq
DB search
MATTEKESPAKKVAAPSVSQINAEYVTQLANKYWAPHVKEKLPFDAQVMEDVYEKEIFSS
KFAIRKIMLLEFSQYLENYLWVNYTPEVSSKAFIMSICCIVNEKFRENVPAWEVFKKEPT
HFPFFFKRVMEAVLAGEEAGLTLKEQTILLVFLDHCFNSLEVDLIREQVQQLISLPMWMC
LLPSRLLQELKKVPKLQKFWNLIKKKFDKMDAEAVEQATKERTFLSSLIKKFRVILMSVP
AEGPVPMEKVHYCERFIELLIDLEALLPTRRWFNTVLDNSHLLVNCQLSGLTKREKEGHL
FCQLLDMLKFYTGFEINDQTGNALTEKEMTTLHYDRITSLQRAAFAHFPELHDFALSNVA
AVDTRESLTKLFGHLSPNMLHRVASYLCLLPELPEGQDTTIEKEFLLEMMVSRHERRISQ
IEQLNQMPLYPTEKIIWDENIVPTEYYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLES
TYEIRQDIEDVVWRMKPWQSEYGGVVFGGWARMAQTITTFSIVEVAKPNIGESWPARVRA
DVTVNLNVQDHIKQEWEGLRKHDVCFLITVRPMLLYGTRFDRRQPFLDQTGLVYVRGCEV
QGMLDEKGRVIEEGPDPKPKLRGDTRTFRVWLDPNQYQQDMTSSIQNGTEDPYETFNIIM
RRKPKENNFKAVLETIRHLMNTECVVPDWLHDIILGYGDPGSAHYSKMPNQISTLDFNDT
FLSLDHLRSCFPGYTIKVLEENPELQVPPFRIKFPISTTKDKGKKRKADEEEKDSEEDKT
LNVELYVAPNRGPYPYNQPKRNTIQFTPTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQI
ISNLYHNFPEQRTLIVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYG
RVNYVLARRLELLREVGRLQESLDVPGDVSYTCETAGHFYLYQVISRWEQYMSKVKPKQG
KKVEVETVAAHFPFHKYFSNAPQPVFKGRSYEEDMDIAEGCYRHIKKIFTQLEEFRAFEL
LRSGLDRSKYLLVKEAKIIAMTCTHAALKRHDLVELGFKYDNILMEESAQILEIETFIPL
LLQNPQDGYSRLKRWIMIGDHHQLPPVIKNMAFQKYSNMEQSLFTRFVRLGVPTVDLDAQ
GRARASLCNLYNWRYKHLGNLPHVQQLPEFQVPNPGLSFDFQLINVEDFNGVGESEPNPY
FYQNLAESEYSVALFMYMRMLGYPSERISILTTYNGQKHLIRDVINQRCAGNPYFGQPHK
ITTVDRFQGQQNDYIILSLVRTKAVGHLRDVRRLVVAMSRARLGLYIFARVSLFENCFEL
TPAFKQLTARPLQLHIRSHEYYSQEQPRDEQPDRIIKDMPEMTNFVYNMYMHMIQTSQKY
RQQQQQKLALPPQQSQEDAAVETKQGSSAEPQPETPMEQETPGAANPEPNAEKTTEEEGD
QETVDHTKMPEHPGRDSDSEEEEDDEEQ
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacggagaaagagagtccagctaaaaaggttgcagcgccttcagtgtcccaa
ataaatgctgaatatgtcacgcagctggctaataaatattgggctccccatgtaaaggaa
aagctgccttttgacgctcaggtgatggaagatgtctatgaaaaagagattttctcatca
aaattcgccatcagaaaaattatgctacttgaattcagtcaataccttgaaaattatctg
tgggtgaattacacacctgaggtctccagcaaagcctttatcatgtccatttgttgcatc
gtcaatgagaagttcagagaaaacgttccagcttgggaggtgttcaaaaaggagcccaca
cacttcccgtttttcttcaaacgtgtgatggaagctgtgctggcaggcgaggaggctggt
ctcaccttaaaggagcaaaccatacttctggtcttcctggaccactgcttcaacagtttg
gaggtggatctgatcagagaacaggtgcagcagctcatctctctgcctatgtggatgtgc
ctcctaccatccagactcctacaagagctgaagaaagttcccaagctgcagaagttttgg
aatctaatcaagaaaaaatttgataagatggatgccgaagcagtggagcaagcaaccaag
gaaaggactttcctttcgtctctcattaaaaagtttcgggtcattctgatgtcagttcca
gctgaggggcctgttcccatggaaaaagtgcattactgcgaaagattcattgagctgctg
attgatttagaggcgctccttcctacacggcgttggttcaatactgtgctggacaactcc
cacttgctggtcaactgccagctttctggtctcaccaaaagagagaaggaaggacacctt
ttctgtcagcttcttgacatgctgaaattctacactggctttgagatcaatgaccagaca
ggaaatgctttgactgagaaagagatgaccactctgcactatgacagaatcacttcactc
cagagagctgcctttgctcatttcccagagttgcatgactttgcattgtccaatgttgct
gctgtggacacgagagagtctttgaccaaactctttgggcatctcagtcccaacatgctc
caccgggtggcctcatacctgtgtctcctgcctgagctacctgaaggccaagacacaacc
attgagaaagaatttctcctcgagatgatggtgtctcgccatgagcgcagaatctctcag
attgagcagttgaaccagatgcccctttatccaacagagaagataatctgggatgaaaac
atcgtcccaacggagtattactcaggcgaaggttgcttggcgctaccaaagctgaatctc
cagttcctgacgcttcacgactaccttttgaggaactttaacctctttcgtctggagtcc
acatatgagatcagacaggacattgaagatgtggtgtggagaatgaaaccatggcaatca
gaatatggtggagtggtgtttggaggctgggctcggatggctcagactatcactactttt
tccatcgttgaagttgcgaagcccaacatcggagagagctggcctgctcgtgtacgggct
gacgtcacagttaacctcaatgtccaagatcacatcaaacaagaatgggaaggtctgcga
aagcacgatgtttgctttctgatcacagtgcgccccatgttgctctacggcactcgcttc
gaccgacgtcagccctttttggaccagaccggcctggtgtatgtgagaggctgcgaggtc
cagggtatgctggatgaaaagggccgtgttattgaagaaggacctgatcccaaacccaag
ctacgtggggacaccagaacttttcgtgtttggctcgatccgaaccagtatcagcaggac
atgaccagcagcattcagaatggaactgaagacccatatgagaccttcaacatcatcatg
agacgcaaacccaaagagaacaatttcaaggcggtgctggagacaatcaggcacctgatg
aacacagaatgtgttgtgcctgactggcttcatgacattatccttggctacggtgaccca
ggcagtgcccactattccaagatgcccaatcagatctccacattggacttcaacgacacc
ttcctgtctctggaccacttacggtcgtgttttcctggctacaccataaaggttctggag
gagaatcctgaactccaagttcctcctttcagaatcaagtttcccatctctaccacaaaa
gacaaaggaaagaagagaaaggctgatgaagaagagaaggacagcgaggaagataaaacc
ctaaatgtggaactatatgtcgcccccaaccgtgggccatatccttacaaccagcccaaa
aggaatacgattcagttcacacctactcagattgaagccattcgagccgggatgcagcca
ggactaacaatggttgtgggaccgccaggcactggaaagactgatgtggctgttcagatc
atctcaaacctctatcacaattttcctgagcaaaggactctcatagtgactcactctaat
caggctttgaaccagctctttgaaaagattatggctctagacattgatgagcgtcacctt
ctgcgtctgggccacggagaggaggaactggaaacagagaaagactttagcagatatggc
agagtgaactatgtccttgctagaagactggagcttctcagagaggtgggaagattacag
gagagcttggacgtcccaggagacgtgtcatacacctgtgagactgcagggcacttctac
ctctatcaggtgatatctcgctgggagcagtacatgagcaaagtcaaacctaaacagggc
aagaaggtggaggtggagactgttgctgcacactttcccttccacaagtacttttccaac
gccccgcagcctgtattcaagggccgatcgtacgaggaggacatggacattgcggagggc
tgctatcgccacatcaagaaaatatttacccagctggaggagttcagggcctttgagctg
ctgaggagtggactggaccgctccaagtatctcctggtgaaggaagctaaaatcatcgcc
atgacctgcacacacgctgcactcaaacgtcatgacctggtggagctaggatttaagtac
gacaacatcctgatggaggagtctgcacagattcttgagattgagacattcatccctctg
ctgttgcagaacccacaggatggctacagcaggctgaagcgttggatcatgatcggagac
caccaccagctgcccccagtaatcaagaacatggcattccagaagtactccaacatggag
cagtctctgttcaccagatttgtgcggttgggggttcctaccgtagatttggatgcacag
ggccgtgcgcgtgcaagcctttgtaacctttacaattggcgctataaacaccttggaaac
ctgcctcacgttcagcagcttcctgagttccaggtacccaaccctggcttgagctttgac
ttccagctgattaatgtggaggactttaatggggtgggagaatctgaacccaacccttac
ttttaccagaacctggctgagtcggagtactctgttgctctctttatgtatatgaggatg
ttgggctacccatcggagcgaatcagcatcctcactacctacaatggacaaaagcacctg
atcagagatgttattaaccaacgatgtgctggaaacccttactttgggcagcctcacaag
attacaacagtggacaggttccagggtcagcagaatgactacatcatcctctcgctggtt
cgtaccaaagctgtgggacacctaagggatgtgaggcgtcttgtggtcgccatgtcaaga
gccagattgggtctgtacatctttgctcgggtgtcactgttcgagaactgcttcgagctg
actcccgccttcaagcaactgactgccagaccactgcagctacacatcagatcgcacgag
tactacagccaggaacagcctagggatgagcagcccgaccggatcatcaaggacatgcca
gagatgacaaactttgtgtacaacatgtacatgcacatgatccagacctcccagaagtac
agacagcagcaacagcagaaactggctttacctccacaacaatctcaggaggacgctgca
gtcgagacaaagcagggtagctccgcagaaccacagccagaaactcccatggagcaggaa
accccaggagctgcgaaccctgagccaaacgcagagaagaccacggaggaagagggggac
caggaaacagtcgaccacacgaagatgccagagcatccaggcagagacagcgacagtgag
gaggaggaggatgacgaagagcagtag
DBGET
integrated database retrieval system
