Xiphophorus couchianus (Monterrey platyfish): 114134652
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Entry
114134652 CDS
T05908
Name
(RefSeq) protein quaking-A isoform X1
KO
K14945
protein quaking
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114134652
Spliceosome [BR:
xco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
114134652
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GFIT
Motif
Pfam:
STAR_dimer
Quaking_NLS
KH-I_KHDC4-BBP
KH_1
KH_12
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
114134652
NCBI-ProteinID:
XP_027857170
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Position
19:20028314..20117374
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AA seq
392 aa
AA seq
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MMVGEVEVKERPRPSPDYLMQLLNEKKLMTSLPNLCGIFTHLERLLDEEINRVRKDMYSD
TVNGLVDRHPLELPEPIGPIVHLQEKLFVPVKEYPDYNFVGRILGPRGLTAKQLEAETGC
KIMVRGKSSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDTQNRAEIKMRRAVEEVKKLL
VPAAEGEDNLKKMQLMELAILNGTYRDNNVKTPPLAFSLAAAAAAAQGPRLIAAPAGQVL
PPQALRPPTPAGTPIMNLIRPTQMAAMLPNGTPTLVPPTPDGGLIYTTPYEYPYALAPTS
LLEYPIEHSGVLGKRAWGSLGTAVNFGQPGQEGSLFYPGVGVLDAATMSHSQDLLKGAMA
TKVRRHDTRVHPYQRIVTADRGQFSLLATFCY
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatggtcggagaggtcgaagtgaaggagcgaccgaggccgagtccggactatttgatg
caattattaaacgaaaagaagctcatgaccagtttgccaaatctctgcgggatcttcacg
cacctggagcggctcctggatgaagagatcaacagagtgcgtaaagatatgtacagcgac
acagtgaacggccttgtggacagacacccgctggagctgcccgaacccatcggacccatc
gttcacctgcaggagaaactgtttgtgcctgtcaaagagtacccagactataactttgtg
ggaagaatcctcggtccccggggactcactgccaaacagttggaagcagagacgggatgc
aaaattatggtgcgaggaaagagctccatgagagacaagaagaaggaggagcagaacaga
gggaagccaaactgggaacacctaaatgaagaccttcacgtcctaatcaccgttgaagac
acacaaaacagagcagagatcaagatgaggagagcagtagaggaagtcaagaagctcctc
gtgcctgctgctgagggtgaagacaatttgaagaagatgcagctgatggagctggctatt
ctcaacgggacatacagagacaacaatgtcaaaacacccccccttgcgttctctcttgca
gcagcggcagcggccgctcagggcccccgcctcatagcggcccccgcgggtcaggtgttg
cctccccaggcactccggcccccgacgccggccgggacccccatcatgaacctcatccgg
cccactcagatggccgctatgctgcccaacggcacccccaccttggtgcctcccacacca
gacggcggactaatctacaccaccccttacgagtacccctacgccttggcacccacctcg
ctgctggagtaccccatcgagcacagtggggttctaggtaagagagcctgggggagcttg
ggtacagcggtcaactttggccagcctggacaggagggcagcttgttttaccccggagtc
ggggtgctggacgcagctaccatgagccacagtcaggacttgttgaaaggtgcaatggct
actaaagtgagacggcatgacacgcgggtccatccttaccaaaggattgtgaccgctgac
agaggtcagtttagtctcctagctacattttgctattga
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