Xiphophorus couchianus (Monterrey platyfish): 114134687
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Entry
114134687 CDS
T05908
Symbol
nlrc3
Name
(RefSeq) NLR family CARD domain-containing protein 3 isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xco04054
]
114134687 (nlrc3)
Pattern recognition receptors [BR:
xco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
114134687 (nlrc3)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
CARD
AAA_16
AAA_33
LRR_12
Motif
Other DBs
NCBI-GeneID:
114134687
NCBI-ProteinID:
XP_027857234
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All DBs
Position
2:2490004..2512151
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AA seq
1147 aa
AA seq
DB search
MNCGEVDAVDPVYGENDDTKIQAAQKSSEAQVWQKQLETTTTDTTRTRPGARNTEPHWIQ
KHKDQLLNFLSHSFLEEILQHLRNVNVLTSAEETSIKGAGQLQDQINMLTSITTAKESQS
SDALQAFIESSDSEVAQLVLSYDATVKKHKEVLLQQYEKQRDRDSVSCPKLNISSRSLLM
VDGLSDFQQKEHDLMQVGVTRGARRNHLRQLGLAKLFEPLTRVSLPPRVTLTVGVAGIGK
TTWVRHFIRQWCQGTMCPDIHFVLPFTLCELNGLDKLSAERLLKITFPHLPAPSLVLNDA
CRTLLIFDGLDEFRSALNFSDAAPCNDPKKEISIDDLVTNIIRGNLLPDISVWVTSRPGI
ASLIPGGLVDRVTEIPGFSPADIQIFLNHHFSENDFATRIWAHLEAHKILMVMCYIPCIC
WMLAETLLYIMQSGTQESLPKTCTELYAHFCSMKAEVGEPRGREPVKSEQHHATNRKLLG
NLGRLAFYSLLKHKYTFSEQDLRAYGIDLLQTQCSLGVGVLIRMESTIHTTYRFTHLTLQ
EFLAATFYHVSSKRAIFDLFSESTMSWPKIGFQNHFRSAFQHSQQAEDGHLDLFVRFLTG
LLCPTTIKPLAGVLALGKDDGSQKVWAGGFLQSLLSSVGSVVSLRSVNLAYCLQELQHNE
LLRSVEEDLRQGSLAGKLTRPHCVVLGFLLHVSLECSEQTNLTGCLNYPTVKSLLPQLLY
CTHLRLENNNFKDDVMELLGSLLSAKDCHIRKISLADNVISNKGAKALSRALLVNRTLTS
INLKNNNIGSKGAKFLAEALKMNQALVSINLQNNSIGEEGAQGIADVLQSNRKLVSLNMR
KNTIGAGGAKRIAEALKTNRTLTKLILCSNQLGDKGTVALAEALTFNHTLLSLQLQSNSI
SNKGMTGLTKALRLNRGLVSLNLRENSIGVEGARNMAHALQENNSLQNLDLTANLLHDDG
VQAIAGAIRFNQGLTSLHLQWNFIKSTATKALAQALLSNTTIQLLDLQENTIGNEGVIHL
AEALKVNASLRTLCLQGVSAGTSGAVAMAEALTSNQTLQTLDLRGNAVGMEGAKALANSL
KSNRSLKSLNLQENSLGMDGAIFIATALKGNHQLAYINLQGNGIGESGAKVISDAIRASA
PGCVVDI
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgaattgtggtgaggttgatgccgtggacccagtttatggagaaaatgatgatacaaaa
atccaggcagcacagaagagcagtgaggctcaagtctggcaaaaacagctcgagacgacg
acgacagacacgacaaggacccgaccaggagcgaggaacacagagccacattggatccaa
aagcataaagaccagctgctgaacttcctttcacattccttcctggaggaaatacttcag
cacctcagaaatgtgaacgtcttgacttcagctgaagagacgagcattaagggagcaggc
cagttacaggaccagattaatatgctcacctccatcaccactgcaaaggaaagccaaagc
tcggacgcgctgcaggcgttcatagagagctcagactcagaggttgcccagcttgtctta
agctacgatgccacggtgaagaagcacaaagaggtgctgctgcagcaatatgagaagcaa
agagacagagattcagtcagctgccccaaactgaacatctcctcaaggagtttactgatg
gtcgatggactctccgacttccagcaaaaggagcacgatctgatgcaggtgggagtgact
cgaggagcgaggaggaaccatctgaggcagttgggccttgccaagctctttgagcccctc
acaagggtcagcttgcctcccagagtgacgctcacagtcggagtggctggtattggcaaa
acaacttgggtgcgacacttcatcagacaatggtgccaagggactatgtgtccggatata
cactttgtcttgcctttcacgttgtgcgagctcaacggtctggacaaactttctgcagag
aggctgttgaaaattactttcccgcatctgccagcacccagtttggtcctaaacgacgcc
tgcaggacgctgctcatcttcgatggtttggacgaatttcgcagcgctttgaatttctct
gatgcagctccttgcaacgacccaaagaaggaaatttccattgacgaccttgtaacgaac
atcatccgggggaatctgctcccagacatatcggtgtgggtgacttcgagaccaggaatt
gcctccctgatcccaggcggattggtggaccgggtcacggagatcccaggattcagccca
gcggacatccagatctttctgaaccaccacttctccgagaacgatttcgccaccagaata
tgggcacacttggaggcccataaaatactaatggtgatgtgctacataccatgcatttgc
tggatgctagcagagacgttgctgtacatcatgcagagcgggacacaggaaagcctgcct
aagacctgcactgagctgtatgcccatttctgctccatgaaagcagaagtaggtgaacca
agaggcagggagcctgtaaaatctgagcagcaccatgcaaccaatcgcaaacttctgggc
aaccttggacgactggccttctacagcctcctgaaacacaaatacacgttcagcgagcag
gacctccgggcctatgggatagacttactgcaaactcagtgcagccttggagttggagtt
ctcatccgaatggagtctaccatacacaccacttacaggtttacacacctgaccctgcag
gagtttcttgcagctacattttatcatgtttcctccaagcgggccatctttgacctgttc
tcagagagcacaatgtcatggcccaagattgggttccaaaaccacttcagaagcgccttt
caacactcgcagcaagctgaagacggtcacttggatctatttgtgcgcttcctgacaggc
ttgctgtgcccaacaacgataaaacctctggctggggtcttggctctcgggaaagacgat
ggaagccagaaggtttgggctggagggtttttacaaagcctcctgtccagcgtgggttcg
gtggtgtccctccgttctgtcaacctggcctattgtttacaagagctgcaacataacgag
ctgctccggagtgtagaggaggacctacggcagggcagcttggctggaaaactgacacgg
ccacattgtgtggtgctgggtttcctcctgcatgtctctctagagtgcagtgaacaaacc
aacctgacaggatgtctgaactacccaacggtgaaaagtttactcccacagctgctgtac
tgcacccatctcaggctggagaataataacttcaaggacgacgtcatggagctgctcggg
agcctcctgagcgccaaagactgccacatccggaaaataagtttggcggacaacgtcatc
agcaacaaaggagccaaagccctgagccgagccctgctggtgaatcgaactctaacctct
atcaacttaaagaacaacaacattggatcaaaaggggcaaagtttctggctgaggctctg
aaaatgaaccaagccttggtatcaatcaacctgcagaataactccatcggggaagaagga
gctcagggcatcgcagacgtcctgcagtccaaccgcaaactcgtgtctctaaacatgcgg
aaaaatacaatcggtgcaggaggagccaagaggatcgcagaggcgctgaagacaaaccga
actcttacaaagttgatactctgcagtaaccaactgggggacaaaggaaccgtcgctctg
gctgaagctctgactttcaaccacacgttgctgtcgcttcaacttcagagtaactcgatc
agcaacaagggaatgacgggcctgaccaaagcgctgaggctcaaccggggactcgtctct
ctgaatttaagggagaactccattggggtggagggagccaggaacatggctcacgctctg
caggagaacaactctctgcagaacctcgatctcacagctaacctgctacacgacgacggg
gttcaagcaattgctggagcgatcaggtttaatcaaggactcacgtctctgcacctccag
tggaacttcataaagtcgacagcgactaaagctctggcccaggcgctgctctccaacacc
accatccagctcctggatttacaagaaaacaccatcgggaacgaaggagtgattcacctc
gctgaagctctgaaggtcaacgcgtctctgcgaaccttatgtctgcagggagtgtcagcg
gggacgagtggcgccgtagcgatggctgaagctctgacgtccaatcagacgctccaaaca
ttagatctgcgtgggaatgcggtgggaatggagggagccaaagctttggccaactctctg
aaatccaacagaagccttaaatcattaaatctgcaggaaaactcgttggggatggatgga
gccatattcattgctacggctctgaaggggaaccaccagctggcttacatcaatttgcag
ggaaatggaatcggtgaatccggggcaaaggtcatatctgacgcgataagagccagcgct
ccgggctgcgtggtggatatctaa
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