Xiphophorus couchianus (Monterrey platyfish): 114134725
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Entry
114134725 CDS
T05908
Name
(RefSeq) LOW QUALITY PROTEIN: gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04080
Neuroactive ligand-receptor interaction
xco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114134725
04082 Neuroactive ligand signaling
114134725
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114134725
Ion channels [BR:
xco04040
]
Ligand-gated channels
GABA-A
114134725
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CBM_17_28
DUF7205
Motif
Other DBs
NCBI-GeneID:
114134725
NCBI-ProteinID:
XP_027857291
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Position
19:complement(16638097..16657150)
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AA seq
528 aa
AA seq
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MGFVRAEVVHRAQPRALTHRLRPPQQGASLPAQFLFSALVVWRRVWQDGSSLTAFRPPHI
SAXRASRFPLATAGTPVELQAPVMRRERSSRPLSVLVCFIVLWQTRLRAVGNSTQNSKDI
ATFTKILDSLLDGYDNRLRPGLGDRVTEVKTNVYVTSFGPVSDTDMEYTVDVFFRQSWLD
ERLKFHGPMEILPLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIMENGTLLYTMR
LTVQAECPMHLEDFPMDSHSCPLKFGSYAYTKTEVTYIWTRNASQSVDVADDGSRLNQYD
LVGQTVGKETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESV
PARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTK
RGWAWDGKSIVNDKEATVKKEKNTYAVAVANYKPNITKDSTLPTISKCTLNEPNKMKPEQ
NKKTFNSVSIIDRISRIMFPVLFGTFNLVYWATYLNREKVIKDLDPSK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgtcagagcagaggttgttcaccgtgcgcagccgcgcgctctcacgcacaga
cttcgtccgcctcagcagggagcctctctccccgcgcagtttttgttttcagctttggtt
gtttggaggagagtctggcaggatggaagctctctgaccgccttcagacctcctcacatc
tccgctnngcgcgcatcacggtttcccttagcaacggcgggcacacctgtcgagcttcag
gctccagtcatgagaagagaaagaagctcgcgtcctctgtctgtgctggtctgcttcatc
gttctgtggcaaacacggttgagagcagtcggtaattcaacacagaactccaaagacatt
gcaacattcaccaaaatcctggacagtctcctagatgggtatgacaacagactcagacct
ggccttggagaccgagtgacagaagtaaagacaaacgtctatgtgaccagttttggacca
gtgtctgacacagatatggaatacacagtggatgtcttcttccgtcaaagctggttggac
gaacggctgaagttccatggaccaatggagatccttcctctcaacaatctgatggccagt
aagatttggacccctgacacattctttcataatggcaagaaatctgtggcccacaacatg
accatgcccaacaaacttctgaggatcatggagaatggaacgctgctctacactatgagg
ttaacagttcaagctgagtgtcccatgcatctggaggacttccccatggactcacattca
tgtcctcttaagtttggcagctatgcctacacaaagacagaggtaacttacatctggaca
agaaatgcctcccagtcagtagatgtagcagatgatgggtcgaggctcaaccagtatgac
ttggttggacagactgttggaaaggagaccattaaatccagcactggtgaatacacagtg
atgacggctcattttcacttaaagaggaagattggatactttgtgatccagacgtatttg
ccctgcatcatgacagttatcctatcccaggtttccttctggctcaaccgggaatcagtg
cctgctagaactgtgtttggagtaaccacagttctcacaatgacgaccctgagtattagt
gcccgtaactctctgccaaaggtggcctacgctactgccatggactggttcattgcagtc
tgctatgcatttgtcttttctgctctcattgagtttgccactgttaactacttcaccaag
cgaggctgggcttgggatggaaaaagtattgtcaatgacaaggaagcgactgtcaagaag
gagaagaacacctacgctgtagctgtggcaaactacaagcccaacatcactaaagactca
acgctgcccaccatctccaagtgcactctgaacgagcccaacaagatgaagcccgagcag
aacaagaaaaccttcaacagcgtcagcataatcgaccgcatctcccgtattatgttccct
gtgttgtttggcaccttcaacctagtctattgggccacttacctgaatagagaaaaagta
atcaaagacctggatccatctaaatga
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