Xiphophorus couchianus (Monterrey platyfish): 114134736
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Entry
114134736 CDS
T05908
Symbol
gabrg1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-1 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04080
Neuroactive ligand-receptor interaction
xco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114134736 (gabrg1)
04082 Neuroactive ligand signaling
114134736 (gabrg1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114134736 (gabrg1)
Ion channels [BR:
xco04040
]
Ligand-gated channels
GABA-A
114134736 (gabrg1)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
TcdB_toxin_midC
STPRs
Motif
Other DBs
NCBI-GeneID:
114134736
NCBI-ProteinID:
XP_027857311
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Position
19:complement(16616097..16634544)
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AA seq
461 aa
AA seq
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MKSLLFSALRDKAMNPWLLFALLGLCSAIGPSKQEDEDYEDVPINKTWVLSPKVYESDVT
LILNKLLQGYDNKLRPDIGVRPTVIETAVYVNSIGPVDPINMEYTIDIFFAQTWYDSRLK
FNSSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTIN
AECYLKLHNFPMDEHSCPLEFSSYGYPKNEITYRWQRRAVEVADQRYWRLYQFAFVGMRN
TTDEAHTQSGEYVIMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSL
GITTVLTMTTLSTISRKSLPKVSYITAMDLFVSVCFIFTFAALMEYGTLHYFTSNRQTKK
SKANSSAQQRVPSMVNIRPGTSLLQMNNIVPYHEDDDYAYDCLDGKDCASFFCCFDDCRS
GAWRENRMHVRVSKIDSYSRIFFPTAFGLFNLVYWIAYLYL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgctgcttttctcggcactgcgggacaaagccatgaatccctggctgctcttc
gcgctgctcggtctctgttcagccattgggcccagtaaacaggaagatgaagactacgag
gatgtacccataaataaaacctgggtgttatcgccaaaggtctatgagagtgacgtgact
ttgatcctcaataaactgcttcagggctacgacaacaaactgcggcctgacatcggagtg
aggccgacagtgattgaaacagcagtttatgtcaacagtatcggaccagtggaccccatc
aacatggaatacaccattgacatcttctttgcccaaacatggtatgacagccgattgaag
ttcaacagttcgatgaagctgctcatgcttaacagtaacatggtagggaaaatctggatt
cccgacaccttcttcaggaattcccgcaaatccgatgcccactggatcacaactcccaac
cgacttttgaggctgtggagtaatggaagagtcatgtacacactgaggttgactattaat
gcggagtgttaccttaagctgcataactttccaatggatgagcactcgtgtccgctggag
ttttcgagctatggttatccaaaaaacgagatcacatatcggtggcagaggcgggcagtg
gaggtggccgaccagcgttactggagactctaccagtttgcttttgtagggatgaggaat
accaccgatgaggcacacactcagtcaggggaatatgtcataatgacaatattttttgac
ttgagtcgacggatgggctatttcaccattcagacgtacattccctgcagcatgatagtg
gtcttgtcctgggtgtccttctggattaacaaggatgccgtcccagctcggacatctcta
ggaatcactacagtcctcactatgacaactctgagcaccatctccaggaagtccctgccg
aaggtttcctacatcactgccatggatctgttcgtctctgtctgcttcatcttcaccttc
gctgctctcatggagtatgggaccttgcactacttcaccagcaaccggcagaccaagaag
tctaaagccaacagcagtgcccagcagagagttcccagcatggtaaatatccgacctgga
acatccctgttgcagatgaacaacatcgttccatatcacgaggacgatgactacgcctac
gattgcttagatggaaaagactgtgccagcttcttttgctgcttcgacgactgccgatcg
ggagcctggagagaaaacaggatgcacgttcgagtttctaagattgattcttactcgcgg
atattttttccgactgcttttggcctttttaatctagtttactggattgcttatctttat
ttataa
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