Xiphophorus couchianus (Monterrey platyfish): 114134780
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Entry
114134780 CDS
T05908
Name
(RefSeq) dentin sialophosphoprotein-like isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114134780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114134780
Membrane trafficking [BR:
xco04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
114134780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
Motif
Other DBs
NCBI-GeneID:
114134780
NCBI-ProteinID:
XP_027857379
LinkDB
All DBs
Position
19:274359..305324
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AA seq
1469 aa
AA seq
DB search
MSSLTVEEDQRWVPTHVQVTVLKGRGLRGKGKHGTSDVYTIIQLGKEKYSTGVAEKTTEP
EWREECSFELQPGVLESAERSGYPAGSNELVLTVMHRALIGLDVFLGQAVIQLDELFHAR
RYVKNDYSHEFEMKGEPTALLLVTLWWPIASRWYRLNSKTGKKEKERGDIQVTILFTRNN
LTASMYDLVMKDKGASTFSKLKERMKGKRRSSDEESSSAVVPGGYSSLYRMRQRLPSDGG
GEEDYEDDEGGEVRRSKMRTFFLRGKLRKSSDTRSSTSLGSESSESSSRGGSLSPTAGIS
VVVSDLSNSPSNSSNFTADNSPEHTANISPKSSSLRCEFGDDAGEITIAVPPPTVCVNGS
HASKVQAQDRGSGKPSGSLGSGLLLQRSMAHSVSLQNLSTKPSAELPKGPAGDGRRWSFD
RAGEEERAAIAAALGQSGAGEEERPEPASLPEASQAEPESQVKKQRRNLFSHGRSESAGK
GQSQSKGESEQSAAATEDKHRAWFGSKDSHNKPSLVVSTKLEPRTDPHPPPLPLSRHPPG
VPGDPTSLVSALHHTNPFSRSQTTPPPISQCNPFYSRLQHNPFFTEMLTNQTLKSPLPPL
PYLSSSRPPITDLFPQSSNPDLMQDSPTVEDTADAKDQPVERPLPPVPLVNKEPLIKKLS
NPFLSAEERNLDLEWDESFEAFAAGRLQSPEEFAMESRTQQNTVDDHPLEHDRSKGELQP
VPDANEQTNISDVLYDQPGGRILSNELPLPIQMRNNNALHFDTFPKFLETIPEHRSFDSD
DSTLNTPTNSPEPTDFIVTEQDSNTTNDFTHTNINAAPFHISSAQLNNNSSSSPDPSSSG
LGSSTEEDVLSCFSSHSEKFSVSSSEEAESTVLHFKNSSDSTTVKTIKTSGSGDGIADKS
VDQFLIADSHKTVDQPEDSHAEMVGWNFLGDSFQPLSLTTSEKETESEPGGSQTPKTPDL
NPDLLQTLQTTSVVCQQSSNDGEEESKDCTVDPSEDFSARSKNSTTEELMPASSDDEFSS
TLPSVPVITSSPEVKQDLLDVTNENTGSEAQKVRPYSHVEFGIFDEYLNVSNLASSPSQD
FDTAWLNIQTPEQSSNTLRRSHYFSADSQDYLTCDSHSFSNGSELNETLFSANSTRSGEM
SNVQAVPDDLFRMGHTNLSQSSNFEVNQNEIFGEFLQFHQGNLVNVETSLTGGDGLQVLP
APPPDSSSNPKIHSDIGEGNQDDIFLQSPQGQHAALQRSLSEGTLAPAFDQLFPSSFGSD
PCAIQESSFAQLDPVFPFPNTFAPSLIPESNSFHVAFSALSPLATISATEPPGSEPGATP
QPDVTKRRQAANQPSSPHPVKPLTTAMLAEEKRSVLATGLEKLKSTIHPGRSSQIAEQEA
DRKKALTEGAGSYYHLTHSELVALLVQREAELEGQRAEFERQKLLLAKREVELKKLKPQV
RDLEDYIDTLLVRIMEQKPTLLQVRPKFK
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcactaaccgtagaggaggaccagaggtgggtaccgacgcacgtccaggtgacg
gtgctcaaaggcaggggcttgcggggcaagggcaaacacggcaccagcgatgtgtacacc
atcatccagctggggaaggagaagtactccaccggcgtggcggagaagaccaccgagccc
gagtggagggaggagtgctcgttcgagctgcagcccggcgtgctggagagcgccgagcgg
agcggatacccggccgggagcaacgagctagtcctgaccgtgatgcaccgggcgctgata
ggactggacgtgttcctcggtcaggctgtgattcagctggatgaactatttcacgcgagg
agatacgtcaaaaacgattacagccacgaatttgagatgaaaggggaaccaaccgctctc
ctcctggtgaccctgtggtggccaatcgcttcaaggtggtatagactcaactccaagacg
gggaagaaggagaaggagaggggagacattcaggtcaccatcttgttcacccgaaacaac
ctgacggccagcatgtacgacctggtcatgaaggacaagggcgcctccaccttcagcaaa
ctcaaggagcgcatgaagggcaaaaggaggtccagcgacgaggagtcgtcctccgccgtg
gtgccgggtgggtacagctccctgtaccgcatgcgccagagactgccgagtgacggaggc
ggggaggaggactatgaggatgacgaggggggggaagtccggcggagcaagatgaggacc
ttcttcctgcgggggaagctgcggaagtcgtccgacactcgctccagcacctccctgggc
tccgagagcagcgagtcgtcgtcgcgtggcggcagcctgagtccgacggccggcatcagc
gtggtggtgtctgacctgtccaactcccccagcaacagcagcaacttcactgcagacaac
agtccagaacacacagcaaacatttcgcccaagtcgtcctctctcagatgcgagttcggc
gacgatgccggcgaaatcaccatcgcagtgcctcccccgaccgtttgtgtaaacggaagc
catgcgtccaaagtccaggcccaggatcgaggctcaggaaaaccgtcaggttctttaggg
tcgggactgctgctgcagcggtccatggcccactccgtttccctgcagaacctcagtacg
aagccctccgccgagctgcccaagggccccgcgggggacggccggcgctggtccttcgac
agggccggtgaggaggagagggcggccatcgcggcagccctggggcaaagcggggccgga
gaggaggagcggccggaaccggcatcactgccagaagcctcccaggcggagccagagagt
caggtgaaaaagcagaggaggaacttgttctcgcatgggcggagtgagtctgcagggaag
ggtcagagccagtccaaaggcgagtctgagcaaagcgccgccgccaccgaggacaaacac
agagcgtggttcggatccaaggactcgcacaacaaacccagcctggtggtctccactaag
ttagagcccagaactgacccccacccaccacctcttccacttagtcgccatcccccgggt
gtccccggtgatcctacctctttggtttccgcactgcaccacactaaccccttttcccgt
tcacagaccacaccgcctcccatatcccagtgcaaccctttctactcccgcttacagcac
aaccccttctttacagaaatgttaactaaccagacactgaagtcaccgctgcctcctttg
ccttatctttccagctctcggccccccataaccgacctctttccacagtcaagtaatcct
gacttgatgcaagacagcccaacagtagaggacacggctgatgccaaagaccaacctgtt
gagagacctctccctccagttcccttagtaaataaagaacctttaatcaagaagttgtca
aacccctttctgtctgctgaggagcgtaacctggacttggagtgggacgaatcatttgag
gcttttgcagctggcagactgcagtctcccgaggagttcgccatggaaagcagaacacag
caaaacacagtcgatgaccatccactggaacacgaccgtagtaaaggtgaattacaacca
gtcccggatgcaaacgagcaaacaaatattagtgatgttctctatgatcagcctgggggc
agaattttatccaatgaacttccacttcctatccagatgaggaacaacaacgcacttcac
tttgacacctttccaaaattccttgaaacgatcccagaacacagaagctttgacagcgat
gactcgacgttgaacactcctactaactcccctgaaccgactgatttcattgtgaccgaa
caggacagcaacactactaatgattttacgcacactaatatcaatgctgctccctttcac
atctcatctgcacaactcaacaacaacagcagcagctctccagaccccagctcatcgggc
ctcggcagttcgaccgaagaagacgtgctctcctgtttttcatctcactctgagaaattc
tctgtgtcgtcctctgaggaagcggaaagcaccgtccttcacttcaagaattcctccgac
tcaactactgtaaaaaccataaagacctcagggtctggagacggcatcgctgacaagtcc
gttgatcagtttttgattgccgattcacataaaactgttgatcaaccagaggatagtcat
gccgaaatggttggttggaactttttaggggactcgtttcagcctctttctctgacgacg
tcggaaaaggaaacagaaagtgaacctggaggtagtcaaacacctaaaactcctgatctg
aaccctgatctgttgcagacactacaaacgacgtctgttgtgtgtcagcaatcaagcaat
gatggtgaagaagaaagtaaagattgcactgtcgatccttctgaggatttcagcgctcgt
tctaagaacagtaccacggaagaattgatgcctgcttcttcagacgatgaattctcttcc
acactaccatcggtacctgtcataacctcatcccctgaggtcaaacaagatttgttggat
gtgaccaatgagaacactggttctgaggcgcagaaggttcgcccttattctcatgtggaa
tttgggatttttgatgaatacctcaatgtcagtaaccttgcaagcagtcctagccaggac
tttgacaccgcttggttgaacatacagacccctgaacagagtagcaacaccttacgccgt
agccattatttcagcgctgactcgcaggactacttaacctgtgattctcactcattctcc
aacgggtcagagctgaatgaaactctattctcagctaactctactcgcagtggtgagatg
agcaacgttcaggcagtccctgatgatctttttagaatgggtcatacaaatctatcgcag
tcatcaaactttgaggtcaaccagaatgaaatatttggagaatttctccagttccaccaa
ggcaacttggtgaacgttgagacaagcctgacagggggcgatggattacaggttctgcct
gccccaccgccagacagcagctctaatccaaagatccacagtgacataggggagggaaat
caggacgacatcttcttacagtctccacaggggcagcatgccgcgctgcagcgctccctt
tccgaggggacgctggcacctgcctttgaccaacttttcccgtcctctttcgggagcgat
ccctgcgcaatacaggaatcctcctttgctcagctagaccctgtcttccctttccctaac
acatttgctccttctctaattcctgaaagcaatagcttccatgtagcgttctctgccctc
tctccactcgcaaccatttcggcgacagagccacccggctcagagcccggcgccacgcca
cagccggatgtgaccaagcggcggcaagcggccaatcagccgagcagcccccacccagtg
aagcccctgaccactgccatgctggctgaggagaagcggtcagtgctggccaccggcctg
gagaagctcaagtccaccatccatccagggaggagcagccagatcgccgagcaggaggca
gacaggaagaaggctttgacggaaggagcgggctcgtactaccacctgacccacagcgag
ctggtggccctgctggtgcagcgcgaggccgagctggaggggcagagggccgagttcgag
cgtcagaaactgttgctggccaagcgggaggtggagctgaagaagctgaagcctcaggtc
cgagacctggaggactacatcgacactctgctggtgcgaatcatggagcagaagccaacg
ctgctacaagtgcgccccaagttcaaatga
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