Xiphophorus couchianus (Monterrey platyfish): 114134781
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Entry
114134781 CDS
T05908
Symbol
atrn
Name
(RefSeq) attractin isoform X1
KO
K24332
attractin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
xco04091
]
114134781 (atrn)
Lectins [BR:
xco04091
]
C-Type lectins
Others
114134781 (atrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
GBD_ATRN
Kelch_1
EGF_LMN_ATRN
PSI
CUB
Lectin_C
Kelch_2
Kelch_HCF
EGF_TEN
NANM
EGF_Teneurin
PSI_integrin
EGF_laminin
EGF_2
DUF6242_C
DUF7015
Motif
Other DBs
NCBI-GeneID:
114134781
NCBI-ProteinID:
XP_027857382
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Position
19:complement(775840..927379)
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AA seq
1376 aa
AA seq
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MYGATRWACSGSGSGPGRSWLMLTTALLLSAVVLLSGLPGLTEAKECNKPCMNGQCNTAT
GSCVCFPGWVGDQCQHCGGRFRLTGPSGYLTDGPGNYQYKTKCTWLIEGQPNTVLRLRFN
HFATECSWDHLYVYDGDSIYAPLLAAFSGLIVPERYGNETVPEVVSQSGYALLHFFSDAA
YNLTGFNISYRVNTCPNNCSGRGECRVGNSTASVYCECEANWKGEACDIPYCLDDCGYPE
RGRCQGKSCICKAGWQGLDCSVSVPANSSFWSREEHLEPGLARASHKAVVEQGVMWVIGG
YVFNTSDYHMVKAYNLSSKTWLTLDPSVNTVTPRYGHSLALHEGKIYMYGGKIDSTGNVS
SQLWVFHIQNQTWVLLTPRPKDQYAVVGHSAHIVPPAQEWDSPVMLVLFGHCPLYGYISN
VQEYNIVKNTWSVVSTDGALVQGGYGHSSVFDPSTRAIYIHGGYKAFSANKYGLAGDLYK
FDVDKRKWTILRDSGFFRYLHTAVIVSGAMLVFGGNTHNDTSMSHGAKCFSSDFLAYSLA
CDEWTVLPRPDLHHDVNRFGHSAVFSDSIMYVFGGFNSLLLSDILTYTSPSCSAFTSPSS
CSQAWPGIHCVWNGSLGACLPWEGNSSSAEPLQQLPASCNTRSYADNERCEQYTDCYSCT
ANTNSCQWCSGQCVSLGSNCTAATGSIAEYDVCPKDNPSYVCNKKTSCKSCSVDQNCQWD
NRNQECISLPENVCGETWHLVGNSCLKFNTTSESYDNAKLACRNHNAVLASLTTQKKVDF
VLKELQIMNVMYKTTMTPWVGLRKINVSYWCWEDMSPFTNTTLQWLPGEPSDAGFCGYLA
EPASSGLKAQSCINPVNGSLCERPANHSAKQCKTPCAMRTTCSECTSGTSECMWCSNMKQ
CVDSNAYVASFPFGQCMEWYTMSNCPPENCSGYRTCGQCLDQPGCGWCTDPNNTGKGQCI
EGSYRGPFQTLVPAPSTLPGLPASPQPSLNSSMCPSEAKYNWSFIHCPACQCNGHSQCVN
ESVCEKCEDLTTGRHCESCISGFYGDPTNGGSCQPCKCNGHASMCNPSNGKCFCTTKGIK
GDRCHMCEVESRYQGNPLKGTCYYTLLIDYQFTFSLSQEDDRYYTAINFVATPEEPNRDL
DVFINASKNFNLNITWATSFTAGTQTGEEIPIISRCNIKEFKDSFSNENFDFRNSPNITF
FVYISNFTWPIKIQIAFSQHSNFMDLVQFFVTFFSCFLSLLLVAAVVWKIKQSCWASRRR
EQLLREMQQMASRPFATINVALEADEEPPDLIGGNVKSVPKPIALEPCSGNKAAVLSIFV
RLPRGSGGIPPPGQSGLAVASALVDVSQQMCVGYKEKSGGLRSRKQQPSAQPSTCI
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgtacggggcgacgcggtgggcctgctcgggctccggctctggccccggccggagctgg
ttgatgctcacaaccgcgctgctgctctcggccgtcgtgctgctctccgggctgccgggt
ctcaccgaggcgaaggaatgcaacaaaccgtgtatgaacggacagtgtaacaccgctacg
ggcagctgtgtgtgtttccccggctgggtcggggaccaatgccagcactgcggagggcga
ttcaggctcacaggaccgtccggttacctgactgatggcccaggaaactatcagtacaaa
accaagtgcacctggcttatcgagggacagccaaacaccgttctgagattacgattcaac
cactttgccactgaatgcagctgggaccatctctacgtttacgacggcgactccatttac
gcgccgctgctcgctgctttcagtgggctgattgttccggagcgatatgggaatgagacg
gttcctgaggtggtgtcccagtccggctacgccctgctgcacttcttcagtgatgcagcc
tacaacctgacaggcttcaatatttcatacagggtcaacacgtgtcccaacaactgctct
ggccgcggcgagtgccgggtgggcaactccaccgcctccgtttactgcgagtgtgaagcc
aactggaagggcgaagcctgcgacatcccatactgcctggatgactgcggttaccctgaa
aggggccgctgccagggaaagagctgcatctgcaaagccgggtggcaaggtctggactgc
tccgtctcggttcccgccaactcctcgttttggagccgcgaggagcacctggagcccggc
ctggccagggcgtcccacaaggccgtggtggagcagggcgtcatgtgggtcatcggaggc
tacgtcttcaacacgtccgactaccacatggtcaaagcttacaacctcagcagcaagacc
tggctgacccttgacccctccgtcaacacggtgacccctcgatatggtcactcactggct
ctgcacgaggggaagatctacatgtacggcggaaagatcgactcaaccggaaatgtgtcg
agtcagctgtgggttttccacatccagaatcagacctgggtcctccttaccccccggccc
aaggaccagtacgctgtggtgggacattcggcccacatagtgccacccgcgcaagagtgg
gacagtcccgtcatgctggtcctgttcggacactgtcctctttacggttacatcagcaat
gtgcaggagtacaacatcgtgaagaacacgtggagcgtggtgagtacagacggagcgctg
gtccaaggcggctacggccacagcagcgtgtttgaccccagcaccagagccatctacatc
cacggaggctacaaggccttcagtgcaaacaagtacgggctggcgggagacttgtacaag
tttgacgtggacaaacggaaatggaccattctgagagacagcggcttcttccgctacctt
cacacggcggtcatagtgagcggcgccatgctggtgtttggaggaaacacgcacaacgac
acgtctatgagccacggcgccaagtgcttctcctctgacttcctggcctacagtttggcc
tgcgacgagtggacggtgctgccccgaccggacctccaccatgacgtgaaccgcttcgga
cactccgccgtcttcagtgacagcatcatgtacgtgttcgggggcttcaacagcctgctg
ctgagcgacatcctgacgtacacctcgcccagctgctcagccttcaccagcccgtcgtcc
tgcagccaggcctggcccgggatccactgcgtgtggaacggcagcctgggggcgtgcctg
ccatgggagggcaacagctccagcgccgagccgctgcagcagctcccggcctcctgcaac
accagatcatatgccgataacgagaggtgtgagcagtacacagactgctacagctgcacg
gccaacacaaacagctgccaatggtgttcgggccagtgtgtgtctctgggaagtaactgt
accgctgcaacgggatccatagcggagtacgatgtttgccccaaagacaacccctcatat
gtgtgcaataagaaaaccagctgcaagagctgctctgtggaccagaactgccagtgggac
aatcgcaaccaggagtgtatctcactgccagagaacgtgtgcggcgagacctggcacctg
gtgggcaactcctgcctgaagttcaacacgaccagcgagtcgtacgacaacgccaagctg
gcctgcaggaaccacaacgccgtcctggcctccctcaccacgcagaagaaggtggacttt
gtcctgaaggagctgcagatcatgaatgtcatgtacaagacaacaatgactccctgggtg
gggctgaggaaaatcaatgtgtcctactggtgctgggaggacatgtcgcccttcaccaac
accaccctgcagtggctgcccggcgagccgagcgacgccgggttctgcggctacctggcc
gaaccggcctccagcgggctgaaagcgcagtcctgcatcaacccagtgaacggcagcctg
tgtgagcgacccgcgaaccacagcgccaagcagtgcaagaccccctgtgccatgcggacc
acctgcagcgagtgcaccagcggcacctcggagtgcatgtggtgcagcaacatgaagcag
tgcgtggactccaacgcctacgtggcctccttcccgttcggccagtgcatggagtggtac
accatgagcaactgtccacctgaaaactgttccggctacagaacatgcggccagtgtttg
gaccagcccggttgcggctggtgcacggaccccaacaacacggggaaaggccagtgcatc
gagggttcctaccgagggcccttccagacgttggtgccggcgccatccaccctgcccggt
ctgcccgccagcccccagccctccctgaactccagcatgtgccccagcgaagccaagtat
aactggtccttcattcattgcccagcctgtcagtgtaatggccacagtcagtgcgtcaat
gagagcgtgtgcgaaaagtgcgaggacctgacaaccggccgacactgcgagagctgcatc
tccggtttctacggcgatccgaccaacgggggcagctgccagccctgtaagtgtaacggc
catgccagcatgtgcaaccccagcaacgggaaatgcttctgcaccaccaaaggcatcaaa
ggagatcgatgccacatgtgtgaagtggagagccgttaccaaggcaaccccctcaaaggg
acatgctactacacgctcctcatcgactaccagttcaccttcagcctgtcgcaggaggac
gaccgctactacaccgccatcaacttcgtggccacacctgaggagccaaaccgcgatctg
gacgtgttcataaatgcctccaagaacttcaacctgaacattacctgggcgaccagcttc
acagcaggcacccagaccggagaggagattccaatcatctcccggtgtaacatcaaggaa
ttcaaagacagtttttccaacgagaacttcgatttccgcaacagtccgaacataacgttc
ttcgtctacatcagcaacttcacgtggcccattaagatccaaattgctttttcccagcac
agcaactttatggacctggtgcagttctttgtcacgttcttcagctgcttcctgtcgctg
ctgctggtggccgccgtggtgtggaaaatcaaacagagctgctgggcgtcacgacgacga
gaacaactgctgagggagatgcagcagatggccagtcggccttttgccaccatcaacgtg
gccttggaggcggacgaagagccacctgacctgataggaggaaacgttaagtccgttcca
aaacccatcgcccttgagccttgctctggcaacaaagccgccgtgctgtccatctttgta
cggttacccagaggctccggtggcatccctcctccaggacagtctggtctggcggtggcc
agcgcgctggtcgacgtctcccagcagatgtgcgtgggctacaaggagaagtccgggggt
ctgaggagccgcaagcagcagccttctgcacagccgtccacttgcatctga
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integrated database retrieval system
