Xiphophorus couchianus (Monterrey platyfish): 114134782
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Entry
114134782 CDS
T05908
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04814
Motor proteins
xco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
114134782
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114134782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114134782
03036 Chromosome and associated proteins [BR:
xco03036
]
114134782
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114134782
Membrane trafficking [BR:
xco04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
114134782
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
114134782
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
114134782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
MVD-like_N
Motif
Other DBs
NCBI-GeneID:
114134782
NCBI-ProteinID:
XP_027857386
LinkDB
All DBs
Position
19:50886..102348
Genome browser
AA seq
1277 aa
AA seq
DB search
MSQTRRSTYTRTTSSGSSRMSSDGGGRPAKVGSLVEVIGKGQRGTVAYIGNTLFASGKWV
GVILDEPKGKNDGTVQGKRYFTCQENYGIFVRQSQIQLVDDGADTSPETPEPTAGRVPKR
EILETSKSAKLRGLKPKKVQHVSLNSTPTTRKTTARRPKQPSRPAGGGGKGAASGSASAS
AGEMSSSEPSTPAQTPLAAPVIPTLHSPGNPLAPGPSKEEEALRAQVKDLDEKLETLKMK
RTEDKAKLKELEKHKIQLEQLQEWKTKMQEQQAELQKQLKEAKREAKEAMEAKERYMEEM
SDTADAIEMATLDKEMAEERAESLQLEVDSLKERVEELTMDLEILKHEIEEKGSDGAASS
YHVKQLEEQNSRLKEALVRMRDLSASEKQEHVKLQKQMEKKNTELDSQRGQKEKLQEEMT
AAEKTIDELKEQVDAALGAEEMVEMLTERNLDLEEKVRELRETVTDLEAINEMNDELQEN
ARETELELREMLDLGAARVREAEKRVEAAQETVADYQQTIKKYRELTAHLQEVNRELTSQ
QEASAELQQQPPAEMFDFKIKFAETKAYAKAIEMELRKMEVAQANRHVSLLTSFMPESFL
RHGGDHDCILVLLLIPRLIHKAELISKQAQEKFDLNENCVERVGLKGGVGEQLSFAGGLV
YSLSLLQATLHKYEQALSQCSVEIYKKVGSLYPEMSVHERSLDFLIDLLHKDQLDETVNV
EPLTKAIKYYQHLYSIHLADQSEDCTMQLADHIRFTQSALDCMAVEVGRLRAFLHTGQEK
ADLAVLLKDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALNFGQQVSDTLSDCRKHLTWV
VAVLQEVAAAGAQMMSPLSEQDGLAAVKLEDVAFKAAEQIYGSQGANPFECLRQSCSIVI
ATMNKMATAMQEGEYDSDKPQSKNPPPVDLRAGALRAEITDAEGLGLKLEDRETVIKELK
KSLKIKGEELSEANIRLSLLEKKLDSSSKDADERVEKIQTRLDEAQTLLKKKEKEFEETM
DALQADIDQLESEKTELKQRINSQSKMTADGLRGSSPSGIASMVSGIAGEELKGNMMAGI
GPGSGVQVIDSPLLSQQIEAQRLCIKHLKNENNRLKAEKMRTQLASLPPLNVTKLPSKEG
RPEVLSSGLYRKTDQLLETLLQMSANVKVVDVTGKSPVTPSAQLLEQTARLQSLTETLDK
LKGEVAEHVVNLQPGARVSSDFATFPSTSFVKATEEKHSDTVLVGRVLVPCPRGQEQVHR
LVLSQSQLQRVHSLLQT
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagaccagaagaagcacatacacccggaccaccagcagcggcagcagcaggatg
agctctgatgggggcgggcggcccgccaaggtgggctccctggtggaggtgatcggcaag
gggcagcgcggcacggtggcctacatcgggaacacgctgttcgcctccgggaagtgggtg
ggcgtcatcctggacgaacccaagggcaagaacgacggcacggtgcagggcaagcgctac
ttcacctgtcaggagaactacggcatttttgtcaggcagtctcagatccagctggttgac
gacggcgctgacacctccccggagacccccgagccaaccgccggcagggtccccaaacga
gagatcctggagacgtccaagtctgccaaactgcgaggactgaagcccaaaaaggtgcag
catgtttccctaaactcgactcctacaacccggaagaccacggccagaaggcccaagcaa
cccagccgacctgcgggcggcggagggaagggggccgcgtccggctcggcgtcggcatcg
gccggcgagatgagcagcagcgagcccagcacgccggcgcagaccccgctggctgcaccg
gtcatcccgaccctccactctcctggaaacccgctggcccccggccccagcaaggaggag
gaggccctgcgcgctcaggtgaaggacctggacgagaagctggagacgctgaagatgaag
cgaacggaggacaaagccaagctgaaggagctggagaagcacaagatccagctggagcag
ctgcaggagtggaagaccaagatgcaggagcagcaggcggagctgcagaaacaactcaaa
gaggcaaaaagggaggctaaggaagccatggaggcgaaggagcggtacatggaggagatg
tcggacacggccgacgccatcgagatggcgactctggataaggagatggctgaggagcga
gcagagtctttacagctggaggtggactccctgaaggagagagtggaggagctcaccatg
gacctggagatcctaaagcacgagattgaggagaaaggttcggacggcgccgcctccagt
tatcacgtgaagcagctggaagaacagaatagcaggttaaaggaagctttggtcaggatg
cgcgacctgtccgcgtcggagaagcaggaacacgtgaagctgcagaagcagatggagaag
aaaaacacggagctcgattctcagagaggccagaaggaaaagctgcaagaggagatgaca
gcggcagaaaagacgatagacgagctgaaagagcaggtggacgcagctttgggggcggag
gagatggtggagatgctgacggagcgaaacctggatctggaggagaaagtgcgggagctg
agagagacggtcacagacctggaagctataaatgagatgaacgatgagctgcaggagaac
gccagagaaacagagctggagctgagggagatgttggacctgggagcggccagagtccgt
gaggctgagaaacgagttgaggcggcacaggagaccgtggcggattaccagcagaccatc
aagaagtaccgagagctgaccgctcacctgcaggaggtcaacagagagctgaccagccag
caggaggcctcagcggagctgcagcagcagccgccagcagagatgtttgacttcaagatt
aagtttgcggagacaaaagcttacgccaaggccatcgagatggagctgaggaagatggag
gtggctcaagccaacagacacgtgtctcttctgacctcctttatgcctgaatccttcctt
cgtcatgggggagaccatgactgcatcctggtcctgctgctcatccccagactcattcac
aaggctgagctgatcagcaaacaagcgcaggagaagtttgatctgaatgaaaactgtgtg
gagcgagtcggcctgaagggcggcgtcggtgagcagctgagctttgcaggcggtctcgtc
tactccctcagtctgcttcaagctactctccacaaatacgagcaagctttgtctcagtgc
agcgtagagatctacaagaaggtgggctctttgtacccagagatgagtgttcatgagcgc
tctctggattttctcattgacctgctgcacaaagaccagctggatgagacggtcaacgtg
gagccactcaccaaggccataaaatactatcagcacttgtacagcatccatctggcagat
cagagtgaggactgcactatgcagctggctgatcacatcagattcacccagagtgccttg
gactgcatggcagtggaggtgggccgcctgcgggcgttcctgcacacgggtcaggagaag
gctgacctggccgtgctgctgaaggatttggagacttcctgtagtgacatcaggcagttc
tgtaagaagattcgccgcagaatgccaggaacagatgcacccggtatccctgccgcactt
aacttcggacaacaggtctccgacacgctctccgactgcagaaaacacctgacctgggtg
gtggcagtattgcaggaagtggccgctgctggagctcagatgatgtctcctctcagcgaa
caggacgggctggcagcagtcaaactggaggatgtagcattcaaggctgcagaacagatc
tatggatctcagggtgccaacccctttgagtgtctgcgacaatcctgtagcattgtcata
gcaaccatgaataaaatggctactgccatgcaggagggagagtatgactcagacaagccc
caaagcaagaaccctccaccggtggatctgcgagctggagctcttcgagccgaaatcaca
gacgccgaaggtctgggcctgaagctggaggacagagaaacggtcatcaaagagctgaag
aaatctctaaagatcaagggagaagagctgagcgaagcgaacatccgtctcagtctgctg
gaaaagaagctggacagctcgtccaaagacgccgacgaacgcgtggagaagatccagacc
cggctggatgaggcccagaccctgctgaagaagaaggagaaggagttcgaggagaccatg
gacgccctgcaggcggacatcgaccagctggagtccgagaagacggagctgaagcagcga
atcaacagccagtcaaagatgaccgcggacggactgagaggcagcagcccatcaggaatc
gcttccatggtttcaggaatagctggagaggaactgaaaggcaacatgatggccggaatc
ggcccgggctccggcgtccaagtgatcgactctcccctgctgagtcagcagatcgaagcc
cagcggctttgcatcaaacacctgaagaacgagaacaaccggctgaaggcggagaagatg
cgcacccagctcgcctctctgccgccgctcaacgtgaccaagcttccctccaaggaagga
cgaccagaagtgctctccagcggcctctaccgcaaaaccgaccagctcctcgagactttg
ctgcagatgagcgccaacgtcaaggtggtggacgtcactggaaaatccccggtgacgcct
agtgctcagctcctggaacagacggcacgtcttcagtccctgacagagactctggacaaa
ctgaagggtgaggtagcagagcacgtcgtcaatctgcagcctggagctcgagtctcgtca
gactttgcaacgttcccttcaacctcctttgttaaggcaaccgaagagaagcactccgac
acggtgctggtgggtcgagtcctggtgccgtgtccccgcggtcaggagcaggtccaccgt
ctcgttctgtcccagtcccagctgcagagagtccacagtctcctgcagacctaa
DBGET
integrated database retrieval system
