Xiphophorus couchianus (Monterrey platyfish): 114134824
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Entry
114134824 CDS
T05908
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4
KO
K08740
DNA mismatch repair protein MSH4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114134824 (msh4)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Meiosis-specific proteins
Others
114134824 (msh4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
STING_LBD
Motif
Other DBs
NCBI-GeneID:
114134824
NCBI-ProteinID:
XP_027857440
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All DBs
Position
19:complement(16254585..16263756)
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AA seq
912 aa
AA seq
DB search
MYQSNTEEITGSETSDPGQTCGRSGLKEATASGYTSSCCPASLSSALPCRSSDVHTPSSS
HAPSQPGIASGQCQNGVRVGQPASLVLMSSSDTSSVRFPGGTPRLRRTPGSTGPTGTSVS
SVSTTSGASVIVAVVEGRGLARGEIGMASIDLKCPELVLSQFADTGTYAKVITRLHILMP
MEILMPDTASEKGKWTKLFKLITENFPGVNLTAIQRKYYNEKKGMEYIQQLCAPEFGTVL
MEVQAKYYCLATAAALLKYLEFIQSSFYAAKSLKVIFKGSEQTAMIDSASAANLELVVNN
RDNRSDYTLLGVLNHTKTPGGTRRLRSNILEPLLDVDTITTRLDAIQELLQNEELFFGLK
NAIGHFLDIDRLLSVLVQIPKQETAQAAESKITHVIQLKHTLDLVPQLREVLKTCNAALL
KAYSATLEDNRFDIILEQIKTVVNYDTTYLKGSLNMRTQKCYAVRPNINAFLDIARRVYT
EIVDDIAGLVNNLGEKYGFLLRTSFSTTRGFFIQMKLDGVVLPEGKLPPEFIKVTKQKNS
YGFTTADLIKMNGRCDEVLREIFHMSYVVICQLLTTIHEHIHCLYKLSDTVSMLDMLLSL
ANACTISDYVRPEFTDTLAIKQGRHPILERMARQQPVSNNTYISEGSNFVIVTGPNMSGK
STYLKQVALCQIMAQIGSFVPAEYASFRIADQIFTRIGVDDDFETNSSTFMLEMKEVSYI
IHNASDRSLTIIDELGRGTSAEEGIGICHSVCEFLLGLKAFTLFATHFLELCQLASLYPN
VENQHMEVQHTRNRDSGAEQVVYTYLLSRGCAEERQYGLRAAEMTSLPPSIIQEAKLVAC
KVSQQLLAKHPIDPETQRQRAVYHLATRLLQTARNSRLDPESLRMYLKGLKKQYETELQA
AAPARLSDTVEE
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagagcaacacagaggagataaccggcagtgagacctcagaccctggacaaacc
tgtggcagaagtggcctgaaggaagctaccgcctccggctacacctcgtcctgttgtcct
gcatctctctcctccgctctgccttgccgaagttcagatgttcacactcccagttcaagt
catgctccatcacagccaggaattgcctcaggtcagtgccagaatggcgtcagggtggga
caaccagcctcgttggttcttatgtcttcctcagacacttcctctgttcgctttcctgga
ggaacaccaagactcaggaggacaccaggatctacaggaccgacaggaacaagtgtctcg
tctgtttccacaacttctggtgcctctgtgatagtagcggtagttgaagggcgaggtttg
gccagaggagaaattggcatggccagtattgacttaaaatgtccagaactcgtactttct
cagtttgcagacacagggacgtatgccaaggtgataaccagacttcacatcttgatgccg
atggaaatcctgatgccagatacagccagtgagaaggggaaatggacaaaactcttcaag
ctcatcacagagaattttccaggtgtaaatctcactgcaatccagagaaagtactataat
gagaagaaagggatggagtacatacagcagctctgtgctccagaatttggcactgttcta
atggaggtgcaagcaaagtattattgcctagcaacggcagctgctttgctgaaatacttg
gagttcattcagagctcgttttatgctgccaagtctctaaaagtgatctttaagggaagt
gaacagacggctatgatcgactcggcctctgcagctaacttggagttggtggttaataac
agagacaacagaagcgactatactcttttaggagtactcaaccatacgaaaacacctggt
ggaacgaggaggctgcgctccaatattcttgaacctcttcttgatgtggatactataacc
acacgcttggacgccattcaggagctgctgcaaaatgaggagctcttcttcggcctaaag
aatgcaataggtcatttcctggacattgaccggctgctctccgtacttgttcagattcca
aaacaggaaacggctcaagctgctgaatctaagattacgcatgtcatccagctgaaacac
acactggatctggtgccacagttaagggaggtgttaaagacatgcaatgcagcgctgcta
aaggcatacagtgcaacgctggaggacaaccgatttgacataatccttgagcagatcaag
acggtggttaattatgacaccacatatttaaaaggaagcctgaacatgcggacccagaag
tgttacgcagtgcgacccaacatcaatgcgttcctcgacatcgcacgcagagtttacact
gaaattgtagacgacattgcaggtcttgtgaacaacttgggggagaaatacggttttctg
ttgcgcactagtttcagtacgacccggggattttttatccagatgaagctggatggagtg
gttttaccggaggggaaactacccccagagttcatcaaggtcaccaagcagaagaacagt
tatggctttaccactgcagacctgattaagatgaatggtcgctgtgatgaagtgctgagg
gagattttccacatgtcttatgtggttatatgccaacttcttacaaccatccatgagcac
atccactgcctgtacaaactgtctgacactgtatccatgttggacatgttgctctcgctg
gccaatgcatgcacaatctcagactacgtgcgtccagagtttacagacaccttggccatc
aaacaaggtcgtcaccccatcctggagcgaatggcccgacagcagcctgtctcaaacaat
acctacatctccgagggcagcaactttgtcatcgtaacaggaccaaacatgagcggcaaa
tctacatacctcaaacaggtggcgctgtgtcagatcatggcccaaataggctcttttgtc
ccagctgagtatgcctctttccggatcgctgatcagattttcaccagaattggtgttgat
gatgattttgagaccaactcttctaccttcatgttggaaatgaaggaggtgtcttacata
atccacaatgcgagtgacaggtcattgaccattatagatgaattggggcgtggcactagt
gctgaagaaggcattggaatctgtcactcagtttgtgagttcctccttggcctaaaggcg
ttcactctgtttgcgacacactttctggagctctgtcagctggcgtctctctatcctaac
gtggaaaaccagcacatggaggttcagcacacacgcaacagagactctggtgctgagcaa
gtggtgtatacatatctgctgagtcgaggatgcgccgaagaaagacaatacggtttgaga
gcagctgagatgacctcacttcctccaagtataatccaagaggcgaagttggttgcctgt
aaagtcagccagcagcttctggccaaacatcccattgatccagaaacgcagagacagaga
gctgtgtaccacctggcaactcgcctcttgcagactgccagaaattcaagactggatcca
gagagcctgcgtatgtatctgaaaggactgaagaagcagtatgagacggagctgcaggct
gcagctccagcaaggctcagtgacacagtggaggaatga
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