Xiphophorus couchianus (Monterrey platyfish): 114134826
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Entry
114134826 CDS
T05908
Symbol
atg2b
Name
(RefSeq) autophagy-related protein 2 homolog B
KO
K17906
autophagy-related protein 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04136
Autophagy - other
xco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114134826 (atg2b)
04136 Autophagy - other
114134826 (atg2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114134826 (atg2b)
03029 Mitochondrial biogenesis [BR:
xco03029
]
114134826 (atg2b)
Membrane trafficking [BR:
xco04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
114134826 (atg2b)
Mitochondrial biogenesis [BR:
xco03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
114134826 (atg2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
114134826
NCBI-ProteinID:
XP_027857443
LinkDB
All DBs
Position
19:15789558..15809866
Genome browser
AA seq
2074 aa
AA seq
DB search
MPWPFSESIKKRACRYLLHRYLGNFLQEKLSLDQLSLDLYQGTGSLAQVPLDKWSLNELL
ETADAPFEVIAGFIQTISLTVPWAALLQENCALEVKGLEMVLRPRPRAASGTEPMYWSSF
MTSSMQLAKECLSQKLTDDMGESFQPFEGLEKFAETIETVLRRVKVTFLDTVLRVEHIPE
NSKTGIALELRIRKIVYCDETGEESPSVNVHQPTTFAHKNMQMEGITVFWDEFSVVSRDC
RSSPTPPETEPKLSPSWNPKIICEPHPQFTEPLSSITPFETVQVGSLSGKIELSLTLKNN
LALPGAKLDVVGHIDKLLILLSPRQVHLLLDLFGAFSGGGAQEWNKDRKNRPMQQEDEYR
LHLELNRCLKKDTAVPGTDPDIFDSQTTRTVSSRDDVFFSMADMDMSHSLSSLPPLGEPP
TVDLDLSLNSNYSASPGESPSGNAAAMWDDYMDVPRQREKRTSESSAQSRDSQLPQKLPR
QTSHSSKTHGDESRPELVLKLSLSGFAVSVLHIDPLPPPHAAPSPVGPLAGHFFSAQGPG
QLSPDAFLQSRSMFDQACPHDHLRFVGQGLKINYEHCQGSNLRTFRTDISLSQMEFVECL
FPSEPPVGGNHRGIQYTELLTFETPVSDEASLSTCLHLLYKLAERRGPQAGQVRLSTIPR
KAEIRVELGPVRSELDISIVDRLNSLLQPQKLATTEMMASHLYTSYNKHISLHKAFAEVF
LDDTHTPSNCHISLTVNAPVLGLSVRFPIPDLRSDQERGPWFKKSLQKEVLLMELEDLEV
KTEFMGGSSPNQTKMELTFKELTGKFQEEPDQPAARFLRVSHNMEGDMMTSESVKFDWPR
VVLKMNPTTVHSILERVTAEDEGAEDHSLEEEEEEGAAHSLKDVCDFGKPEPSPFSSRKV
MYETEEMIIPGDVGEMTEFQEKTMNNSRFILELCFPNVQLALPGKTFYEKLHNRISNDLL
LWEPTAPSPVETIENMPYGVGLSVASQLINAYSKDSFSQFRSTGPEEETSGSEEENMHYY
SPASDLGFRSRKKKKPKAHSKTSQSLFSVILSVNHGLVALQTNSKEEDKSLLKNKHGEFW
IEVKNAVLFSVTQYEGFKDQHYICFHTSSVCMYQQGLLDGGINVLDIKLPCRTHPHWLEP
TVYQSETFSERSSTPSEGISLEARSMVSVAVKISSQSAERNLKEFLVAVGVRGATLQHRV
VPPNLGWYDQIVDFLNVSAEPVLGYAPPMSVTTLHLHLWSCSLDYRPLYLPLRSLVFVET
FSISSSVSLDNSSSTLRIILDEAALFLSDKNNMVSVNLARDYVQVVDMGTLELRITAVKP
GADGKLSEPRFELRCSSDVIHIRTCSDSCAALMNLIQYVASYGDLMPPEEPETKRNNTTQ
KNKAEVPSRPTSQIPLLAENELQILQDLMSEAMEETDGQQVPCPQQNGSYEEKTHDHDPP
RSDLFLFPDESGNLSQDTSPTYPILPSPLITPAPNLAQETDDFCILETPDSRGEDQDQEP
VVKQLTLDPVEIKDNHFSQPLEGNDSSRGAMNFPIPEVRYLIREISVIWHLYGGKDFGSS
ACIASPARSRGSTPHSSPSQTPVRQVKSLGRIGGGRGRNPDVLMEIQLSKVRFQHEVYPQ
TPVASRPAMDQPVSRQVFAVQDLEIRDRLATSQMNKFLYLYSSKEMPRKAHSNMLTVKAL
HTCPESGQAPPECSLRVSLMPLRLNIDQDALFFLKDFFSSLANEVEFFSPPAEETVCVTT
KKVAAPEISCSFSKQTAGSQDPAPIISVPAQRQISINSFSTSGREVANDAEASSSPFSDQ
PIFFREFRFTCEVPIRLDYHGKHVSMDQGTFAGIIFGLTQLNCSELKLRQLCYRQGLLGV
DKLFSYAINEWLNDIKANQLQGILSGVAPIHTLVKLVHGLRDLVWLPIEQYRKDGRIVRG
FQRGTASFGTSTAMAALELTNRMVRTIQAAAETAYDMVSPVPDERDTKRVKRYSHYGLAH
QPVDLREGVAKAYTVVKEGITDTALTLYDTATREHEQRGMTGAVGGVLRQLPPAVVKPLI
MATEATSNVLGGMRNQIHPDARQEESQKWRHEEE
NT seq
6225 nt
NT seq
+upstream
nt +downstream
nt
atgccctggccattttcagagtccatcaaaaagcgggcctgcaggtacctccttcatcgg
tacctggggaattttctgcaggagaaactaagcttggatcagctcagccttgatctttat
caaggcactgggtcccttgcacaagtaccattggataaatggtctctcaatgagctcctg
gagacggcggatgctcccttcgaggtaatcgcagggttcatccagacaatatctctgacc
gttccatgggcagcgctgctacaggaaaactgtgccctggaggtcaagggtttggagatg
gtgctaagaccaagaccgagagcggcttctggcactgagcccatgtactggtccagtttt
atgacgagcagtatgcagctcgccaaagaatgcctgagccaaaaactcactgatgatatg
ggagaaagctttcagccttttgaaggattggagaagtttgcagagacaatagaaacagtt
ttgagacgagtcaaagtgacgtttttggataccgttctccgagtcgaacacattccagaa
aattctaaaactggaattgcacttgaacttcgaatcaggaagattgtttactgcgatgaa
acgggggaagagagtccaagtgtaaatgtgcatcagccaaccacattcgcacataaaaat
atgcagatggaaggaatcactgtattctgggacgagttctcagtcgtgtctcgcgattgc
agatcctcacccacccctccggaaaccgagccaaaactttcccccagttggaatcccaaa
attatatgtgagccccatccacagtttacagagccgctttcctccataaccccctttgag
actgtgcaggttggaagcctcagtggtaaaattgagctgtccctcactctgaaaaacaac
ctagctctgcctggtgcaaagttggatgttgttggacacattgataaactgcttatcctg
ctctccccacgccaagtccatctactcttggatttatttggagctttttctggaggaggt
gcacaagaatggaataaggacagaaaaaatcgtcccatgcaacaagaggatgagtatcgt
ctccatttggagctgaaccgatgtctgaagaaagacaccgctgttccaggaacagaccca
gacattttcgacagccagaccaccagaactgtatcgagtcgagatgatgtgttcttctcc
atggctgacatggacatgtctcacagcttatcgtccctccctcctctcggagaaccgccc
actgttgacttggacttgtctctcaacagcaactactctgcctcacctggagagtctcca
tctggaaatgcagcagctatgtgggatgactacatggatgtaccgcgacaacgagagaaa
cggacgagtgaatcctctgcccagtcgcgggattcacagctccctcagaaactaccgaga
caaacctcccattcgtctaaaacacacggggatgaatcaagaccagagctggtgctaaag
ctgtcactgagtggctttgcagtctctgtcctccacattgacccgctgccaccgccacat
gccgcccccagcccagttggacccctagctggacattttttcagcgcacaaggcccgggc
cagctttctccagatgctttccttcagtctcgatcaatgtttgatcaggcttgtccccat
gatcatctaaggtttgttggccagggtttgaagataaactacgagcactgtcagggatca
aacctgcggactttcaggactgacatctccctgagccagatggagtttgtcgaatgtctg
tttccttctgagcctcctgttggtggaaaccacagaggaatccagtacactgagctctta
acatttgagaccccagtcagtgatgaagcatccctttccacctgccttcacttactgtac
aaactggctgagcgcagaggccctcaggcaggccaggttcgtctcagcacaataccaagg
aaagctgagatccgggtggagctgggtcctgtacgctccgagctggacatcagcatcgtc
gaccgtctcaactctctgctgcagcctcagaaattagcgaccacagagatgatggcctcc
cacttgtacacatcttacaacaaacacatcagtttgcacaaagcctttgcagaggttttc
ctggacgacacccacactccctccaactgtcacatatcactgacagtgaatgctccggtt
ctcggcctctctgtgcgcttccctatccccgacctgcgttcagatcaggagagaggcccc
tggttcaagaagtccctgcaaaaagaagttctgcttatggagctggaagacctggaggtg
aaaaccgagttcatgggcggaagctcacccaaccaaaccaaaatggagctcaccttcaag
gaacttactggaaagttccaggaggagccggatcaacccgctgcccgtttcctcagggtt
tcccacaacatggaaggagacatgatgacatctgaaagtgtaaagtttgactggccaagg
gttgtcctgaagatgaatcccaccacggtccattcaatactggagcgtgtgacggctgaa
gatgaaggggctgaggatcattcacttgaggaagaggaggaggaaggggctgctcattcg
ttgaaggacgtgtgtgactttgggaaaccagagccgtcgcccttttcttcacgcaaggtt
atgtatgagactgaggagatgatcattcctggtgatgttggtgaaatgacggagttccag
gaaaaaaccatgaacaactctcgcttcatcctggagctgtgtttccctaatgtgcagctg
gcactgcccggcaagactttctatgaaaaactacacaacagaataagcaatgaccttctg
ctgtgggagcccacggccccgtccccagtggaaaccatagaaaacatgccgtatggagtt
ggactctctgttgccagccagctgattaatgcatactccaaagacagtttcagccagttt
cgctctactggccctgaggaggagaccagtggctcagaggaggagaatatgcattactac
tctcctgcctcggatctgggcttcagatctcgaaagaagaaaaagcccaaagcgcacagc
aaaacctcccagagcctcttttctgtcatcctctctgttaatcatgggttagtggcgctt
cagacaaactccaaggaagaagataaatctttactaaaaaacaaacatggggagttctgg
attgaagtgaaaaatgctgttttgttcagcgtcactcagtatgaaggcttcaaggaccaa
cactacatttgctttcacaccagcagcgtttgcatgtaccagcaaggactcctagatgga
ggcatcaatgtcttagacatcaagttgccgtgcaggacacatccccactggctggagccg
accgtctaccaatcagagactttttcagaaaggtcctcgaccccctcggagggtatcagc
ctggaggcccggagcatggtgtcggtcgctgtcaaaatctcatcacagagtgcagaacgc
aacctcaaggagtttctggttgctgttggagtgagaggagccacactgcagcacagagtg
gtgccacctaatctgggctggtatgatcagattgttgactttctgaatgtttcggctgag
cctgtgttgggttacgcccctcccatgtctgtcaccactctacatttacacctttggagt
tgctcattagactacagacctctctacctgccactcagatctttggtgtttgtagaaaca
tttagcatctccagcagcgtctccttggacaattcatcttcaaccttaaggataattttg
gatgaagctgctctgttcctctcggacaagaataatatggtttctgttaatcttgcgcgg
gactatgttcaggttgtagacatggggacactagagctgaggattacagctgtcaaacct
ggagcagatggaaaattgtcagaacccagatttgagctgcgctgctccagtgatgtgatc
cacatcagaacgtgttcggactcctgcgctgccctgatgaacctcatccagtatgtggcc
agctatggggacctgatgcccccagaggaaccggagaccaagcgcaacaacaccacacaa
aaaaacaaggcggaggttcccagcagaccgacatctcagatcccgctgcttgctgagaat
gagctgcagattctgcaggacctgatgagtgaagctatggaggagacggacgggcagcaa
gtgccgtgcccgcaacaaaatggttcctatgaggaaaagactcatgaccacgacccaccc
cgctcagacctgttcctgttccctgatgagagtgggaatttaagccaagatacaagtccc
acgtaccccattcttccctctccgctcattacgcctgcacccaacctggcccaagagacg
gatgacttttgcattttggaaactcctgattccagaggagaggatcaagaccaggagcct
gtggtaaagcagctcaccttggatccagttgaaatcaaagacaatcacttcagtcagcct
ttggaagggaatgattccagtcgtggagccatgaattttcccatcccagaggtccgctac
ctcattagggagatttctgtcatctggcatctttatggaggaaaagactttgggagttca
gcatgcattgcttcacctgctcgaagccggggatctactcctcatagctccccatctcaa
actccagttagacaagtgaagagtttgggccgtattggaggaggaagaggaagaaaccct
gatgtcctgatggagatacaactcagcaaggtgagatttcagcatgaggtgtacccacag
acccctgtagcatctcgtccagccatggaccagccagtgtcccgccaggtgtttgctgtg
caggacttggagattcgggacagacttgctacctcacagatgaacaagttcctatacttg
tactctagcaaggaaatgcctcgaaaagcccattcaaacatgttgacagttaaggctttg
catacgtgtcccgagtcaggccaggcgcctcctgagtgctccttgcgtgtttctctaatg
cctcttcgcctcaatattgatcaggatgcgctgttcttcttgaaggatttctttagtagt
cttgcaaatgaagtggagtttttctcccctcctgctgaagaaactgtttgtgttacgaca
aagaaagtcgctgccccagagatctcctgcagcttctccaaacagactgctggcagccag
gatccagccccgatcatttcagttcctgctcagaggcagatcagcatcaatagtttctca
acgtcaggcagggaggtagcaaatgatgccgaagcttcttcctctcctttttcagaccaa
ccgatcttcttcagagaatttcggttcacttgtgaggttccaattcgactggattaccat
gggaaacatgtatcgatggatcagggaacatttgcagggatcatctttgggctgacacag
ctaaattgttcagaactaaaactgcggcagctctgctatagacaaggattacttggtgtg
gacaagctgttttcctatgcaataaatgagtggctaaatgacataaaggccaatcagctt
caaggaatcctaagtggtgtggcaccgattcacactctggtgaaactggttcacggcctg
agggacctggtgtggctccctattgagcagtacagaaaggacggccggatagtccgggga
tttcagcgtggcacagcctctttcgggacctccacagccatggctgctttggagctcaca
aacaggatggtgcggaccatccaggcagcagctgagacagcttatgacatggtttctcca
gtacctgacgaaagagacacaaagagggtaaaacggtactcccattatggccttgctcat
cagcctgtggacctgagagaaggtgtagccaaagcttacactgtggtgaaagagggcatc
acagacactgctcttactctttatgacacggcgacgcgggagcacgagcagcgtgggatg
acgggagcggtcggtggagtcctccgccagctgccaccagctgtagtcaagccactcatc
atggccactgaagccacgtctaacgtcttgggtgggatgaggaaccagattcaccccgat
gcgcgtcaggaggagtcacagaaatggaggcacgaggaggagtga
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integrated database retrieval system
