Xiphophorus couchianus (Monterrey platyfish): 114134914
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Entry
114134914 CDS
T05908
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04260
Cardiac muscle contraction
xco04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114134914
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
114134914
04261 Adrenergic signaling in cardiomyocytes
114134914
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114134914
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
114134914
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
VWA_3
dCache_1
VWA_2
MCP-like_PDC_1
VWA_CoxE
WAK_assoc
dCache_2
Motif
Other DBs
NCBI-GeneID:
114134914
NCBI-ProteinID:
XP_027857581
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Position
20:16032896..16071800
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AA seq
1145 aa
AA seq
DB search
MEGICRIQVLHTFLLLWIFIGWNVATVAGSQQGIPLSVVKLWASAFGGEIKSISAKYSGS
QLLQKELWSITAPRPGANSTSEASPPIRATSRLNPKITAACLWEESGGQRGSPRKYGESV
QTAFRKRLQAQNPGLSCPEKYKEPEKSVRVEEIDGVKLVKDLAVKMEEMFQRKAEATRRL
VEAAEEAHHQHEDNPDLQFEYFNAVLINEVGEDEKPVELGGEFLLEPNDHFNNLSVNLSL
SVVQVPTNMYNKDPDIMNGVYWSEALNKVFVENFERDPTLIWQYFGSAKGFFRQYPGVKW
NPDQSISFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDNDF
FNIIAYNQEIHYVEPCLNGTLVRADTTNKDHFREHLDKLFAKGIGLLGEALTEAFTILND
FNQTGHGSVCSQAIMLVTDGATKMYDDVFEKYNWPDRKVRIFPYLIGRESAFADNLKWMA
CANKGYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYADSALRGKSGPALTT
TVAMPVFSTKNETKNQGILLGVAGTDIPLQELMKLIPKHMLGIHGYAFAITNNGYILTHP
DLRPLYQEGQRRRKPYYSSVDLSEVEWEDKDDILRNAMVNRRTGTFSMDVKRTVDRGRRV
LKMHNDYYYTDIKGTPFSVGVALSRGHGKYFFRGNVSMDAGLRDLEQPDVALADEWTYCN
TEEKHEHRHLTQIQAIKLFMTGRRTHLKCDRELIQEVLFDAVVTAPLKSYWNSLALNKSE
NPDKGVEIAFLGTRTGLSRTNLFVPTAQNFLTAEDEEGVFNADHFPLWYRRAAEQVPGTF
VYSIPFSTASESVVLASTAIQLLDDRKSPIVAAVGIQMKLEYFQRKFWTACRQCTALDGN
CIISCDSEDINCYLIDNNGFILVTEEKSQTGLFFGEVEGAVMSKLLQMGSFKRINLYDYQ
ALCREYAGSSDSARTLSDPFSMVKWLLTELVIFLLEFNLYSWWNVDLSVKAQRPQGKTMT
VPCDTEYPAFVSERTIKETTGNVDCGGCVSSFVIQQIPSSNLFMVVVDNKCDCGTVDPVT
MDPIEIKYNESLKCDRLKLQKDRKKPESCHPFHPEENAMECGSASRLSSCLAVNLLTLIA
ATVSR
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggagggaatctgcaggatccaagtcttgcacacgtttcttcttctctggatcttcatc
ggctggaacgtagcgacggtggcaggatctcagcaaggaatccctctgtcagttgtaaag
ctttgggcctctgcatttggcggagaaatcaaatcaatttctgcgaagtactctggctcc
cagctattacaaaaggagctgtggtccattacggcgccacgtccgggggccaactccact
tctgaggccagtccccccatcagggccaccagcaggctgaaccctaagatcacagctgcc
tgtctttgggaagaaagtggagggcagcgaggaagtcctcgaaaatacggagaaagtgtc
caaacggcgtttaggaagcgtctccaagcccaaaacccaggactctcctgcccagagaaa
tataaagagcccgaaaagtcggtcagagtggaggagattgacggcgtgaagctggttaaa
gatctggctgtgaagatggaggagatgttccagagaaaagcagaggccaccaggcggctg
gtggaggctgcggaagaagcgcaccatcagcacgaagacaacccagacctgcagtttgag
tacttcaatgctgtgctgatcaacgaggtgggcgaagacgagaaacccgtggagctgggg
ggagagttcctcctggagcccaatgaccatttcaacaacctttcagtcaacctgagcctc
agtgtggtgcaggtgcccaccaacatgtacaataaagatccagatatcatgaatggggtc
tactggtcggaggccttgaacaaggtgtttgtagaaaactttgaaagagatccaacactt
atctggcagtactttggaagtgccaaaggtttcttcagacagtaccccggagtaaagtgg
aatccagaccagtcaatcagcttcgactgcagaaatcggaagtggtacatccaggcagcc
acgtctcctaaggatgtggtgatcctagtggatgttagcgggagcatgaagggtctgagg
ctcacgatcgccagacaaacagtttcctccattttagacacactgggagataatgacttc
ttcaacattattgcttataatcaggagatccactatgtggagccttgtttgaatggtacg
ttggtccgagccgacacaaccaataaagaccatttccgtgaacatctggataagctgttt
gccaaagggattgggctgctgggcgaagctctgactgaggccttcacaatcctgaatgat
tttaatcagactggacatggcagcgtgtgcagccaggccatcatgcttgtgacggacgga
gctacgaaaatgtatgatgatgtttttgagaagtacaactggccagacagaaaagtgcgc
atattcccctacctgattgggcgagagtctgcatttgcagataacctgaaatggatggct
tgtgccaacaaagggtattttagtcagatctccactctagccgatgtccaggagaatgtg
atgaggtatcttcacgtcatgagccgtccaaaggttatcgatcatgaacacgatacggtg
tggactgaagcgtacgcggacagtgctcttcgcggtaaatcaggtccagctctgacgacg
acagtagcaatgccagtgttcagcacaaagaatgaaacgaagaaccagggtattctgctg
ggagtcgctggcacagacatccctctgcaggagctgatgaagctcatcccaaaacatatg
ttagggatccatggatatgcttttgcaatcacaaataatggctacatcctgacgcatccg
gacctcaggcctttgtatcaggagggacagaggaggaggaagccttattacagcagcgtg
gatctctctgaggtggagtgggaagacaaggacgacatcctacgtaacgccatggtaaac
aggaggacggggactttctctatggacgtgaagaggaccgtggaccgagggaggcgtgtt
ctcaagatgcacaacgactattactacaccgatatcaaaggaactccattcagtgtcgga
gttgctctctcaagaggccacggaaagtatttcttcagaggaaatgtatcgatggatgca
gggctccgtgatctggaacagccagatgtcgccctggcagatgaatggacctactgcaac
acggaggagaagcacgagcaccgccacctgacccagattcaagccataaagctcttcatg
actggccgcagaacacacctcaaatgtgacagagagttgatacaggaagtgttgttcgac
gctgtcgtcacggctccactgaagagctactggaacagcctggctctcaacaaatcagag
aacccagacaaaggggtggagattgcattcctgggcacacggactggtctgtccagaaca
aacctgtttgtaccaactgctcaaaatttcctgacagcggaggacgaggagggtgtgttt
aatgctgatcacttccccctgtggtacaggagagcggcagagcaggtcccaggcacattt
gtctactccatccccttcagcacagcttctgagagtgtggtgttggccagcacagcaatt
cagctcctcgatgacagaaaatctcccattgttgctgccgtggggatccaaatgaagctc
gagtattttcagagaaagttctggactgcctgcagacagtgcacagctctggatggaaat
tgtatcattagctgtgatagtgaggacattaactgctacctcattgacaacaacggcttc
attcttgttacagaggaaaaatctcagacagggcttttctttggagaggtggagggcgct
gtcatgagcaaacttctccaaatgggctcctttaaaagaatcaacctctatgattaccaa
gcgctttgcagagagtacgccgggagcagcgacagcgcacgcactttatcagatcctttc
tcaatggttaagtggctcctgacagaacttgtcattttcctgctagaattcaacctgtac
agctggtggaacgtcgacctctcagtcaaagctcagaggcctcagggtaaaaccatgacg
gtgccttgcgacacagaatacccagccttcgtctccgaacgcaccattaaggagacaaca
ggcaacgttgactgcggtggttgtgttagttcttttgtcatacagcagattcccagcagc
aacctgttcatggttgtagttgacaacaagtgcgactgcggcaccgttgatcctgtaaca
atggatcccatcgagatcaaatacaacgagtcactaaaatgtgacagactaaagctgcag
aaggacaggaaaaagcctgagtcatgtcatcctttccaccctgaggaaaatgccatggag
tgcggctcagccagtcgcctctccagctgcctggctgtaaatctgctgactctgattgca
gcgaccgtcagcaggtga
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