Xiphophorus couchianus (Monterrey platyfish): 114134915
Help
Entry
114134915 CDS
T05908
Name
(RefSeq) parapinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
xco04030
]
114134915
G protein-coupled receptors [BR:
xco04030
]
Rhodopsin family
Vision
Opsin
114134915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7tm_4
Serpentine_r_xa
TAS2R
Motif
Other DBs
NCBI-GeneID:
114134915
NCBI-ProteinID:
XP_027857582
LinkDB
All DBs
Position
20:complement(16024355..16027275)
Genome browser
AA seq
340 aa
AA seq
DB search
MQPPALLPNASFYMDPPEEPPLSRAGFIVLSVIMAFFTIPAIVLNGTVIIVSLMHKQLRQ
PLNYALVNMAAADLGTAMTGGVLSVVNNAQGYFSLGRTGCVMEGFTVSLCGITSLCTVAL
IAVERMFVVCKPLGQVTFQKKHAIGGIVLSWLWSLAWNLPPLFGWGRYDLEGVGTSCAPD
WHNTDPNNVSYLIAYFAVCFAFPLTLILVSYAKLLWTLHQVSKMACVEGGAVAKGEMKVA
SMVILMVLSFLAAWLPYAGLAMFVVCRPDAKIHPLVGTLPVYLAKSSTAYNPIIYILLNK
QFRKYAVPFLLCGKELVEEDEASEATTTVEAMSTNKVAPS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcagccccctgcgcttttaccaaatgcttcgttctacatggatccaccggaggagccc
cctctgtcacgagcgggcttcatcgtactctccgtcatcatggccttttttactattcct
gccattgtgctgaacggtacagtgatcatcgtgtccctcatgcacaagcagctgaggcag
ccgctcaactacgctctggtgaacatggccgcagccgacttgggcacagcgatgaccggg
ggggtgctgtcggtggtcaacaacgcccaggggtacttctctctgggcaggacaggctgt
gtgatggagggcttcactgtgtccttgtgtggcatcacatccctgtgcacagtggctctg
attgcagtggagaggatgtttgtggtgtgcaagcctctgggacaagtaaccttccaaaag
aagcatgccatcggaggtatagtcttgtcttggctctggtctcttgcctggaacttgccc
ccactcttcggctggggcaggtacgatctggagggtgtcgggacgtcctgcgcaccagac
tggcacaacacagaccccaacaatgtctcctacctcattgcttactttgctgtgtgtttt
gcctttcctctcactctgatcctggtctcatatgcaaaacttctctggacgttacaccag
gtttcaaagatggcctgtgtggaaggtggagcagtagctaaaggggagatgaaggtggcg
tccatggtgattctgatggtgctgtccttcctggcagcctggctgccgtacgccggtctg
gccatgtttgtagtctgcagacctgatgcaaagattcatccgctggtgggcacgctgccg
gtttacctggcaaaaagcagcactgcgtacaatcccatcatctatatcttgctcaacaaa
cagtttcgtaagtacgcggttcccttcctgctttgcgggaaggagttggtggaggaagac
gaggcgtcagaggcaacaaccaccgtggaggccatgtctacaaataaagtggctcccagt
tga
DBGET
integrated database retrieval system
