Xiphophorus couchianus (Monterrey platyfish): 114134931
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Entry
114134931 CDS
T05908
Symbol
ppfibp1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114134931 (ppfibp1)
Membrane trafficking [BR:
xco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
114134931 (ppfibp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
Phage_portal_2
Motif
Other DBs
NCBI-GeneID:
114134931
NCBI-ProteinID:
XP_027857607
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Position
2:complement(17871025..17891820)
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AA seq
993 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALDYSNGLFDCQSPTSPFMGSLRALHLLEDLRSVIE
LMDTEERESLRCQIPDSTADSLVEWLHGNLSNGHISLGGGDHYQERLSRLEGDKESLVLQ
VSVLTDQVEAQGEKIRDLDICLDEHREKLNATEEMLQQELLCRTALETQKLDLMSEVSNL
KLKLNSLDKERLDFDRFRDSEDFILEINELRYRLTELDSEKLQYEKKLKSTKSIMAKFSS
MKIKMGQMQYEKQRKEHKLQSLKEELSSLRRQLEGKDGEMRRLQDDTAFKLVATSSHDGL
ERVSHPDETLRKRLKEKHVEVQRMKKAVESLMAANEEKDRKIEELKQSLLRYKKVQDMVM
SVQGKKEKTKDVERLESPGDGSSLLLSGSSGSVESEKQDITDVEELQTKKPDEPERLSGL
SEDSSPSPSPADPVRLSEHAQTEGQSNYELSKNDGQVQLEDSNNEMSTSEENSKMSEKPP
MNPSATLPASIIDDSFGSRKARSSFGKGFFKIRGGKKTSSSPNLDRSRSASAPMLAETER
QGTDHLDLAGVPQRSSNSDSTHTLPTTPESRKKSKGIKKLFGKLKRSQSTTFNLDDNLPE
GEFKRGGVRATAGPRLGWSRDFQRVNNEVDAPFARWSKDQVCDWLQEQGLGLYVNMARVW
IHSGQTLLQASQQDLERELGIKQQLHRKKLQLALQALGSEEEDNKGKLDYNWVTRWLDDI
GLPQYKTQFDEARVDGRMLHYMTVDDLLSLKVGSVLHHLSIKRAIQVLRLNNYEPNCLRR
RPSDEKNISPAEISQWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVEAMAL
LLNIPPNKTLLRRHLATHFSLLIGSEAQQLKQECLENPDYTLLTATTKVKPRKLSFGNFG
MRKKKQEENEEYVCPMDVEMPKGRSFQKGFELQIYEDDLDRLEQMEDSEGTVRQIGAFSE
GIQNLTSMLKDDEFFKEMSNSPNPGVTDEESNA
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagcgacatgttggcggctgccttagagcagatggatgggataata
gcaggctcgaaggccttggactattccaacggtctgtttgactgtcagtcgccaacctct
ccgttcatgggaagcctacgggcgctccacctattggaggacctgcggagtgtgattgag
ttaatggacacagaggaaagggaaagtctccgctgccagatccccgactccaccgctgac
agtctggtcgagtggcttcatggtaacctgtccaacgggcacatctctctgggtggaggt
gaccactaccaagaaaggctgtcaagattagaaggcgacaaggagtctctggtgcttcag
gtgagtgtgctgactgaccaggtggaggcgcagggagagaagattcgcgatctggacata
tgtttggatgagcacagggagaaactcaacgccacagaggagatgctgcagcaggagctt
ctgtgcagaacggctctggagacgcagaaactcgatctgatgtctgaagtgtccaacctc
aagttgaagctcaactctttggacaaggagagactggactttgaccgatttagggacagt
gaggattttattcttgaaattaatgaacttcggtacagattgacagagctggacagtgaa
aaactgcagtatgaaaagaaacttaagtccacaaagtccattatggctaagttttctagc
atgaaaatcaaaatgggccagatgcagtatgagaaacagaggaaggagcacaaactccaa
tctctgaaggaggagctgtcgtctttgaggaggcagctggagggcaaagatggtgaaatg
aggagactacaggatgacacggccttcaaacttgttgccacaagtagccatgatggccta
gaaagagtgtctcatccagatgaaacgcttagaaagaggctgaaagaaaagcatgtggaa
gtgcaaagaatgaaaaaggcagttgaatcactaatggcagcaaatgaagaaaaggatcgt
aagatagaggagctcaaacagtcgcttttgcggtacaagaaagttcaagacatggtgatg
tcggtacaagggaagaaagagaaaacaaaagatgtcgagcggcttgagagtcctggtgat
ggatccagtctgctcttgtctggcagctctggctctgtggaatctgaaaagcaagacatt
acagatgttgaagagctgcaaacaaagaagccagatgagccggaaagactcagtggactg
agtgaagactcgtcgccctctcccagcccagctgatccagttcgactatcagagcacgca
cagacagagggccaaagtaattacgaactgagcaaaaatgatggccaggtccagttagaa
gacagcaacaatgaaatgtctacaagtgaagaaaacagtaaaatgagtgaaaaaccacct
atgaatccctctgccaccttgcctgcctccatcatagacgacagctttggttccagaaag
gctcgctcatcttttgggaaaggtttcttcaagatccgcggagggaagaaaacatccagc
agccctaacctcgaccgcagcaggagtgcaagtgcgcctatgctagctgagacagagcga
cagggcaccgaccatctggacctcgccggagtgccacagaggtcatccaacagcgacagc
acacacacgcttcctacaacgccagaaagcaggaagaaatccaaaggcataaaaaaactc
tttgggaagctaaagcggagtcagtcgaccacatttaacctggatgacaacctcccagag
ggagagttcaagcgaggcggagttcgagccacagcgggacccagactgggttggtctcgt
gatttccagcgagtcaacaatgaagtggacgctccgtttgcgcgctggtcaaaggaccag
gtctgtgactggctgcaggagcagggcctgggcctttacgttaacatggcccgtgtgtgg
atccactcgggacagactctgctgcaggcgtcgcagcaagaccttgagagggagctgggc
atcaagcagcagctgcacagaaagaagctgcagctcgctttgcaggccctaggctcagag
gaggaagataataagggaaagctggactacaactgggtgactaggtggttggacgacatc
ggtcttcctcagtataaaactcagtttgatgaagccagagttgatggtcgaatgcttcac
tatatgaccgtggacgacctgctctccctgaaggtgggaagtgtcctgcatcacctcagc
atcaagagagcaattcaggttcttcgactcaacaactacgagcccaactgtttgcgccgc
agaccatcagatgagaaaaacatttcacctgcagagatttcccagtggaccaaccacagg
gtgatggagtggcttcgatctgtcgacctcgccgagtacgctcccaacctcagaggcagt
ggcgtccacggaggcctgatggttctggagccccggttcaatgtggaggccatggctctg
ctgctgaacatcccccctaataagactctgctgcgtcgccacctggccacacatttcagt
ctgctgattggctcagaggcccagcagctcaaacaggaatgtctggagaacccagactac
actttgctcactgccaccactaaagtcaagccaaggaagttgtcatttggtaactttggg
atgaggaagaagaagcaggaggaaaatgaggagtatgtgtgcccaatggatgtggagatg
ccaaaaggtcgaagcttccagaaaggctttgagctccagatctatgaggacgacctggac
aggctggagcagatggaggactctgaggggacggtgagacaaatcggggccttctctgag
ggaatccagaacctgacgagcatgctgaaagatgatgaattctttaaagagatgtcaaac
tctccgaaccccggcgtaacggatgaggaatccaacgcatga
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