Xiphophorus couchianus (Monterrey platyfish): 114135015
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Entry
114135015 CDS
T05908
Symbol
cfap57
Name
(RefSeq) cilia- and flagella-associated protein 57 isoform X1
KO
K24729
cilia- and flagella-associated protein 57
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xco03037
]
114135015 (cfap57)
Cilium and associated proteins [BR:
xco03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
114135015 (cfap57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
Beta-prop_EML
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_HPS5
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
114135015
NCBI-ProteinID:
XP_027857721
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All DBs
Position
20:29146541..29162215
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AA seq
1148 aa
AA seq
DB search
MSTVFSQPHFIFGLRKGVKNNLCFVDEQTVVFPSGNSCVIHNTVKRWQRFIPGLEGSLGL
RALALSPNQRYLAVSEKAEKASVTVFDLHQEHGLKRNVLTAGDFLVQEFLSLAFSPDSKY
LIGQSGAPEWLLIFWSWEKNKLLATEKTTNSNNPISQISFSPHNNMQVCVSGNGIFKLFR
YSEGNLKQNSIAKVGSINILCHTWLSEDRVIAGTDTGRLLVSQSGDVRREIKMCSEAAQG
QNERNLEVRRIKAGNVTEGVAKCGITAILSYSKGFVCSTGPGTVSLFEKIEDNVYRKSRE
IQILPAPASSDSAPARCQEIDTMCMSPAEETLAVSTDRGQLYSINLSSAEMKREEQLPFD
FLSQPFHSASITGLSICIRKPFMATSSLDCSVRIWNYETKELELYKEFREEAFSVALHPT
GLFVLVGFSDKLRLMNLFIDDIRTFKDFALPGCRECAFSHGGHMFAAVDKSVIHIYSFTS
FENILNLNGHFGKVRTVEWSFDDSRLVSCGADGAVYEWNTHTGKLECETVLKACSYFGAA
FSWDYKTVLAVGTDLILREIQDCQVLREVPADAVAHTALAVSQSGRVVFTGTARGTVRAV
TYPLPDQKEWITQQAHCGPVTRMVITYDDQFLLTASEDGCLLISKIVDQKGRGLRSNRQI
VHTEEILVTKADLKERAHNMLELKMHLEELHMEKEYQLRLQDMNYKEELQQMSNKFTEEI
KSLKTTQQILSTEIEQCEQETQLNSAEVEVKHCKDLKDLDQFYTSKLTVEHEKYEDLLQK
HKEMQEEYETRLIHAHGDRTQNLAEVTQMYEAKLQAKTQQMNKCQKEAELRIREYEETIR
QTAEQEQQKIYTMKDKYEKQLQSEKEAITKLKGNSGTMTQKVHNLQKQIDDRLSDITSLK
KERHTLMGFIRTLETDICVLKKQVSKYKKICQEKDKIISSLHIINQDLQKLKIILEFKLK
DMKKQIKPQQVDINEKAERIQKLEEELILITNSSTRLKVTISELRLRLRTKDKEIQKELQ
RVQDLTTLLERVRSDLQVCASLIQDPRKLKDNILMIYFRYASGTESAKRSSAVDDAQKGM
CSQCGQLEMTVSSLQKKLVRSAKEHEDVYTRMMKDNMALVTEINELRKALHAERSKEKDS
KVQQGLLQ
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgtgttttctcagccccattttattttcggcctccggaaaggcgtgaagaac
aacttgtgttttgttgacgagcaaacggtggttttccccagcgggaacagctgtgtgatc
cacaacaccgtcaaaagatggcagcgcttcattccaggtttagagggaagccttggccta
cgcgctttggctctaagtccaaaccagcgctacttggcagtatcggagaaggctgagaag
gcctccgtcaccgtgtttgaccttcatcaggagcacggcctgaagagaaacgttctaact
gcaggagattttctagttcaagagttcttgtccttagctttctctcctgattccaagtac
cttatcggtcaaagcggagccccagagtggttgttgatcttctggagttgggagaaaaac
aaactcttggcaacagagaagacaaccaactctaataatcccatttcacagatcagcttc
agtcctcataacaacatgcaggtctgtgtgagtggcaacggcatattcaagctgtttcgg
tactcagaaggcaacctgaaacagaacagcatcgcaaaggtggggtcaatcaacatcctg
tgtcacacctggttgtcagaagaccgagtcatagcggggacagacacaggaaggctgctg
gtgtctcagtctggggacgtgaggagggagatcaagatgtgctctgaagctgcgcagggc
cagaatgagaggaacctggaagtgagacgaatcaaagcggggaatgtgacggaaggcgtg
gccaagtgtggcatcactgccatcctgtcctactccaagggttttgtgtgctccaccggt
ccgggcacagtctctctgtttgaaaagatagaggacaacgtctatagaaaaagcagagag
atacagattctcccagctccagccagcagtgactcagctccagcccggtgtcaggagata
gacaccatgtgcatgagtcctgcagaggagacgctggctgtcagcacagaccgaggccaa
ctgtacagcattaatctttcatctgctgaaatgaagcgggaggaacaactaccttttgac
tttttgtcccagcccttccactctgcctccattactggtttgtccatctgcatccgtaag
cccttcatggccaccagctctttagattgctccgtacggatctggaattacgagacgaaa
gagttggagttgtacaaagagttccgagaggaggcgttcagcgtggctctgcaccccacg
ggcctctttgtgctggtgggcttttcagacaaactccggctgatgaacctgtttatcgac
gacatccgtacctttaaagactttgcgctgcccggctgcagagagtgtgccttcagccac
ggtggccacatgtttgcggccgtcgacaaaagcgttattcacatctactctttcacctcg
tttgagaacattctcaatctaaacggccactttgggaaggtgcggaccgttgagtggagc
tttgacgacagccggttggtgtcttgtggggcagacggcgccgtgtacgagtggaacacc
cacaccgggaagctggagtgtgagactgtgctcaaggcctgcagctacttcggcgcggct
ttctcctgggactacaagaccgtcctggctgtaggaacggacctcatcctgagggagata
caggactgccaggtgctgcgggaggttcccgctgatgcggtggctcacaccgctcttgcc
gtgtctcagtccggtagggtcgtcttcaccggtaccgcccgcggaaccgttagagccgtt
acataccccttacctgatcagaaggagtggatcacacagcaggctcactgcggccccgtc
accaggatggtgataacctacgacgatcagttcctgctgacggcgtccgaagatggctgc
ctgttgatatccaaaattgttgaccaaaagggtcgaggtctgaggagcaacaggcagatt
gtccacaccgaagagattcttgttacaaaggcggacctgaaggaaagggctcacaacatg
ttggagctgaagatgcatctggaggagctgcacatggagaaagagtaccaactccgcctg
caagacatgaactacaaagaggagctccaacaaatgtcaaacaagttcacggaggaaatc
aagtctctgaaaacaacacagcagatcctgagcacggaaatagagcagtgtgaacaagag
acccagctgaattctgcagaagttgaagtgaaacactgcaaagacttgaaggatctagac
caattctacacctccaagctgactgtggagcatgaaaagtacgaagaccttctccagaag
cacaaagaaatgcaggaggagtacgagacgcggttgattcatgcacatggggaccggacc
cagaatctggccgaggtcacgcagatgtacgaggccaagctgcaagcgaagactcaacaa
atgaataagtgtcagaaggaggctgagctaaggatccgagagtatgaagaaaccataagg
cagacagcagagcaagagcagcaaaagatctacaccatgaaagacaagtacgagaagcaa
ctccagtcagagaaagaggccatcaccaagctgaagggaaacagtggcactatgacacaa
aaggtccacaatctccagaagcagatcgatgaccgcttgagtgacataacctccctgaag
aaggagcgccacactctgatggggttcatccgcactctggagaccgatatttgtgttctg
aagaaacaggtttccaaatataaaaagatctgccaggaaaaggacaaaatcatatccagc
ctacatattataaaccaggatctgcagaagttgaagatcatcttggaattcaagctgaag
gacatgaagaagcagatcaagccacagcaggtcgacataaacgagaaagcagaaaggata
caaaagcttgaggaggagctcatactgatcaccaacagcagcactcgtctgaaagtcacc
atatctgaactgaggctcagactgaggaccaaagacaaagaaatccaaaaggagttgcaa
agggtgcaggatttgactacgcttcttgagcgggtcaggtcagacctccaggtttgtgcc
tccctcatccaggatcccaggaaactgaaagacaacattttgatgatatacttccgatac
gcctcaggcacagagagtgcaaagaggagcagtgcagttgatgatgctcagaagggtatg
tgctcccaatgtggtcaactggagatgactgtaagcagtcttcagaagaagctggtcaga
tctgccaaagagcacgaggatgtctacaccaggatgatgaaggacaatatggctcttgtt
accgaaatcaacgagctacgcaaggcactgcatgccgagcggagcaaggagaaagacagc
aaagttcagcaaggcctcctacaatag
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