Xiphophorus couchianus (Monterrey platyfish): 114135016
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Entry
114135016 CDS
T05908
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114135016 (ap5b1)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
114135016 (ap5b1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
114135016
NCBI-ProteinID:
XP_027857723
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All DBs
Position
20:29171438..29175901
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AA seq
941 aa
AA seq
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MATNWTERIRAFCCSPSGFLTETSPDTFLSELLRELRDDRVSYGVKVLLLSPLCEYPTLL
CSSESAGEETALDLMSVFTQCPSRFSQFRCHLLVALTGVLVCSSCVNGHSRAALDFLDLL
LRMARDASDPPGEGTRRLLGATACDCLREMEASCPGLLSQRLELLAGLRQLETSRLHQAF
GVLQILALRNAVYQLTKQAGAGAAHLKALLGGNGCVAWEADQEAVHMDATDAAMLLSLIL
GPMGRVPTLHTGPDCKELRSVLSSLLEESYLLTPLCQAALFHRLTEVVAMVPGIPPAIFR
AQLLRLLGTNEVCLLHVTLLMKCGFTDSLFSAEDEAFLLKRLVVLSQHPLLSSPEKLFYM
DCILHFPENRPISCGDSDEAPPVLLTPQLASVLLPSVFNDSATLLSRLNLQALVFLEEGD
EESRGLAYIYDHLAALLHIVDRGGSRDIVVTFFRAAFLFLFYFHHVERYATCLSEQLCHL
YLQHTRLAPHILNLVNQTQERLPECKWFVGLLQGLQRVITRIPFGQLPLHDLSSHLKVLD
RVGEEEEICQRSSLSFLSTIVTQTSSSLCTSGDWQLGNGLLGVCRRVLLHPNLDSMLIPL
ADILQHLAFHYGDTDIRDHARLYYTFLTMLSREKLSAVLVQSAAEGGSQVKKRTLSCVMA
ESEGLTNTLTVHQTEKPIFQLTEALPGPHQEAENLQLNQEDEYKTLECYRAQFSKSGFAS
LIVLKYHLTHTEPHDPRFEQLFSIQLHFSLTDDHYEELQDISVPCLFRQGPPPVVQLTLK
PKRPYPTTIHASAIFTSKDGLTWHTAMPDIHVAFQQVFLPLPAPPTWSRASTRDVFECLW
DEMRRETGESCISLFCCQLGEAALKALVEKHFHSFLVPDPLEEAAEFRALLFLPPKSHML
LKIGSTEDAAHFNMATDDCRLLPQMNSYLLKVTSSLENSVS
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaactggacggagagaattagagctttctgctgcagtccaagtggcttcctg
acagaaacgagcccggatactttcctgtcagagctgctacgggagctgcgggatgacaga
gtcagctacggagtgaaggtcctcctgttgtctcccctctgtgaatatccaaccctgctg
tgctcctcagaatctgccggcgaggagacagccctggatctcatgtcggtgttcacccag
tgtccgtccaggttcagccagtttcgctgccatctcctcgtggccctcaccggcgtcctc
gtctgctcctcctgtgtgaacggccactcccgggctgcgctggactttctcgacttgctc
cttcggatggctcgggacgccagcgacccccccggcgagggcacacggcgccttctcgga
gcaacggcctgcgactgcctgcgtgagatggaggccagttgtcccggacttctctcccag
cgcctcgagctcttggccgggctgcggcagctggagacctccaggcttcatcaggctttt
ggggtgctgcagattctggcgctgagaaatgctgtttatcagctcactaaacaagcagga
gcaggcgctgcgcatcttaaagctctgctaggaggaaatggctgcgttgcgtgggaggca
gaccaggaagccgtccacatggacgccacggatgcggccatgctgttgtccctcatccta
ggaccaatgggcagagtgccgacccttcacactggacctgactgtaaggagctgcggtct
gttctctcttccctattagaagagtcctacctcctcacgcctttgtgtcaggctgcactt
ttccacagactaaccgaggtggttgccatggtgcccgggatccctccagccatatttcga
gctcagctcctgcgactgctgggaaccaacgaggtttgcctcctccatgtcaccctgctg
atgaagtgcggcttcaccgacagcctcttcagcgccgaagacgaagccttcctcctgaag
cggctggtagtcctctcccagcacccgctcctgagctcgcccgagaagctcttctacatg
gactgcatcctgcactttccagagaaccgtccaatcagctgcggtgacagcgacgaggcc
cctcctgtgctgctgaccccacagctggcctcggtcctgctgccttcggtgtttaatgac
agcgccaccctgctgagccgactcaacctgcaggctctggtcttcctggaagaaggggac
gaggagagccggggcctggcctacatctacgaccaccttgcggcgctgctgcacatcgtg
gacaggggaggcagcagagatattgttgtgacctttttcagagctgccttcctcttcctg
ttttacttccaccatgtggagcggtacgcaacttgccttagcgagcagctatgccatctc
tacctccaacacacccggctggccccacacatcctcaacctagtcaatcagactcaagag
aggttaccagagtgcaagtggtttgtggggctcctgcagggtctccagagagtgataacc
aggatcccgtttggccagctccccctacatgacctcagcagccaccttaaggtgctggat
cgggtgggagaggaagaagaaatctgtcagcgtagctcccttagctttctgtccactatt
gtcacccaaacttcctcctcgctgtgtaccagtggcgactggcagttgggaaatggtctg
ctgggagtttgccgccgtgtgctcctccatcccaatctggactctatgcttattcctttg
gccgacattctgcagcatcttgccttccactatggcgacacggacatcagggaccacgcc
cgcctctactacacgttcctcacgatgttatctcgggagaagctgtccgcagtgctggtg
cagagtgccgcagagggcggcagtcaagtcaagaagcgaacgctgtcctgcgttatggcg
gagagcgaggggctgactaacaccctgaccgtccaccagaccgagaaacccatatttcag
ctgaccgaggctttacctgggccacatcaagaggcagaaaaccttcagctgaatcaggag
gatgagtacaaaacactggaatgttacagggctcagttcagcaagtctggctttgcttca
cttatcgtgttaaagtaccacctgacccacacggagccccatgaccctcgcttcgagcag
cttttcagcatccagctccacttcagcctcacagacgatcactacgaagagctgcaggac
atcagcgtcccctgtctcttcagacagggaccaccgcccgtggtgcagctgacactgaag
cccaaacggccgtacccaaccaccatccacgcgagcgccatcttcacctctaaggacggg
ctcacctggcacaccgctatgccggacatccacgtggcattccagcaggtcttcctgccg
ctgcccgcacccccaacctggagcagagccagcacacgagacgtctttgagtgcctgtgg
gatgaaatgcgccgtgagacgggagagtcttgtatcagtctgttctgctgccagctgggg
gaggccgctctgaaagctctggtggagaaacacttccattccttccttgtgccagacccg
ttggaggaggcagccgagttcagggcgctcctgtttctcccaccaaagtctcacatgctg
cttaagatcggctctacggaggacgccgcgcacttcaacatggccaccgatgactgtcgg
ctgcttcctcagatgaactcatacctgctgaaagtcacttcttcactagagaattctgtc
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