Xiphophorus couchianus (Monterrey platyfish): 114135054
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Entry
114135054 CDS
T05908
Symbol
nisch
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114135054 (nisch)
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
114135054 (nisch)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
PX
LRR_8
LRR_9
LRR_NXF1-5
LRR_6
PH_PLEKHM2
LRR_LRWD1
HasA
Motif
Other DBs
NCBI-GeneID:
114135054
NCBI-ProteinID:
XP_027857763
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All DBs
Position
20:complement(1115926..1134096)
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AA seq
1426 aa
AA seq
DB search
MEHGPFPEVVPARKVTVVGSELVESYTVYIIDVTDGLHRWTVKHRYSDFYELHEKLTAEK
KVDRHLLPPKKILGKNSKSLVERRQKELELYLQTLLQQFPEATPTPLAYFLHFHLYEING
ITAALAEELFHKGEQLLQAGEVFSLRPLQLYSVSQQLRLATPTCLSGDARTDLGHILDFT
CRLRYLKISGSRGPVGTSNIQETSLPFDLSVFKSLLQIEISDCSSQQIQGLPSLRASLAT
LNLHRSTESMMSVLVAEASEFPQWEPEGAEPGCPVTALVPIWRHLTTLDMSHNRIGAVDD
SVKLIPKVEFLDLSYNQLSSVENLQHLYSLVHVDLSYNRLRSLEAAHTRLGNIKTLSLAG
NQLETLSGLSKLYSLVNLDLSHNQLAQLEEIRNIGALPCLEKLNLSSNPMCIIPDYRTKV
LAQFGDRAAEVSLDCRATTEKELDTVEVLKAIQKAKEVKDRMSSSDKKISEDSRASAAPP
ASSSSSSSSCPSQGLTSREDDPNPPDTPPPLDAKPPPNIADTHLLSAEPAQVKRSAVSQP
EQPLPTANTASSSVAVCCFCSACFSSPLEVCCSACSATCCPLLPSALFALSNKDFSTQLS
QRLGSILREQKTKRGEEEEQEEQRSDSKDVRSEVQSTDVGGRSLSSRDGYFEMGLDDSGE
ELVGSAPFPEGEEPGVRLEEPSEEQLEVRVRRVLWCCCVLVGQEVKQRGACLVLTDRLLA
LLLWSHDSLSANQERDLSSGPDQSPDVEEVLSGLQADLLVPYSQVLLNCPAELPDCCLSF
GIKTGQNRWFIFSEAEEVRQARTELNGLLQDPSDLPAPPLPRLLPPSLLSPWEVEESLSA
RGGFPAHILCSSSSSPSSSSPASGSAQLSSDLGPEDAGLLSLLFLTPRTLWVLRMDFRHP
WTDRPPVHLSSSLSSWCRLVRLALSSVLLHPDHREMGDGPDRVSCPDPQHCLRRSHSVDL
LAGGRRLLLLFPLAQDRSSFLGELSQRRASLEGLKVVALPRPCRPCPGPAGSGCCRTKEP
CCCCSDRKSGCSSRDSLTLQDEENQPPPHLVPGLSPGLKLLAGLRGQQLLSYFSRYVAQS
QAEELRHVCWLSVLLYKTPGSEVTSCLLLSTEAIYFLLDDSVPPLHPHSGTDAETSLCSC
LSVRLAELQAVNVGLFDQNFRVVGRSADQVVCCLSRDGYGTGVFLQRLMAALSLQQQQRP
PQPDPSDQDFYSQFTGKMQNYELVHSSRVRFIYPSDEEMGDLTFIVSERKTSASAPPPSS
CSILLYLLVFQVQMSSQPSTERSPVLQPRTLVLTGTDVFLLDEDYVSYPLPDFAKEPPSR
GRYQLCEARRIRDLDRVLLGYQPYPQALTLVFDDLPGPDLLCHLTMDHFAPTGEEAPPPG
GVAGGQGEVQWCVFVPGGDSRERLISLLARQWEALCSRELPVELTG
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggagcacggcccttttccagaggtggttccggcccggaaggtgactgtggtcggttcg
gagctggtggagagctacacggtctacatcatcgatgtaacggacggtctgcaccggtgg
acggtgaagcaccgctacagcgatttctacgagctgcatgagaagctgacagcagaaaag
aaggtggaccgccatctgcttcctcccaagaagatcctggggaagaactccaagagtctc
gtggagcggcggcagaaggagctggagctctacctgcagacgctgctgcagcagtttcca
gaggccacgcccactccgctcgcctacttcctgcacttccacctctatgagattaatggc
atcacagcagcgctggcggaggagctcttccataaaggggagcagctgctgcaggcagga
gaggtgttttccctgcgtccgctccagctttactccgtctcccagcagctccgcctggcc
acgcccacctgcctcagcggagacgccagaacggacctgggacacatcctggacttcacc
tgcaggctgcgctacctcaagatttcagggagcagaggtccagtaggaaccagtaacatc
caggagaccagtctccccttcgacctgtcagtgttcaagtccctgctgcagattgagatc
agcgactgcagctcgcagcagatccagggcctgccgtccctgagggccagcttggctaca
ctgaacctccaccgctctactgagtccatgatgtccgtcctcgtcgcagaggccagcgag
ttcccgcagtgggaacctgagggggcggagcctggctgtcctgtcacagcgctggttcct
atctggagacacctgaccacgctggacatgagccacaaccgcatcggcgccgtcgacgac
tcagtgaaactcatcccaaaggtggagttcctggatctgagctacaaccagctgtcgtct
gtggagaacctgcagcacctctacagcttggtgcatgtggacctgagctacaaccgcctg
cgcagcctggaggcggctcacacgcggctggggaacatcaagacgctgagcctggcgggg
aaccagctggagacgctcagtggcctctccaagctctactctctggtcaacctggacctg
agccacaatcaactggcacagctggaggagatcaggaacatcggagctctgccctgcttg
gagaagctcaacctgtccagtaaccccatgtgcatcatcccagactacagaaccaaggtt
ctggcccagtttggggaccgggcagcagaggtgagcctggactgcagagcgacgacggag
aaggagctggacacggtggaagtgctgaaagccattcagaaagccaaagaggtcaaagat
cgcatgagcagcagcgataagaagatcagtgaggactccagggcgtctgcagctcctcct
gcctcctcctcttcctcctcttcgtcctgccccagccaaggactgaccagcagagaggac
gaccccaacccccctgacacccctccccctctggacgccaaaccccctcccaacatcgcc
gacacacacctcctgtctgccgaacctgctcaggtaaaacgttctgctgtcagccagcct
gaacagccactcccaacagcgaacacggcttcttcctctgtagccgtctgctgtttctgc
tcagcttgcttttccagtcccctggaggtctgctgctccgcctgcagcgccacctgctgt
ccgctgctcccctctgctctattcgccctgtccaacaaagacttcagtacccagctctcc
cagcggctcggctccatcctgagggagcagaagacgaagagaggagaggaagaggagcag
gaagagcagaggtctgattccaaagacgttcggtctgaagtgcagagcaccgacgtcggc
ggtcgcagtctaagctccagggacggctactttgagatgggcctggatgactctggggag
gagctggttggctccgcccccttcccggagggggaggagcctggcgtccggctggaggag
ccgagcgaggaacagctggaggttcgggtccgcagagttctgtggtgctgctgtgtcctg
gtcggccaggaggtgaagcagaggggggcatgtctggttctgacggaccggctgctggcg
ctgctcctctggtcacatgactccctgtcagccaatcaggagagagatctttcctcaggc
ccggaccagagtccagatgtggaggaagttctgtcgggtctccaggcggatctgctggta
ccgtactcccaggttctgctgaactgcccagccgagctgccggactgctgcctctcgttt
ggaatcaaaacgggtcagaaccgctggttcatcttctctgaggccgaggaggtccgacag
gccagaaccgagctgaacgggctgcttcaggacccctcggacctcccagctcctcctctt
cctcggctccttcctccttcgctcctcagcccctgggaggtggaggagagtctttcagct
cggggaggattccccgcccacatcctctgctcctcttcctcttctccctcctcttcctcg
ccggcctcaggctccgcccagctctcctctgatctcggcccggaggacgccggcctcctg
tcgctcctcttcctcacgcccagaaccctctgggttctccggatggacttcaggcatccg
tggacggaccgtccccctgtccacctgtcgtcctctttgtcatcctggtgcaggctggtc
cgtttggctctcagctcggttctccttcaccccgaccacagagagatgggagacggaccc
gaccgcgtttcctgtccagacccgcagcactgcctcaggaggagccactctgtggatctg
ctggctggaggtcggaggctgctgctgctcttccctctggcccaggacaggagctccttc
ctgggggagctgagccagaggagagcctctctggaggggctgaaggtggtggcgctgccc
cggccctgcaggccctgcccgggcccagccggatccggctgctgcagaaccaaggagccc
tgctgctgctgcagcgacaggaagtcaggctgcagcagtcgagactcattgacactccaa
gatgaggagaaccagccgccgccccacctggtcccgggcctctcacctggactgaagctc
ctagccggactcagaggccagcagctgctctcctacttcagcagatacgtagctcagtcg
caggccgaggagctgaggcatgtctgctggctctctgtgctgctctacaagactccagga
agtgaggtcacttcctgcctgctgctgtccaccgaggccatctacttcctgctggacgac
tccgtcccgccgctgcatccccactcagggacggacgccgagacgagtctctgcagctgc
ctgagcgtccggctagctgagctgcaggccgtcaacgtgggactgtttgaccagaacttc
agggtggtaggacgctctgcggaccaggtggtctgctgtctcagcagggacggctacggg
accggcgtcttcctgcagcggctgatggcggctctcagcctgcagcagcagcagcgtccg
ccccaacccgacccgtccgaccaggacttctactcccagttcactggaaagatgcagaac
tacgagctggtccacagcagcagggtgcgcttcatttaccccagtgacgaggagatgggc
gacctgaccttcatcgtgtcagagaggaaaacttctgccagcgcgccgcctccgtcctcc
tgcagcatcctgctctacctgctcgtcttccaggtccagatgtccagccagccgtccact
gagcggtctccggtcctccagccccggacgttggtcctcaccgggacggacgtcttcctg
ctggacgaggactacgtcagctaccctctgccggacttcgccaaggagccgccgtccaga
gggcgctaccagctgtgtgaggcccgacggatccgggacctggaccgggttctgctgggc
taccagccctacccccaggccttgaccctggtgtttgacgacctgccgggtccggacctg
ctctgccacctgaccatggaccacttcgcccccaccggcgaggaggctccgcccccgggg
ggcgtggccggcggccagggcgaggtgcagtggtgcgtctttgtgccggggggcgacagc
agggagcggctgatctcgctgctcgcccgccagtgggaggcgctgtgcagccgggagctt
cctgtcgagctcaccggctga
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