Xiphophorus couchianus (Monterrey platyfish): 114135097
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Entry
114135097 CDS
T05908
Symbol
hcfc1
Name
(RefSeq) host cell factor 1
KO
K14966
host cell factor 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03083
Polycomb repressive complex
xco04980
Cobalamin transport and metabolism
xco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
114135097 (hcfc1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
114135097 (hcfc1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114135097 (hcfc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xco01009
]
114135097 (hcfc1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114135097 (hcfc1)
03029 Mitochondrial biogenesis [BR:
xco03029
]
114135097 (hcfc1)
Protein phosphatases and associated proteins [BR:
xco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114135097 (hcfc1)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
114135097 (hcfc1)
HMT complexes
COMPASS/SET1 complex
114135097 (hcfc1)
MLL-HCF complex
114135097 (hcfc1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
114135097 (hcfc1)
Mitochondrial biogenesis [BR:
xco03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
114135097 (hcfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
fn3
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
114135097
NCBI-ProteinID:
XP_027857846
LinkDB
All DBs
Position
20:23920942..23938626
Genome browser
AA seq
1709 aa
AA seq
DB search
MSAPGSAVSGTTPSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
PGSSVVGWDIPITYGVLPPPRESHTAVVYTEKMTRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPSVGGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAVASPATSATPSQ
PVNSPKSPALAAAAPSAQSLQQTAVLKVAAQQAATGASVVTVRPSQPGKSPVTVTSLPPG
VRMVVPTQTTQGSPIGSSPQMSGMAALAAAAAATQKIPPSSGGTVLNVPAGATILKTVAV
SPGTTTVKVASPVMVSNPATRMLKTAAAQVGTATASSPTTTRPIITVHKSGAVTVAQQAQ
VVTTVVGGVTKTITLVKSPLTMGSSGTLISNLGKMMSVVQTKPVQTSAVTGQASTNPLTQ
IIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGVTGNKPTILNISGVSPTTTKQGTTII
KTIPMSAIMTQPGATGVTSSAGMKTPITILTTKVMTTGTPGKIITAVPKLSTAAGQQGLT
QVVLKGAPGQPGTILRTLPMSTVGGVRLVTPVTVSSVKPTVTTLVVKGTTGVTTLGTVTG
TVSTSLAGATADSSSASLVTPITTLANIATLSSQVINTGAITVSAAQTSLTSTSTLPSST
MTVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSTEAGATGDGSGTVTLVCS
NPPCETHDTGTTNTATTSSATIGAGQVCSNPPCETHETGTTNTATTSSATIGAGQVCSNP
PCETHETGTTNTATTASSNMSTLRMCSNPPCETHETGTTNTATTATSNMGGTQQVCSNPP
CETHVTGTTNTATQASSSMNAGETGTVQSSQSNPPSETHESGTSDSPSASTSSVGEDQSS
TATGQIQRVCSNPPYETHETGTTNTATTATCNMETGEGTAAQQTEEGAEGTSTTEEAATT
AATSVATTTQGRAITTVTQSTPAPGPSVPSISSITEGVSTAASSTEEPMQTEEPASAEAA
PAEEPAAAMETQAEGEAATATALNLPSELMSEAQGTTLMVTGLSDEELAVTAAAEAAAQA
AATEEAQALAIQAVLQAAQQAVLNEGDGSGESQQPTNIPIMLTQQELAALVQQQLQEAQA
AAQQASVDTSMPTEGLAPADSLNDPSVESNGHNEMAASVTSAVASLLPRTTAETLAPSST
FAASISVASPAKLQAAATLAEVANGIEGEKQAPQPAPVKPVVKKENQWFDVGIVKVTNMV
VTHFHVPGDDSQGDDDSGAVPDYGQMKKMELQPGTAYKFRVAGINACGRGTFSEISAFKT
CLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQTAEAKASTPAQL
AFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESGKD
ATSAKPAPKRPGTSPDAKTTGPKKARTDQ
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctggttccgcggtgtctgggaccactccgtcggttctgcagccacgatgg
aagcgggtcctcggatggtccggtccggtccctcggcccaggcacggacacagagctgtg
gctataaaggaactgatggttgtttttggaggtggaaacgaaggaattgttgacgaatta
catgtatacaacacagcgacaaaccagtggtttatcccagcagtccgtggtgatatccct
ccaggttgtgctgcatatggttttgtatgtgatggaacacggttgctggtttttggtggg
atggtggaatatgggaaatacagcaatgatctctatgaactacaggccagcagatgggaa
tggaaaaaactgaaagccaaaaatccaaaaaacggcccaccgccttgtcctcgactcggc
cacagcttttcactcgttggcaacaaatgctacttgtttggtggactggcaaatgatagt
gaagaccccaaaaacaacattccccgatacctaaatgatttgtacacactcgagcttcgt
cctggttctagcgtggtcgggtgggatattccaatcacgtatggcgtcctgcctccgcct
cgtgaaagtcacaccgctgtggtgtacacagaaaagatgaccagaaagtcacgcttgata
atctatggaggaatgagcggttgtcgccttggagatctgtggacgcttgacatagatacc
ctgacttggaacaaaccttcagtaggcggtacggcacctcttccacgaagtcttcactct
gccaccacaatcacaaacaagatgtacgtttttggcggatgggttcctttggtaatggat
gacgttaaagtggccacgcatgagaaagaatggaaatgcacaaacacactcgcttgccta
aatctcgactccatgtgttgggaaacagtgttgatggataccctggaggataacatcccc
agggcccgtgctggccactgtgccgtggccatcaattccagactgtatgtctggagcggt
cgtgacggttatcggaaagcgtggaacaaccaagtgtgctgtaaagacctttggtacctg
gaaacagagcggccccacgctcccgccagggtccagttagtccgtgccaacacaaactct
ctggaggtgagctggggtgcagtgtccaccgccgacacgtacctgctgcagctgcagaag
tacgacatccccgcgaccccggcggtagcctcgccagccacgagtgcaacgccttcgcaa
cctgtcaactctccaaagagccctgcactggctgctgcagcaccctccgcgcagagttta
caacagacagctgttttaaaggttgcagctcagcaggctgccacaggcgcatctgttgtc
acagttcgcccgagccagccagggaaatcccccgtcaccgtgacgtcccttcctccaggt
gttcgaatggtagtgcctacccaaaccacccaaggatcgccaattggaagcagccctcag
atgagtggcatggcagctttagctgctgcagctgcagccacacagaagatcccaccctct
tcaggaggcaccgttctcaatgttcccgcgggtgccaccatcctcaaaacagtggctgtc
tccccaggcaccaccacagtgaaagtggcttctcctgtaatggtcagtaacccagccacc
cgcatgctgaagacggccgcggcccaggtgggcacggcaaccgcgtcctctcccaccacc
accagaccgatcatcactgtgcacaagtccggggctgtcacagtggctcagcaggcccag
gtggtcaccactgtggtgggaggagtcaccaagaccatcaccctggtcaagagtcctctc
accatgggcagcagcggtactttgatctccaaccttggcaagatgatgtctgtggtgcaa
accaagccagtgcagacgtcagctgtcacaggccaggcttccactaaccctctcacacag
atcatacagacaaagggtcccctcccagccggcaccatcctgaaactggtgacgtctgca
gacggcaagcccacaacaatcatcacaacgtcccaggccggagtcacaggaaacaagccc
acgatcctcaacataagtggcgtctcacctactactaccaagcagggaaccaccatcatt
aaaaccatccccatgtcggccatcatgacccagcctggagccacaggcgtgacgagcagt
gcaggcatgaaaacaccaataacgatccttaccaccaaggtaatgaccactggaacgcct
ggtaaaattattactgctgtgcccaaactgtccactgcagctggacagcagggactgacg
caggtggtattaaagggcgctccaggacagccgggcactattttgcgtaccttgcccatg
agcacagtaggcggtgttcgtctcgttacgccagtgacggtctcctctgttaagcccacg
gttactacgctggttgtcaagggaactactggagtcaccactcttggcaccgtcactggg
acggtgtccacaagcttggcaggagccacggctgacagctccagtgcctccctggtgacg
ccgatcaccacgctggcgaacatcgctacactgtccagccaggtgatcaacacaggcgcc
atcacggtctcggctgctcagaccagtctgacttctacttcgactctgccctcctctacg
atgacagtgcagaaccagcccacccaggttaccctgatcacaacccccagtggtgttgaa
gcccagccagtccaggatcttcctgtgtccattctggcttctccgacctctgaacagccc
agctccactgaggcaggagcaactggagacggttctggtaccgtcaccctggtctgctcc
aacccgccgtgcgagacccacgatacaggaactaccaacactgccaccacttcctccgct
acaatcggagccggacaggtctgctccaacccgccctgcgagacccacgagacaggaacc
accaacacggcaacgacttcctctgctacaatcggagccggacaggtctgctccaacccg
ccctgcgagacccacgagactggaaccaccaacacggccacgacggcgtcttcgaacatg
tccacattacgcatgtgctccaaccctccctgcgagacccacgaaacggggacgacaaac
acggccacaacagcgacctccaacatgggagggacccaacaggtgtgttcaaatcccccc
tgcgagacccacgtgacgggcaccaccaacacagcaacacaagcttcctccagcatgaac
gccggcgagacgggcaccgtgcagagctctcagtcaaatccacccagcgaaactcacgaa
tcagggaccagcgacagtccgtccgcatccacctccagcgtaggggaggaccagagcagc
acagcaacgggccagatccagagggtctgctccaacccgccgtatgaaacgcatgagact
gggaccaccaacaccgccactactgctacctgcaacatggagaccggtgaaggcacagcc
gcccagcagacagaggaaggagcagaaggaacaagcaccacagaggaagctgctaccact
gcagctactagcgtagctacaaccacccaaggcagagccatcaccacggtcactcagtcc
acaccggcccctgggccctcagtaccgtcaatttcctcaatcacagaaggagtaagcact
gcagccagcagcacggaggagccgatgcagactgaagaacctgcatcagcagaagctgca
cctgctgaggagcctgctgccgccatggagacacaagcagaaggagaagcagctactgca
acggccttgaacctgccctcggagctgatgtctgaggcccaggggaccacgctgatggtg
acggggctgtcggacgaagagctggctgtcaccgccgccgccgaggctgctgcccaggct
gcagctacagaggaggcccaggccctcgccatccaggctgtcctgcaggcagcgcagcaa
gctgtattgaatgaaggcgacggttctggggaaagccagcagcccaccaacatccccatc
atgctgacccagcaggagctagccgcactggtgcagcagcaactacaggaagcacaggcc
gccgcgcagcaggcctccgtggacaccagcatgcctaccgagggcctcgcccccgccgac
agcctcaacgacccgtcagtcgaaagcaatgggcacaacgaaatggctgcctcggtcacc
agcgccgtggcatcccttctaccacgtaccactgctgagactctggctccatcaagtacg
tttgcggcgtctatatcagtagcaagtccggccaagctgcaggcggcagccactctcgca
gaggtggccaatggcatcgagggagagaaacaagcccctcagcccgctccagtgaagcct
gttgttaaaaaggagaaccagtggtttgatgtcgggatcgtaaaagtgacgaatatggtc
gtcactcacttccatgtgccaggggacgattctcaaggagatgacgactctggcgccgta
ccggactacggtcagatgaagaagatggagctgcagcccggcacggcgtacaagttccgc
gtggctgggatcaacgcctgcgggcgtggaacgttctctgagatttctgctttcaagacc
tgcctacccggattcccaggagccccgtgtgccatcaaaattagcaagagcccagatggc
gcccacctgacctgggagccgccttcggtcacgtcagggaaaatcatagagtactctgtg
tacctggccatccagagcagccagacggctgaggccaaggcctccaccccggcccagcta
gccttcatgcgagtgtactgcggacccaacccctcgtgcttggtgcagtcgtccagcctc
tcaaacgctcacatcgactacacgactaaaccagccatcatcttccgcatcgccgcccgc
aacgagaagggctacggtcccgccactcaagttcgatggctacaggaatctggtaaagac
gccacttctgcaaaacctgccccgaaaagacccggcacctctcctgatgccaagactact
ggtccaaagaaagcaaggacggaccagtga
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