Xiphophorus couchianus (Monterrey platyfish): 114135098
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Entry
114135098 CDS
T05908
Name
(RefSeq) GATA-binding factor 1-B-like
KO
K17894
GATA-binding protein 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114135098
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
114135098
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GFIT
Motif
Pfam:
GATA
DUF7573
Zn_Ribbon_TF
DUF2387
ArfGap
DZR_2
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
114135098
NCBI-ProteinID:
XP_027857847
UniProt:
A0A3B5MQS0
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Position
20:23942767..23955771
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AA seq
426 aa
AA seq
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MEDSSDQSHWASPTLLSSDPLAGFPSDPGLLTAGEEGEAFFSAADADYAGLSSFFPNPSH
SRAPSSYRHSSVRQVYTSPGLLSNLQLLDGPPSHPLSSPYSPAASTWSSSPLTKTPLHSH
TPTSLYSPGMASSFTASRDGYPSPGREGRESPRLQEALKAERLSPLGGSGASSNFLNLTP
AAGSMYTPSSHSHPHMLSPYSSYMSGPQDYGSPAFYSSAGAWISPSYSPKLRNKLRPTTP
EARECVNCGATATPLWRRDGTGHYLCNACGLYHKMNGQNRPLIRPKKRLIVSKRAGTVCA
NCHTSTTTLWRRNASGEPVCNACGLYFKLHNVNRPLTMKKEGIQTRNRKVSNKNKKSKKA
AMLEPYLDAVQPPPLDDNGGPFSLGPGTLLTYSHTPHLLPTPTPLHPSTGLPYAHHLNSG
MVPTLV
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggaggattcgtcagaccagtcccattgggcgtctcccaccttgctcagctctgacccc
ctcgccggcttcccctctgacccgggcctgttgaccgccggggaagaaggagaggcattt
ttctcagccgcagacgccgattacgccgggctgtcctcgttcttccccaacccgagccac
agccgagcgccgtccagctacagacacagctccgtccggcaggtgtacacctccccaggc
ctcctcagtaacctccagctcctggacgggcccccgagccacccgctgagctcgccctac
agccccgcggcctccacctggagcagcagcccgctcaccaagacgccgctgcactcgcac
accccgacctccctctactcccccgggatggcctcctccttcaccgcctccagggacgga
tacccttcccccggaagggagggccgggagagcccccgtctccaggaggccctcaaagcg
gagcgtctgagccccctgggcggctcgggtgccagcagcaacttcctgaacctgaccccc
gctgccgggagcatgtacaccccctcgtcgcactcgcacccccacatgctgagcccgtac
agctcgtacatgagcgggccgcaggactacggctcgccggccttctactccagcgccggc
gcctggatcagcccgtcctactccccgaagctccgcaacaagctgaggccgaccactcca
gaggcccgagaatgtgtgaactgcggagccaccgcgacgcccctgtggcgccgggacggt
accggacactacctgtgcaacgcctgcggactgtaccacaagatgaacggccagaaccga
cctctgatccggcccaagaagagactgatcgtgagcaagcgcgcgggtaccgtgtgcgcc
aactgtcacaccagcacgacgacgctgtggcggcgcaacgccagcggggagcccgtgtgc
aacgcctgcggactctacttcaaactgcacaatgtcaaccgaccgctcaccatgaagaag
gaaggcatccagacccgcaaccggaaagtctccaacaagaacaagaagagcaagaaggcc
gccatgttggagccgtacttggacgcggtccagccgcctcccctggacgacaacggcggg
cccttttccctcggccccgggactctgctgacctacagccacacgccgcacctcctgccc
accccgaccccgctgcacccttccaccggcctgccctacgcgcaccacctcaactctggc
atggtgcccactctggtgtga
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