Xiphophorus couchianus (Monterrey platyfish): 114135146
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Entry
114135146 CDS
T05908
Symbol
nphp4
Name
(RefSeq) nephrocystin-4
KO
K16478
nephrocystin-4
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xco03037
]
114135146 (nphp4)
Cilium and associated proteins [BR:
xco03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
114135146 (nphp4)
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Gene cluster
GFIT
Motif
Pfam:
DUF2155
Motif
Other DBs
NCBI-GeneID:
114135146
NCBI-ProteinID:
XP_027857974
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All DBs
Position
1:7468320..7636639
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AA seq
1441 aa
AA seq
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MADSWEELFHKNRLVPPSSQTVRLAVENHLTANHGFQLSFSRLTVAQLPQALSAGEDVTY
QLRVTLYDGKLQHFFGKTWKSSSQKMKNNKISFNEVLYLHTSVLLPSTLVVVELVSLSTK
PDGSYLSLGRGFSILELFTNRPEGPGTNGDRRLNLHHGSPRGLLHPSLKDSVDYGNLLKV
IDGAHLDCVMKTHPSLNSAVHLLPEHALVSGEDNIPGLIPSPTGDALLRPQLLKMTPFTL
DKLTISLQPSLEKFESLLLQLINADCQNTKQPEPEDAQRTVVIQERRLHVGVHNGWCFLD
KPQVVVLEPFASGVRGRTDSISKKSTLVKDSSATSSRPQMLGLRSSLEIKMANNQALAII
FQLEYVFSAPIGRETMLSTTSTSRAAFLQCLRWGIWCPFQELAHWKDKEVQLVLQGGAKP
NPLRVMVYSTEASVQTHSPAAVSAPNTVQERSEAKDVIRFWLFSSLEKKPSSPRVSLRTK
QEDVPRQRSSPSPSRKQVTPTSPPESPRGPGLSLSQLAATSRYPTISHSSSSLPWQQSFP
SLLHPSPLASAHQLSHVACSAVSSITHLEMDLQREGGKMTSKDEEGDHLQELPFTPIHAP
VITLGVNVPSSCSVSSRSSLAHLFSAGFPEILDCSGQVAEVLDPTEPMPFDPQREEADLL
QGNLLVFEFLAFTRIPGAGVESDWPRNIYVTFQFYRFPPVTSQQLKLLTSDKVRPKANEA
LPCVLATINKDGFVNTGSPGLQIQFRVDDDFLRPREKRWFLRHLALHTMHIDVWDSESLL
LIGSTAIELKCLLRQGKPAVQALHELEILTTDYVEEDTLLPDADQHLRSTSTAMTVYTIV
RGRLHIRTGSIGCPADPSRKRAANGISSYSHIITPREVTTGFKGGSLSTRNILQLNARNT
AQEHRLDGDAALLNRNRIRAREITPEVQNLNTDSRRRKLDCMAAVHRLEAKENTKAADVT
GLNPATRLIREHQPSDEYSKAEGIANMLSQAITTQHLLYANLGSAEYMEFVLKNPFNVPQ
TVTIHSDDSELSVITDTEEWRYFKAITKTSTPLEENMFHVEEAAPGPRVYLRPKESVHIP
LKYQSFLCNHITSVQGPSFLPTGKGSQMAKKTLSNIINAKIIKVTFRAEDGKPMAICQVN
VEPTPHVVDQTFRLYHPELCFLKKAIRLPPWEGSTAEDPNSCPHISVHCSDPNIICQTRM
LVPGEPQDVYLKVPGSPSPHIKMFFVMVFTDKWKAAPSQIWQVYVHFLERVDVSCVTGQR
TCQSLVLRGKQAVRKIKCFLSHPKEIEVDPAGVFVLPPAAVQELQLRVQPWQAGSRFLYV
NAVDVDQQRLVAAWLLCLSVHRPVLSKAFEVSVPAGNGRGSSRKITYTNPYTSTRTFLLR
SDHPDLLQFREDQFQIGGGESYTIGLRFAPSQSSGSAEILVYVNNSEEKTEETFCVKVNY
S
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagctgggaagaattgtttcacaagaaccggttggttcccccgtccagccaa
acagttcgcctggctgtggagaaccacctcaccgctaaccacggctttcagctcagcttc
agccggcttactgtagcgcaactcccgcaggctctgtcagctggggaagatgtgacctac
cagctgcgagtgactctgtatgatggaaaactccagcacttttttggaaaaacatggaag
agctcatcccaaaaaatgaaaaacaacaagatttccttcaacgaggttttgtacctgcat
acgtccgtgctgttgcccagcactctggtcgttgtggagctagtgtcgctatcaaccaaa
ccagacggctcctatctgtctctggggagaggcttcagcattctggagctttttaccaac
agaccagagggtccaggtactaatggagacagaaggctgaatctacaccatggatcacca
agaggcctcctccacccctcactgaaggactcagttgactatggcaacctactgaaggta
attgatggagcacatttggactgtgtgatgaaaacgcatccttcactgaattctgcagtg
catctgcttcctgagcatgctcttgtgtctggagaggacaacatacctgggctcattcct
tctccaacaggagacgctttgctgaggcctcagctgctcaagatgacgcccttcaccctg
gataaactgaccatttccctccagccttccctggagaagtttgagagccttctgttgcag
ctcatcaatgctgactgccaaaacacaaaacaacctgaaccagaggatgcacaaagaacg
gttgtcattcaagaacggaggcttcatgtcggtgtgcacaatggctggtgtttccttgat
aagccccaagtggtggtcctggagccctttgcatcaggagtcagaggacgaacagacagc
atctctaagaagagcacgctggtcaaggacagctctgcaacatcatcacgtcctcagatg
ctgggccttcgcagcagcttggagatcaaaatggccaataatcaggctttggcaatcatc
tttcagctagagtacgtcttctccgctcccataggccgagagactatgctgtctactacc
tccacatcccgagctgccttcttgcagtgccttcgttgggggatttggtgccccttccag
gagctagctcactggaaagacaaagaggtccagcttgttctgcaaggaggtgcaaagccg
aatcctctcagagtgatggtctacagcacagaggcgtctgtccagactcacagccctgct
gcagtctcagctccaaacacagtccaggaacgctcggaggcaaaggatgtgataagattt
tggctgttttccagtttggaaaagaagccatccagccccagggtatctctgaggactaag
caggaggatgtgccacgtcagagatcatcaccttcaccaagtcgaaaacaggtcactccc
acctctcctcctgaatccccgcgaggccccgggctctctctgtctcagctggcagctact
tcacgctacccgaccatcagccactccagctcgtcgttaccgtggcaacagtcatttcct
tctctgctccatccttccccattggcatcagcccaccagctgtcacatgtcgcctgctcg
gctgtcagcagcatcacccacctggagatggaccttcagcgggaaggcggcaaaatgacc
tccaaggacgaagaaggggatcatcttcaagagctgcccttcacccccatccatgctcct
gtcattactctgggagtgaatgtgccgagctcctgctcagtcagctccaggagctctctg
gcacaccttttctctgccggctttcctgaaatccttgactgcagcgggcaggtggcagaa
gtcctggacccaactgaacctatgcccttcgatcctcagcgggaggaggctgacctttta
cagggaaacctgctggtgtttgagtttctggcatttaccagaataccaggagcaggagtt
gaaagtgactggcctcgcaacatctatgttaccttccagttttatcgctttccccctgtc
acctcacagcaacttaagctgttgaccagcgataaggttcgacccaaagctaatgaggca
cttccttgtgtcttagccactatcaacaaagacggatttgttaatactggttctccaggc
ctgcagattcagttcagagttgatgacgatttcttgaggccaagagaaaagcgctggttc
ctccgccacctggccctccataccatgcacatcgatgtttgggacagtgagtcattgctc
ctcattggttctaccgccatagagctcaagtgcttgctgcgtcaggggaagcccgccgtc
caggctcttcacgagttggagatcctgaccacagattatgtggaagaggatactttactg
cctgacgcagatcagcatctgcgttcaacatccaccgcgatgacagtttacaccattgtc
agaggacggctccacatacgaacgggcagcataggatgtccagctgaccctagcaggaag
agagcagcgaacgggatatcatcttattctcacatcatcacgcctcgtgaagtcaccacc
ggctttaaaggaggaagcctgtcaacccgaaacatccttcaacttaatgcaaggaacacg
gcacaagaacacaggctggacggagatgcggcgctgttgaacagaaacagaatcagagct
cgggagatcacccctgaagtacaaaacctgaacaccgacagcaggcggcgaaagctggac
tgcatggctgcagtgcatcggctggaggctaaagagaacacaaaagcagccgatgttacg
ggtctaaatccagcaactcggttgatcagagaacatcaacccagcgacgagtacagcaag
gcagagggaattgcgaacatgctgagccaggccatcaccacacagcaccttctctatgcc
aacctgggctctgctgaatacatggagtttgtcctgaagaatccctttaacgtgcctcag
accgtcaccattcacagcgatgactctgagctcagtgtcatcactgacaccgaggagtgg
cgttacttcaaagcaataacgaaaacctctaccccgctggaggagaacatgtttcacgtg
gaagaagcagctcctggtcccagggtttatctccggcctaaagaaagtgtccacattccc
ctgaagtaccagagcttcctgtgcaaccacatcacatctgtccagggaccaagcttcctg
cctacaggcaaaggttcccagatggccaagaagacgctgtccaacattattaatgccaaa
attatcaaggttacattcagagcagaagacggcaagccaatggccatctgccaggtgaac
gtggagccaacgccccacgttgtggaccagactttccgactttaccaccctgaactttgt
ttcctgaaaaaggccatccgcctgccgccgtgggaaggctcaacagccgaagacccaaat
tcctgccctcatatttctgtgcactgcagtgaccctaatatcatctgccagacgaggatg
ctggttcctggagagcctcaggatgtgtacttaaaagtaccagggagtcccagtccacac
ataaagatgttctttgtcatggttttcactgataagtggaaggcggcgccctctcagatc
tggcaggtttacgtgcattttctggagcgggtggacgtcagctgcgtgactggccagaga
acctgtcaatcactggttctgaggggaaaacaggccgttcgcaagatcaaatgtttcttg
tcacaccccaaagaaattgaggtggacccggccggtgtgtttgttttgcctcctgccgct
gtgcaggagctccagctaagggttcagccatggcaggctggcagccgcttcctgtatgtg
aacgctgtggacgtggatcagcaaaggctggtcgctgcctggctcctgtgtctcagtgtc
caccgtcctgtactgtcaaaggcattcgaagtgtctgtcccagctggtaatgggcgtggc
agctccagaaaaattacatacaccaacccttacaccagcacacggacattcctgctccgc
tccgaccatcctgacctactccagttcagagaggatcagttccagattggcggtggagag
agttacacgatcggattgcgattcgctcccagccagagttcgggctcggcggagatcctg
gtttacgtcaataactcggaggagaaaaccgaggaaacattctgcgtcaaagtcaactat
tcttga
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