Xiphophorus couchianus (Monterrey platyfish): 114135233
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Entry
114135233 CDS
T05908
Symbol
slc6a1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
114135233 (slc6a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xco02000
]
114135233 (slc6a1)
Transporters [BR:
xco02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
114135233 (slc6a1)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
114135233
NCBI-ProteinID:
XP_027858136
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Position
20:11781555..11798638
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AA seq
605 aa
AA seq
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MATNGTKASDGHVLTETVNDAPSTTPNDKPKTLVVKVQKTKKDIPERETWVGKFDFLLSC
VGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLVFAGMPLFFLETALGQYTSIGGLGVWK
LAPMFKGVGLAAAVLSFWLNIYYIVIIAWAIYYLYNSFTTDLPWKTCGNAWNTDRCYTNY
SIADTTNLTSAVVEFWERNMHQLTDGLEKPGEVRIPLAITLAIAWVLVYFCIWKGVSWTG
KVVYFSATYPYFMLFILFCRGVTLPGAIDGILFYITPDFQKLKESEVWLDAATQIFFSYG
LGLGSLIALGSYNPFNNNVYRDSIIVCCINSFTSMFAGFVIFSIVGFMANVTKRPIADVA
ASGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPHILR
KRREIFIAVVCLVSYIIGLSNITQGGLYVFKLFDYYSASGMSLLFLVFFECISISWFYGV
NKFFDNIEEMVGYRPCLWWKACWVVFTPLIVAGVFLFSAVQMVPLTMGDYVFPSWGQGVG
WLMALSSMTLIPGYMGYMFLTLKGTYKERLRMMIKPLVLVKTQENGPDQQAESQNQNPAN
EEAYI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaacgggaccaaagcctcggacggacacgtcttaaccgagaccgtgaacgac
gcgcccagcaccacgccaaatgacaaacccaaaacactggtggtgaaggtgcagaagacg
aaaaaggacatacccgagagagaaacgtgggttgggaaatttgactttctcctctcttgt
gtcggatacgcaatcggactgggaaatgtgtggagatttccttacttgtgtgggaaaaac
ggcggaggggccttcttgattccctactttttgacgctggtatttgctggcatgcccctg
ttctttctggagacggctctcggtcaatacacttctattggaggtctgggagtgtggaag
ctggccccaatgttcaaaggtgtgggtctggctgctgctgttctatctttttggctcaac
atctattacattgtaatcattgcttgggctatttactatctgtacaactccttcaccact
gacctgccatggaagacatgtggcaatgcctggaacacagatcgctgctacactaactac
agtatcgcggacacgacaaacctcaccagtgctgtggtggagttctgggaacgcaacatg
caccagctgacggacggtttggaaaaacctggggaggtcaggattccactggccatcact
ctcgccattgcatgggtgctcgtctatttctgtatctggaagggggtcagctggacaggc
aaagttgtctacttctcggcaacatacccttactttatgctgttcatcctgttttgccgt
ggcgtcactctgcctggagctattgacgggattctcttctacatcacaccagacttccag
aaactcaaagagtctgaggtatggctcgatgctgccacgcagatcttcttttcctacggt
ctgggattaggttctctgattgcacttggcagctacaatcccttcaataataatgtctac
agagattctatcattgtctgctgcatcaactccttcaccagtatgttcgccggctttgtc
atcttttccattgtgggattcatggctaatgtaacaaagaggccaattgctgatgtggcg
gcctcaggacctggcctggcatttttggcatatcctgaagccgtcacccagctgcctatc
tctcctctctgggccatattgtttttctccatgctgctgatgctgggaatcgacagccag
ttctgcactgtggaaggtttcatcactgcactggttgatgagtttcctcacatcctccga
aagcgtagagaaatcttcatcgctgtcgtctgccttgtttcttatattattggcctgtcc
aacatcacacagggaggactgtatgtgttcaagctctttgactactactcagcgagtgga
atgtccctgcttttcctggtcttctttgagtgtatctcaatttcatggttctatggtgtg
aataaattctttgacaacattgaggaaatggttggctacaggccctgtctgtggtggaag
gcctgctgggttgttttcactcctctcattgtggctggagtgttcttgttcagtgcagtg
cagatggttccccttactatgggagattatgtgttccctagctggggtcagggagttggt
tggttgatggccttatcctccatgactctcatcccaggctacatgggctacatgttcctg
acactcaaaggcacctacaaagagcgcctgcgcatgatgatcaaacctctggttctggtg
aagactcaggaaaatggtccagatcagcaggcagaaagccagaatcaaaaccctgccaat
gaggaagcctacatctaa
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