Xiphophorus couchianus (Monterrey platyfish): 114135394
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Entry
114135394 CDS
T05908
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114135394
Spliceosome [BR:
xco03041
]
Common components
Common spliceosomal components
General mRNP proteins
114135394
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_5
Motif
Other DBs
NCBI-GeneID:
114135394
NCBI-ProteinID:
XP_027858465
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Position
20:3663794..3671530
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AA seq
502 aa
AA seq
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MMADDLDIEAMLEAPFRKEDGKNQSPEGQEERSKRKKRSRSRDRKRSRSRDKKRSRSRER
KGSRSRDRRRSRSRERRRSRSRERGGRYKDHHKHRRRSRSKSPIRKEKSPARLPLDNLTP
EERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEASSV
PLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAANSLQKGTFGPMRLYVGSLHFNITEEM
LRGIFEPFGRIENIQLMMDSETGRSKGFGFITFADAECAKKALEQLNGFELAGRPMKVGH
VTERTDAAAASSFLDNDELDRSGVDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGAI
AIGALAAVSAAMNPPLTMNMSTPALNLPSQPLATHCFQLSNMFNPNSENVPGWELDIQHD
VIEECNKHGGVVHIYVDMNSAEGNVYVKCPSIPSAMAAVNALHGRYFGGKMITAAYVPLP
TYHNLFPESATATQLLVPPVRR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggacgacctggacatcgaggcgatgctggaggctccattcaggaaggaggat
gggaagaaccagagccctgaaggacaggaggagcgcagcaagaggaagaagcgcagccgc
agcagagacaggaaacgcagccgcagtcgggataagaagaggagccgcagccgcgagcgc
aaaggcagccgcagccgcgaccgacgcaggagccgcagccgggagcgcagacgcagccgc
agccgggagcgggggggccgttacaaagaccaccacaagcaccgcagacggtcgaggagc
aagagtccaatcaggaaggagaaaagcccagccaggctgccgctggacaacttgaccccg
gaggagcgggacgcccgcactgtgttctgcatgcagctggcggcccggatacgaccccgc
gacctggaggagttcttctctgctgtggggaaggttcgggatgtgaggatgatctctgac
aggaactcacggaggtcaaagggcatcgcctacattgagtttgtggaggccagctcggtt
cctctggccatcggcctgacaggtcagaggctgctgggggttcccatcatcgtccaggcc
tcacaggcagagaagaaccgagctgctgccgctgctgcagccaatagccttcagaaggga
acgtttggcccgatgcggctctacgtcggctcgctgcacttcaacatcacagaggagatg
ctgagagggatctttgagccgtttggacggattgaaaacatccagctgatgatggacagc
gagacgggccgatctaaaggcttcggcttcatcacgtttgcagacgcagagtgcgctaag
aaggcactggagcagctgaacggcttcgagctggcgggccggcccatgaaggtgggtcat
gtgaccgagcggaccgacgccgctgccgcttcctccttcctggacaacgatgagctggac
cggtccggcgtggacctgggaaccacggggcggctgcagctgatggcccggctggctgaa
ggtacgggcctgcagatccctcctgccgctcagcaggcgctgcagatgagtggcgccatc
gccatcggcgcgctggcggccgtgtcagctgccatgaatccacctctgaccatgaacatg
agcactccggcgcttaacctgccgtctcagccactcgccactcactgtttccagctgtcc
aacatgttcaaccccaacagtgagaacgtgccgggctgggagctggacatccagcacgac
gtcatcgaggagtgcaacaaacacggaggagtcgtccacatctatgtcgacatgaactca
gccgaggggaacgtttatgtgaagtgcccgtccatcccgtctgccatggccgccgttaac
gctctgcacggcaggtactttggaggtaaaatgatcacagcggcgtacgtccccctgcct
acctaccacaacctgttcccagagtctgccactgccacgcagctgctggttccaccggtc
aggcggtga
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