Xiphophorus couchianus (Monterrey platyfish): 114135463
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Entry
114135463 CDS
T05908
Symbol
prdm2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00310
Lysine degradation
xco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
114135463 (prdm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114135463 (prdm2)
03036 Chromosome and associated proteins [BR:
xco03036
]
114135463 (prdm2)
Enzymes [BR:
xco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
114135463 (prdm2)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
114135463 (prdm2)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
114135463 (prdm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
zf-C2H2_6
zf-C2HE
zf-C2H2_jaz
Zn_ribbon_PaaD
zf-C2H2_11
Zf-C2H2_ZNF451_C
Zn_Ribbon_YjdM
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
114135463
NCBI-ProteinID:
XP_027858572
LinkDB
All DBs
Position
20:12925582..12946384
Genome browser
AA seq
1674 aa
AA seq
DB search
MAFSGESVESLEEIPAQVWSGLPEYLNLGPSAVNPSRIGVWATKVIPKGKRFGPFIGEKK
KRSQVTSNVYMWEVYFPARGWMCIDATDPLKGNWLRYVNWARSSEEQNLFPLEINRAIYY
KVLRPIRPGEELLVWYTVEDNPEITAALEEERASRRSSPRSKRARRRLVEKARQAGLGGF
KKTSGAKTTVREMWEGEEGDKEEGERPSGTSQELHEARPLGSTNHKHLQDTSASGVDRGN
YEEDEEEEEDEEEENGDDGCEMQHQTSKQLSEQSSSLLSGSGESHKDPQENLLLAQRGGD
PEQDPDGELEEDLQGESYPCDHCERHFSSRQGLERHIHVHGISNQQAQVFKCRYCNKPFS
SQVGRRRHERRHENGSKKMPGSLAGVGGLLSPAGQTDSSPDCTSPTSQLIAIGTQFDMQR
KELGPHTDRPSMFDENGESKELHPCKYCNKAFGTHTNMRRHQRRIHERHLLPKGVRRKGM
LLQEASAQQPGESPSASPPLVYMPSADTEDEADKDDYAIDISKNISENLSFYIDGKIVST
STASSCEVIEVDTRSAALFGLDTVIISPNQISQALKVEARTNATKPITSNEQPAAKRRTS
TPPLVTSLKVETETAPSPSSSTSSSSNLLVGGLFQQDSSALQREKTIYLSPKLKQLLQTQ
DFQKSTIALITESHRLATLPGASGKYKRRTGSPPSSPQLSPTVKTESCKAEAASGNALKV
PKLESHSVPPPESLLDEEDEDSPSSSGSHASSSGGGSSCNQQPLDLSSSVCKRSDGPNQA
TGDSALDLSVNRKVTTESDLKGGPAPQPLVKKKKPNTSMLEKVLMNEYVGLTLPGEEGPS
TLTTLSCFRTQSPNVASDSAHPSPPSLTPVTINPSSPSSSSVTSPTPPPPILPTIPSPPT
LPGSPQPSDSPLPVLSPKMSPKADEPKHLSDSIENFSSEENKDEEESYISEPQDYPSTPL
QSPPNQSVASSPPGPKTEDLAKNVDVSFSAVCNSLTNGSLTQVEETEISLKANFAALSPQ
PELPSSSKSPPVASNRSSPSAALQSPPQIKVKEEPLHCEDDLSAVNHSPHDSSLPPAALD
KLSTEIREAEEADSTYCKTFVCNVCEEPFDSIKELSSHITDHAADWPFKCEFCVQLFGDE
AAVLAHRTALHGVGRIFLCSVCSKEFAFLCNLQQHQKDLHPNESCTHTTVESGKLRPQNY
TDPSRAKEESAPSTPVPGTPNKNDVSAKEEADVNGNNTEDPNEELYTTIKIMASEGAKPK
GPDVRLGINQHYPSFKPPPFPYHSRSHTGSVASATNFTTHNIPQTFTTAIRCTKCGNSFD
NMPELHKHILVCANASDKKRYTPKKNPIPLKQIVKSPNGMVLPTTTAEAAPEAAAVAGQS
AFRRMGHPKKLNFNQETAKTKMSALSKKKNQLVQKAISQKHRTVSTAKKVVVKSEDVPLS
NVCPHCSREFTYTASLHKHMVISCPMKPAVTKKGKKGLAEVKKEAVSLVDKNTNRKRLPE
DDVQTESQTKPAGKRRARSLTAAEPESTEVSKGKPPSAVGRLKRPAALSAPISARKKPKK
GQAAALPPPPPPPDTPSDTAQRPTMRTQRTGKKPATKRSAVVKPPPTALPAQLKKEERVS
LRKRDRAGGPVTRSSQMANAAPPAEVKTEEQPLQETKDPQVNDVTLVCLCRAVA
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggctttttccggagagtcagtggagagtctggaggaaattcctgctcaggtgtggagc
ggcttgccagagtatctgaatctgggaccgtcggctgtaaatccgagtcgcatcggtgtt
tgggccaccaaagtgatcccaaaggggaaacggtttggtccatttattggagagaagaag
aagaggtcacaggtcaccagtaatgtttacatgtgggaggtctatttcccggctcgggga
tggatgtgcatcgatgccacagacccgctgaaggggaactggctccggtacgtgaactgg
gctcgttccagtgaggagcagaatctgtttccactggagatcaacagagccatttactac
aaagttttgaggcctatccggccaggagaagagctgctggtgtggtacacagtggaagac
aaccccgagataacagctgcgctggaagaagaaagagccagcagaaggagctcacccagg
tcgaaacgagctagaagaaggttggtggagaaagccagacaggctggtttgggcggattc
aagaaaacaagtggagccaaaactactgtcagggaaatgtgggaaggggaagaaggtgat
aaggaggagggtgagagaccatcagggacctctcaggaactccatgaagcccgtccttta
ggaagcaccaaccacaagcatttgcaggacacgtccgcatcaggggtggacaggggaaac
tatgaggaagatgaagaagaagaggaggacgaggaagaagagaatggcgatgacggttgt
gaaatgcagcaccaaacctcaaagcaattatccgagcagtcgagctcgttgctatctggc
agtggagaaagccataaggatccacaggagaacctcctgctagctcagcggggtggagac
cctgagcaggatcccgacggggagctggaggaagacctccaaggagaatcctatccctgc
gaccactgtgagcgccacttctcctccagacagggtctggagcgccatatacacgttcat
ggcatcagcaaccaacaagcacaagtctttaagtgccgatactgcaataaacctttcagc
tcacaagttgggcgccggcggcatgaaagacggcatgaaaacggatccaagaagatgccc
ggctccctggctggagttggcggcctcctcagtcctgcagggcagactgattcaagtcct
gactgcaccagtccaaccagtcagctcatagccatagggacccagtttgacatgcagagg
aaagagttgggaccccacaccgatcgtccgtcgatgtttgatgagaacggggagtcaaag
gagcttcatccctgcaagtactgcaacaaagctttcggcacacacaccaacatgcgcagg
caccaacgcagaatacatgagcgccacctgttgccgaagggagttcgtaggaaaggcatg
ctgctgcaggaggcgtcagcgcagcagccgggcgagtccccgagtgccagccctcctcta
gtctacatgcccagtgccgacacggaggacgaggcagacaaagacgattacgccatcgac
atatccaaaaacatctcggagaacctcagcttctacattgatggcaagattgtgtcaacg
agcacggcaagcagctgtgaggtgatagaagtggacacgaggtcggcggctttgtttggc
ctggacacggtcatcatcagcccaaatcagattagtcaagcactgaaggtggaggcgaga
acgaacgccacaaagcccatcaccagtaatgagcagcctgcagcaaaaagaagaacatca
actcctcccctcgtcaccagcctgaaagttgagacggaaactgccccttcgccttcatcc
tccacgtcgtcctcatccaacctgttggtaggaggacttttccagcaggattcatcagca
cttcagagggagaaaaccatttatctctcccctaaactcaaacagctccttcagacgcaa
gacttccaaaaatcaacaatagccctcattaccgagagccacagactggccacacttcca
ggcgcttcaggaaagtacaaaaggaggaccggttctccgccttcatccccacagctcagt
ccgactgtcaaaactgaaagctgtaaagcagaagcagcgagcggaaacgccctcaaggtg
ccaaagctggaaagccatagtgtgccgcctcctgaaagcctcctagatgaagaagatgag
gattctccaagctcctccggaagccacgcctcctccagcggcggggggagttcctgcaac
cagcagcccttggatctgtccagctctgtctgcaagcgaagcgacggcccaaaccaggcg
actggagactcggctctggatttaagtgtaaaccggaaagtcaccacagaatccgattta
aaaggcgggccagcgccacagccgctggtaaagaagaaaaagccaaacacgagcatgttg
gaaaaggtgctaatgaacgagtacgttggtctaacgttgccaggagaggaggggccttca
accctgacaaccctaagttgttttcgtactcagtcgccaaatgttgcttcggattctgct
cacccgtctccaccctccctgactccagtcactataaacccctcctcgcccagctcttct
agcgtaacgtctccgacgccacctcctcccattctgcccactataccgtctcctccgact
ctccccggctcgccgcagccttcggattcgcccctcccggtcctctcgccaaaaatgtct
ccaaaagctgatgaacccaagcatctgtcagattctattgaaaacttctcatcggaggaa
aacaaggatgaagaggagagttacatttctgagccacaagattacccaagcactccactc
caaagtccccccaatcagtcggtagcatcaagtccacctggacctaaaacagaagatctg
gctaaaaatgttgatgtttctttttctgcagtatgtaacagtctaacaaacggcagctta
acccaggttgaagaaacagaaatatctttgaaagccaattttgctgctctttcccctcaa
ccagaattgccatcatcttccaaatctcctcctgttgcatcaaacaggtcgtctccatca
gctgctttgcaatctcccccacagataaaagtgaaagaagagcctcttcactgtgaagac
gacttgtctgctgtaaaccactcacctcacgactcctcgcttccacctgctgctctcgat
aaactgtccactgaaatccgggaggcagaggaagcggactccacatactgcaagaccttc
gtgtgcaatgtgtgcgaggagccgttcgactccatcaaagagctcagcagccacatcaca
gatcacgctgctgactggcccttcaaatgcgaattttgcgtccagctgtttggtgacgaa
gcggccgttctggcccaccgcacggcgctgcatggggtgggtcgcatcttcctgtgctcc
gtctgttccaaagagtttgcctttctctgtaacctccagcagcaccaaaaggaccttcac
cccaacgagtcatgcacgcatactactgtagagagcggcaagctgaggccgcagaattac
actgacccgtccagagccaaagaggagagcgctccctcaacaccagtgccaggaacgccc
aataaaaatgacgtgtcggcaaaagaggaggccgatgtgaatgggaataacacagaggac
cccaacgaggagctgtacactacaataaagatcatggcttccgagggagcgaagcctaaa
ggtcccgacgttcgacttggcatcaatcaacactatcccagtttcaaaccaccacctttc
ccctaccacagccgctctcacactggttctgtggcctctgctacaaacttcactacccac
aacataccgcaaaccttcaccactgccatccgctgcaccaaatgcggcaacagctttgac
aacatgcccgagctgcacaagcacatactggtgtgtgccaacgccagcgacaagaagcgt
tatactcccaagaaaaacccgattcccctaaagcaaattgtgaagagccccaatggcatg
gtgttgcccaccacaacagctgaggctgcaccggaggccgccgccgtcgcaggtcagagt
gcgttccgtcggatggggcatccaaagaaactcaacttcaatcaggaaactgctaaaacg
aaaatgagcgccctgagtaagaaaaagaaccagctggtccagaaggcgatctcgcagaaa
catagaaccgtcagtactgcaaagaaggtggtggtcaaatctgaagacgtgccgctgtcc
aacgtctgcccccactgcagccgggagttcacctacacggctagtctgcataaacacatg
gtcatcagctgccccatgaaacctgccgtcactaaaaagggcaagaaagggttggcagag
gtgaaaaaagaggctgtttctttagtggataagaacacaaataggaagagacttccagaa
gacgatgtgcagacagagtcacaaactaaacctgcgggaaagagaagagcgcgaagttta
actgcagcagagcctgaatccactgaggtgagcaaaggaaagcctccttctgcagtgggt
cgattaaaaaggcctgccgcgctctctgcacctatttccgcccgcaaaaaacccaaaaag
ggccaagctgcggctctacctccccctccgcctcctcctgacactcccagtgacacagca
caacggccaaccatgagaacgcagcgtacgggcaaaaagccagcgactaagagatcagca
gtggtcaaaccgccaccaacagcgctgccagcacagctgaagaaagaggagcgtgtctcg
ctcagaaagagggaccgagccgggggtccggtcaccaggagctcacagatggccaacgct
gctcctcctgctgaggtgaagactgaggagcaaccgctgcaagagacgaaagacccccag
gtaaacgatgtcacgttagtatgtttatgtagagcagtggcttaa
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integrated database retrieval system
