Xiphophorus couchianus (Monterrey platyfish): 114135475
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Entry
114135475 CDS
T05908
Symbol
mars
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic isoform X1
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00450
Selenocompound metabolism
xco00970
Aminoacyl-tRNA biosynthesis
xco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
114135475 (mars)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
114135475 (mars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xco01007
]
114135475 (mars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xco03016
]
114135475 (mars)
Enzymes [BR:
xco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
114135475 (mars)
Amino acid related enzymes [BR:
xco01007
]
Aminoacyl-tRNA synthetase
Class I (U)
114135475 (mars)
Transfer RNA biogenesis [BR:
xco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
114135475 (mars)
Prokaryotic type
Other AARSs
114135475 (mars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_2
GST_C
GST_C_3
GST_N_2
GST_N_3
tRNA-synt_1e
HTH_23
DUF7140
Motif
Other DBs
NCBI-GeneID:
114135475
NCBI-ProteinID:
XP_027858585
LinkDB
All DBs
Position
20:10792939..10808553
Genome browser
AA seq
921 aa
AA seq
DB search
MELFVSEGNPHCLKVLAALEVTGVQCGVQFLNHEGKVVPFLPRPAVPTLFLPSGQHLFSS
NTICRYLFELNGPESSDQCNQWLEWEATILQPALLRALHLAVLQGKGSEVPKVLQGPLNV
LDQSLAKGSMAYLTGEAVSVADVVLWGALHPVLSVSSLELSDHKLAKAWFDRVAAVRGCQ
SAAQKVLQGKGLEAMKSYMQKQPAPQSRDTQPCNSSPAENDEGERTVSEEEMEAAALTWS
KDLNACSYPAEKQHPVMPQEGNRNVLITSALPYVNNVPHLGNIIGCVLSADVFSRYGQLR
GWNVLFVCGTDEYGTATENKAREEGLTPQQICDKYHAVHSSIYKWFQIDFDFFGRTTTEK
QTEIAQDIFWRLHKNGFLVEDTVEQLRCENCQRFLADRFVEGMCPYCSYPEARGDQCDKC
GRLINAVELREPQCKVCRQTPEIRSSKHLFLDLPKLETQLENWLERSTSSGDWTANAKQI
TRSWLRDGLKPRCITRDLQWGTPVPHPDFKEKVFYVWFDAPIGYLSITANYTNEWEKWWK
NPHQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVSHLIATEYLNYEDTKFSKSRGVG
VFGDMAKDTGIPSDVWRFYLLYVRPEGQDSAFSWADMALKNNSELLNNLGNFINRGGMFV
TKFFGGCVPAMELQQEDKKLLAVVGWELQQYIQLMDKVKIRDALKHILNISRHGNQYIQV
NEPWKKIKGGESERQRAGTVTGVSVNIACLLSVMLLPYMPAVSQTIRDQLNAPQTCINTM
LQGPGTFVCALRAGHRIGTVSPLFQKLEADQIEALKKRFGGQQPEDEPSNKKITASTQPA
AVPAPPVVAEVKVVDGSDPEKAKQLAEAVAEQGDKVRALKSQKAEKAIITAEVSKLLDLK
KQLALAEGKSPEPAPQKGKKK
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtttgttagtgaaggcaacccgcattgtctgaaggtgttagctgcactggaa
gtaacaggagttcagtgcggcgttcagttcctcaaccacgaagggaaggtggtgcctttc
ctcccccgtccagctgtgcctactctttttctacccagtgggcagcacctttttagctcc
aatactatttgcaggtacctgtttgagttaaatggaccagaatctagtgatcagtgcaat
cagtggcttgagtgggaagccacaattctccagcctgcactgctacgggctcttcacttg
gcagtgcttcagggaaaagggtcagaggttcccaaagttctccagggtcccctaaatgtc
ttggaccaaagcttggccaagggcagcatggcatatttaactggggaagctgtttcagtt
gctgatgttgttttatggggtgccctgcatcctgttttatccgtctcttctctagaattg
agtgatcataaattagcaaaggcttggtttgaccgtgttgctgcggtgcgtggctgtcag
tctgcagctcagaaagtgctgcagggaaaaggcctggaggccatgaagagctacatgcag
aagcagcctgcacctcagagcagagacacacagccatgcaacagcagccctgctgagaat
gatgaaggggagcgtaccgtttcagaagaggagatggaagcagcagctctcacctggagc
aaggatttaaacgcctgctcctatccagctgaaaagcaacatccagttatgccacaagag
ggcaaccggaatgtcctcatcactagcgccttgccatatgtcaacaatgtcccccacctg
ggtaacatcattggctgtgtccttagtgcggatgttttctccagatacggccagctgcga
gggtggaatgtgttgtttgtctgtggcacagatgagtacggcacggctactgagaacaag
gccagagaggaaggcctgacaccgcagcagatctgtgacaagtaccatgctgttcactcc
agtatctacaaatggttccagattgactttgacttctttgggagaaccaccactgagaag
cagacggagatcgctcaggatatattctggcgactccacaagaatggatttcttgttgaa
gacacggtggaacagcttcgctgtgaaaactgtcagcgcttcctggctgaccgctttgta
gagggaatgtgtccctactgcagctatccagaggctcgcggtgatcagtgtgacaagtgt
gggcgcctcatcaacgccgtggagctcagggaacctcagtgcaaagtctgcaggcagact
ccagaaatccgctcctccaaacatctgttcttggacctgccaaagctagaaactcagttg
gagaattggctagagagatcaaccagctctggagactggacagcaaacgccaaacagatc
actcgctcttggctcagagatggactcaagcctcgctgcatcaccagggacctgcagtgg
ggaacaccagtacctcacccagactttaaagagaaggtgttctacgtttggttcgatgct
cctattggttatctgtctattactgccaactacaccaacgaatgggaaaagtggtggaaa
aatcctcatcaggtggagctgtacaacttcatggcgaaggacaatgtgccgttccacagt
gtggtgtttccctgctccctactgggagcccaggacaactacactctggtcagccatcta
attgctactgaatatctgaactacgaggacacaaagttctcaaagagccgtggtgtcggt
gtgtttggtgacatggcgaaggacactggcatcccttcggacgtatggcggttctacctc
ctgtatgtgcgtccagaaggacaagattcagctttttcttgggctgacatggccctaaag
aacaactctgagctgctcaacaatttggggaacttcatcaacagaggagggatgtttgtg
accaagttttttggaggatgcgtgcctgcgatggagctacagcaggaagacaagaagctc
ctggctgtggtgggctgggagctgcagcagtacatccagcttatggacaaagtcaagatc
cgcgatgccttgaagcacatcttgaacatttctcgccatggtaaccaatacattcaagtc
aatgagccctggaagaaaataaagggaggagagtcagaaaggcagcgcgccggcaccgtg
acgggcgtttctgtgaatatcgcctgcttgctgtcggtgatgctcctgccttacatgcca
gcggtcagccagaccatcagggatcagctcaacgctcctcagacttgcatcaataccatg
ttgcaaggccccggcaccttcgtgtgcgccctgagagcgggccaccgcatcggcaccgtc
agtccattattccagaaactggaggcggatcagatcgaggctttgaagaagaggtttggt
ggacagcagcctgaagacgaaccatctaataagaagattactgctagcactcagcccgct
gcagttcctgctcctcccgttgttgccgaggtgaaggtggtcgacggatcggatcccgaa
aaagccaagcagctggcggaagctgtagccgaacagggcgacaaggttcgagcgcttaaa
tcccagaaagcagaaaaggctataatcacagcagaggtttccaaacttttagaccttaag
aaacaactggctcttgctgaagggaagagccctgagcctgcacctcagaagggtaagaaa
aagtga
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