Xiphophorus couchianus (Monterrey platyfish): 114135515
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Entry
114135515 CDS
T05908
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like isoform X1
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04020
Calcium signaling pathway
xco04218
Cellular senescence
xco04260
Cardiac muscle contraction
xco04261
Adrenergic signaling in cardiomyocytes
xco04270
Vascular smooth muscle contraction
xco04530
Tight junction
xco04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114135515
04020 Calcium signaling pathway
114135515
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
114135515
09144 Cellular community - eukaryotes
04530 Tight junction
114135515
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
114135515
09153 Circulatory system
04260 Cardiac muscle contraction
114135515
04261 Adrenergic signaling in cardiomyocytes
114135515
04270 Vascular smooth muscle contraction
114135515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114135515
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
114135515
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
FAM176
YVC1_C
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
114135515
NCBI-ProteinID:
XP_027858660
LinkDB
All DBs
Position
20:15948552..16023842
Genome browser
AA seq
2136 aa
AA seq
DB search
MSANRPAPEPAPEAPPISTPAPASAPTPAPAPAPPPPAPPAPTSSTIPVGALAQKKRQQY
AKSKKQGSNANSRPPRALFCLKLNNPLRRACISVVEWKPFDIFILIAIFANCMALAVYVP
FPEDDSNSTNHDLETVEYAFLIIFTIETFLKIIAYGLVMHQNAYVRNGWNMLDFVIVVIG
LFSVVLEFLTKEDKGEGDRESSHPSSTHGHGGKPGGFDVKALRAFRVLRPLRLVSGVPSL
QVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHATCYIGGTDLVAEDDPAPC
AISGHGRQCPINGTQCREGWHGPNGGITNFDNFLFAMLTVFQCITMEGWTDVLYWMNDAM
GFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKG
YLDWITQAEDIDPDNEDEAEEGSKRNRVTLADLTEKKKGRFGWFSQSSDTHASVPASETE
SVNTENQNGEEEKTPCCGPLCQKISKSKFSRRWRRWNRFCRRKCRLAVKSVPFYWLVIIL
VFLNTLTISSEHYNQPMWLTQVQDVANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDC
FVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWQSLSNLVASLLNSMKSIAS
LLLLLFLFIIIFSLLGMQVFGGKFNFDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMY
DGIQAYGGPSSSGMVVCFYFIILFICGNYILLNVFLAIAVDNLADAESLNTDEGDKKEDK
KDDDKDEKEEEEEEDNDDNGGDEEDPEVPSGPRPAIADLVKKEKIIPIPEGSAFFIFSNT
NPVRVFCHQLINHHIFTNLILVFIMLSSVSLAAEDPIRNFSARNIILGYFDYAFTAIFTV
EIVLKVLGYADYVFTSMFTFEIVLKMTTYGAFLHKGAFCRNYFNLLDLLVVGVSLVSFGI
QSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACI
GVQLFKGKFYRCTDEAKSSPVECKGTYILYKDGDVNQPTIHRRVWHNSDFNFDNVLMAMM
ALFTVSTFEGWPALLYKAIDSNRENLGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVI
VTFQEQGEKEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVNSTGFEYIMF
VLIMLNTLCLAVQHYGQSALFNYVMDILNMVFTAVFTVEMVLKLIAFKPRHYFADAWNTF
DALIVVGSVVDIAITEVNPTETPQVDEMGNTEDSARISITFFRLFRVMRLVKLLSRGEGI
RTLLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFGKIAMVDGTQINRNNNFQTFPQAV
LLLFRCATGEAWQEIMLACMPGKLCDPESDYNPGEEMTCGSGFAIIYFITFYMLCAFLII
NLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPL
GFGKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAV
IKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEEGLVTAHPSQNN
TAIALQAGLRTLHDIGPEIRRAISCDLQDDELVDFIPEEDEEIYRRNGGLFGNHLMNGGH
RRANGHQTNTTQRPLQVQPPPHYAHMEQPVGRLSRANAMAHPNHHHHHHHHHHRHHNSYG
KSPKSTNINLNNANMSSLPNGGHHIYYERAPPNGYPGLRTSYYDYNKPRTPQGQRRRYYE
TYVRSQRGDGHHPIIRREEEIDEDRFSGEYYSGEEFYEEDSMLSGDRYQTSDTEYETPKG
YHHPDSYYDDDEQPLYRDSRRSPKRRLLPATPQGHRRPSFNFECLRRQSSQDELPHQRTA
LPLHLMQHQVMAVAGLDSSRVHCLSPTRSTRSWATPPATPASKDQSPYYTPLIRVDGPHR
ESISGSHVSVRKSSWYTDDPEYSQRTYSPIHLQVPPEYHHQYHQKRGSATSLVEAVLISE
GLGRYAKDPKFVAATKHEIADACEMTIDEMESAASHLLSEGIAPGINGVNVFPLLAPRDY
ELPDTGASYSDEEPETEPRAPYEEDLADEMICITTL
NT seq
6411 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaacaggcctgccccagaaccagccccagaagcccctcccatctcaaccccg
gctccagcatcagcccctactccggccccagccccggcgccacccccacccgccccacct
gccccaacatcctctaccataccggtaggtgcgttggctcagaagaagcgacagcagtat
gccaaaagcaagaagcaaggcagcaacgccaacagcaggccaccgagggctcttttctgc
ctcaaactcaacaaccccttacgcagggcctgcatcagtgtggtcgagtggaagccattt
gacatctttatattaattgccatttttgccaactgtatggccttagctgtctacgtccct
tttcctgaagacgattccaactccacaaaccacgatttggaaacagttgaatatgccttc
ctcatcattttcactattgagacctttctgaagattatcgcttatggtttggtgatgcac
cagaatgcatatgtgagaaatggctggaacatgctggattttgtcattgtggttatcgga
ctcttcagtgttgttttggaatttttgaccaaagaagataagggagaaggtgacagagag
agtagccatccgtcgtcgacacatggccacgggggtaaacccggtggatttgacgttaaa
gcccttcgagccttccgtgtgctgcgacccctgcggctggtctcaggagtacccagttta
caggtggtgttgaactccatcattaaagccatggttcctctgctgcacatcgccctcctt
gtcttgtttgtcatcatcatctatgccattattggcctggagcttttcatcggtaaaatg
catgcaacctgctatataggcggcacagatttggtagcagaggatgatccagctccctgt
gcgatctcagggcacgggcgccaatgccccatcaacggcacacagtgcagagaaggctgg
cacggccccaacgggggcatcaccaacttcgacaactttctgtttgccatgctgacggtg
tttcagtgcatcaccatggagggctggacagacgtgctctactggatgaacgatgctatg
ggctttgagcttccatgggtttactttgtcagtcttgtgatcttcggctcctttttcgtt
cttaacctggttttgggtgtgttgagcggagagttctctaaggagagagaaaaagctaaa
gctcgaggagacttccagaagctgcgtgagaagcagcagctggaggaggacctgaagggc
tacctggactggatcactcaggctgaagatattgaccctgacaacgaggacgaggctgag
gaggggagcaagcgaaaccgggtgactctggctgacctcaccgagaagaagaaaggaagg
tttgggtggttcagccagtcgtccgacactcatgcgagcgttccagccagtgaaacagag
tctgtgaacaccgagaatcagaacggagaggaagaaaagacaccctgctgtggacctttg
tgtcagaaaatctcaaagtcaaagttcagtcggcgctggcgtcgctggaacaggttctgc
cgcaggaagtgccgtttggctgtgaagtcagtacctttttactggctggtcatcatcctg
gtgttcctcaacacactcaccatctcatcggagcattacaaccagcctatgtggttaaca
caagttcaggatgtggcgaacaaggtgctgctggccctcttcacatgtgaaatgctagtg
aagatgtacagtctgggactccaggcctactttgtgtccttgttcaaccgctttgactgc
tttgtggtgtgcggaggaatcaccgaaaccattctggtcgagctggaaatcatgtctcct
cttgggatttctgtgtttcgctgtgtccgtctcctgaggatctttaaggtcacgcggcac
tggcagtctctgagtaacctggtggcatctctgctcaactcgatgaaatcaattgcttcc
ctgctgctgctcctcttcctcttcatcatcatcttctccctgctgggcatgcaggtgttt
ggtggaaagttcaactttgacgaaacccagacgaagagaagcacctttgacaactttcct
caagccctcctcactgtgtttcagatcctgactggagaagactggaacgctgtcatgtat
gatgggatccaggcgtacggaggcccctcctccagcgggatggtcgtgtgtttttacttc
atcattctcttcatatgcggaaactatatcctcctgaatgtcttcttggctatcgctgtg
gacaacctggcagatgcagaatcactcaacacagatgaaggagacaaaaaagaggacaaa
aaggatgatgacaaagatgaaaaggaagaagaagaagaagaggacaatgatgacaatgga
ggagatgaagaagacccagaggttccatcaggtcctcggccggccatcgctgacctggta
aagaaggaaaagatcattccgatcccagagggaagtgccttcttcatcttcagtaacaca
aacccggtgcgagtgttttgtcaccaactcatcaaccaccacatattcaccaacctcatc
ctggtgttcatcatgctcagctcggtgtcgctcgctgccgaagacccgatccggaacttc
tccgcccgcaacattatacttggttactttgactatgctttcaccgctatctttactgtt
gagatcgtgttgaaggtcctaggctatgcagattatgtcttcactagtatgtttacattt
gagatcgtattgaagatgacaacatatggagcttttctccataagggagcattctgcagg
aattactttaacctcctggatctcttggtggtcggggtttctcttgtctctttcggcatt
cagtcttcggccatctctgtggtgaagattctccgagttcttcgagtgcttcgacccctg
agggccattaatagagccaagggccttaaacatgttgttcagtgtgtctttgtggcaatc
agaactattggcaacatcatgattgttaccactctacttcagtttatgttcgcttgtata
ggtgtccagctatttaagggaaaattttaccgctgcacagatgaggccaagtccagtcca
gtagaatgcaaaggcacatacatcctgtataaggatggagatgttaaccagccgacgatc
cacaggcgggtgtggcacaacagcgacttcaactttgacaatgtccttatggccatgatg
gccctctttactgtttccacgtttgaaggctggccggcgttgctgtacaaagccatcgac
tccaacagggagaatctgggacccatttacaactaccgtgtggaaatttccatcttcttc
atcatctacatcattatcattgctttctttatgatgaacatctttgtgggttttgtcatc
gtcacatttcaagaacaaggagagaaggagtataaaaactgtgaacttgacaagaaccag
cgtcagtgtgtggagtatgctctgaaggcccgtcccctgaggagatatattcccaagaac
ccataccagtacaagttttggtatgtggtgaactccactggctttgagtacatcatgttt
gtgctcatcatgctcaacacgctctgcttggctgtccagcactatggccaatcagcactt
tttaattatgtaatggacattctcaatatggttttcactgctgttttcactgtggaaatg
gttctcaagctcatcgcattcaaaccaaggcactattttgctgatgcttggaacactttt
gatgccttaattgttgttggtagcgtcgtcgatattgctatcactgaagtgaacccaacg
gagactcctcaggtggatgagatggggaacacggaggacagtgctcgcatctccatcact
ttctttcgcctgtttcgagttatgcggttggtcaaactcctcagcagaggagagggtatc
cgcacattgctgtggactttcattaagtccttccaggctttgccatatgttgctctattg
atagccatgttgtttttcatctatgctgtcatcggcatgcaggtttttggaaagattgcc
atggtcgatggaacacaaattaacagaaacaacaacttccagaccttcccccaggctgtg
ctccttctttttaggtgtgccacaggtgaggcatggcaggagataatgttggcctgtatg
cccgggaaactgtgtgacccagagtctgactacaaccccggggaggagatgacttgtggc
agtggatttgcaataatttatttcattaccttctacatgctctgtgctttcttgatcatc
aatttgtttgtggccgtcattatggacaactttgactatttgacacgtgattggtcaatt
cttggtcctcaccaccttgatgaatttaagaggatttggtcagagtatgatcctgaggca
aaaggaaggatcaaacatctagatgtggtgactttgcttcgtcgtatccagccccctctt
ggttttggtaaactgtgtcctcacagagtagcatgcaagcggttggtggccatgaacatg
cctctcaacagtgatgggacggtcatgtttaatgctacactgtttgccctggtgcgcaca
gctctgaaaataaaaactgaaggtaacctggaacaggccaatgaagagctgcgggccgtc
atcaagaaaatctggaagagaactagcatgaagctgctggaccaagtggtgcctcctgct
ggtgatgatgaggtaaccgtggggaagttctatgccaccttcctgatacaggactacttt
aggaaattcaagaaacgtaaagaggaaggcctggtgactgcgcacccttcccagaacaac
acagccattgccctgcaggctggccttcgcacgctgcatgatattgggcctgaaattcgc
cgagcgatatcatgtgacctgcaggatgacgagctagttgactttattccagaggaagac
gaggaaatatataggcgtaacggcggcctcttcggtaaccacctaatgaacggcggccat
cggcgagccaacggccatcaaaccaacaccacacagcgccccctgcaggtgcagcccccg
cctcattatgctcacatggagcagccagtggggcgtctttctcgagctaatgcaatggct
caccccaaccaccatcatcaccatcaccaccatcatcaccgccaccacaactcctacggc
aaatctcctaaatccaccaacatcaacttgaacaacgccaacatgtccagtctgcccaac
ggaggacaccatatctactacgaacgcgctcctccaaacggatacccaggtttacgcacc
tcctactatgactataacaagccacggacgccccagggtcaaagaaggcgctactatgag
acgtatgttaggtcccagagaggagacggccatcaccccatcatccgcagggaagaggag
attgatgaggatcgcttctctggggaatattacagcggagaggagttttatgaggaggac
agcatgttgtcaggggacagatatcagaccagtgacacggagtatgaaactccgaaaggt
taccatcaccctgacagttactatgacgatgatgagcagcctctctaccgggactcacgg
aggtcaccaaagagaagactgcttcctgccacacctcaaggtcacagaaggccttccttt
aactttgagtgtttgcgcagacaaagtagccaggatgagcttccacatcagcgtactgct
ctaccactgcaccttatgcagcatcaggtaatggctgtagcaggcctggactccagcaga
gtccactgcctctcccccacccgctccactcgctcctgggccacccctcccgccacccca
gccagtaaagaccagtcgccatactacacccccctcatccgcgtggacggtccacacagg
gagagcatctctggcagccacgtgtctgtgcgcaagagctcctggtacacagacgatcca
gagtattcccaaaggacgtattcgcccatccacctgcaggttcccccggagtaccaccac
cagtaccaccagaagagaggcagcgccaccagccttgtagaagcggttttgatatcagag
ggtctcgggagatacgccaaggatcccaagtttgttgctgccacaaagcacgagatagca
gatgcatgtgagatgacaatagacgagatggagagtgcagccagccacctgctgagcgaa
gggattgctcccggcatcaacggggtcaacgtgttcccccttctggcccccagggattat
gagctgccggacaccggagccagttacagtgacgaggagccagagaccgaacccagagct
ccttacgaggaggacctggcggatgagatgatctgcattacgactttatag
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integrated database retrieval system
