Xiphophorus couchianus (Monterrey platyfish): 114135642
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Entry
114135642 CDS
T05908
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04620
Toll-like receptor signaling pathway
xco04621
NOD-like receptor signaling pathway
xco04622
RIG-I-like receptor signaling pathway
xco04623
Cytosolic DNA-sensing pathway
xco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
114135642 (irf7)
04621 NOD-like receptor signaling pathway
114135642 (irf7)
04622 RIG-I-like receptor signaling pathway
114135642 (irf7)
04623 Cytosolic DNA-sensing pathway
114135642 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114135642 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114135642 (irf7)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
114135642 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
114135642
NCBI-ProteinID:
XP_027858898
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All DBs
Position
2:19683851..19687409
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AA seq
440 aa
AA seq
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MQSPPKPQFASWLIEQVETGQYMGLCYVDQNKFRVPWKHNSRKDCNDEDSKIFRAWAVAS
GKINEFPNDKARWKTNFRCALNNLSQRFKMITDNSKNQDDPHKIYEIMNTDSNYEGMPMQ
ESQEESDMTPDIFSPITEYFPTGNEHNLHQDFMALDLGNQSAEEQLWTRHNNPVLSCLTA
TENLPQYLPADQTAYNQAVNASPVISSPQPSSLYDLEISIHYRKKEMLKTTLHTNRLQLH
YHSEDPKFNASYLCFPSTESLLDHKQIEYTNRILSSIQRGLLLEVHETGIYARRHDNCHV
FASTSDPNVAHPNPQKLPKNTVVELLSFDKYVNELKHFKENNGRSPEYTINMCFGEKFPE
GKPLEKKLVVVKVVPLICRYLHDMAQMEGASSLHSANISLQISHNSLFDLISSVFSLPGA
EEQLTIGVPFIDQTGNLISH
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtccacccaagcctcagtttgccagttggctgatcgagcaagtggagacgggc
cagtacatggggctgtgctacgtggatcaaaacaaattcagagtgccgtggaagcacaac
tccaggaaagactgcaacgatgaggacagtaaaatattccgggcctgggcagtggcgagt
gggaaaatcaacgagttccccaatgacaaggccagatggaaaaccaacttccgctgtgct
cttaacaacctgtctcagcgcttcaagatgatcacagataattccaagaatcaagacgac
cctcataaaatctatgagattatgaacactgacagcaactatgaaggtatgccaatgcaa
gaatcccaggaggaatctgacatgactccagatatattcagcccaatcacggagtatttt
cccacaggaaatgagcacaatctgcatcaggacttcatggccctggatcttggcaaccaa
tcagcagaagagcagttgtggacacggcataataatcctgttctcagttgtcttaccgca
actgagaaccttccgcaatatttaccagccgatcagacggcctacaatcaagcagtaaat
gcttctccggtgatcagttcacctcagccgtccagtctgtacgacctggagatctccatc
cattacaggaagaaggaaatgctgaagacgacgctacatactaaccgtcttcagctccac
taccacagcgaggaccccaagttcaacgcctcttatctctgctttccttccactgagagc
ctactggaccataaacagattgagtacaccaaccgcatactgagcagcatccagcgaggc
ctgctcttggaggtacatgagaccggtatctatgccaggaggcatgacaactgccacgtg
tttgccagcaccagcgaccccaacgtagctcatccaaacccccaaaaattgcccaaaaac
acagtggtggagctcctcagttttgacaaatatgttaatgagctcaaacatttcaaggag
aacaatggccgctctcctgaatacaccatcaacatgtgctttggagagaagtttccagag
ggaaaaccgctggaaaagaagcttgtcgttgtgaaagtggtgcctctaatttgtcgatat
ctgcatgacatggcccagatggagggggcttcatctcttcacagcgccaacatcagcctg
cagatttcacacaacagcctctttgacctcatcagctctgtgttttctctaccaggagct
gaagagcaactaaccattggtgtgcctttcatcgatcagactggaaacttgatttctcac
tga
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