Xiphophorus couchianus (Monterrey platyfish): 114135672
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Entry
114135672 CDS
T05908
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xco01001
]
114135672
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114135672
Enzymes [BR:
xco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
114135672
Protein kinases [BR:
xco01001
]
Serine/threonine kinases: Other
Other
114135672
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
114135672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
LisH
WAPL
DUF948
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
114135672
NCBI-ProteinID:
XP_027858967
LinkDB
All DBs
Position
20:8423552..8442671
Genome browser
AA seq
1584 aa
AA seq
DB search
MRPRRFSRQLRAAMSSQDEDPSPAMSAVLSSAWSAALSAAVAVAMAVDAKADLARLLDEW
EETRQGTTEQLVSILTRISELIEQETEEYYKSDPDPFDDRHPGRADPNCMLGQLLRMLFL
NDDFTNSLLDTYIMSSRDISLNTAACRLLQNIVPGLDTAVVFEEKEGLVGKLFTWAREAE
RPLCIYATGLLAKAMSNQEVATSHKEENAELVSMMIKRLHELQSAEHTSCFSPTHTAQNL
PQDSQDEAPHTSSVTKHQQIQSGFSEEETEENNVAESSRSISKGKSLAQRNSGGSSSSAR
LLPTVVYQATPHLTSKEKDDTQGGEEGGGGGTKQVENEKKTKQKLQFTTSASGTEDEAEV
TATSEKPSGSSSWSEMSSILIGSEYRLLPLSPTMEQRLILQYLTPLGDYQELLAIFMKLD
TCSLMMNYIDLRKTKNVQLTFDALLYLASLLLHKKFASEFIAHGGVQKLLEIPRPSMAAT
AVSLCLYYLAYNQDAMERVCMFPGDVLTDLVSYALWLLESSHASGICHATMFFSISFSFR
VVLQLFDQLDGLRRLVNLISTLEILNTDNDAPLMNEDQVFSNRQTAKHTCMALRRYFESH
LALKTEQMKQSLHTSESGTIIPQQSPYKAYANTREQIIEMMEFLIECGPPEGPWEPVQVF
YKLSCIPLMLQLISAACDWKTYYGRSDIVRFALDILAILTVVPKVQLVLTDTVEVIDENR
SPVPTVGMSIILGVAEGEVFPNDAEIQKSALQVIINCVCAPDQSLSAFAVAPLRQPLHPQ
QPPPSHNRVLAHMWQVVQNNNGIKVLLSLLSVKVPITDADLIRALACKALVGLSRSSAIR
QIISKLPLFASGHIQQLMKEPVLQDKRSEHVSFCRYAARLTERVSGKPLIMGAEVSLSRL
QKANVVAQTRITFSEKELLILIRNHLVAKGLHDTANTLVKEANLPAASLFPNSASSGVTP
TSSTSKSRTCRFAGGVAARIAANIGPSPLSSGNSAPTTPSTARSSAIPHSSGSLVSTSAA
PNTPPHAGQSSHLVGRILFSRERPVASCSSGKKLRALRQKSDHGAFIQTPAMKKQLERHL
PSPPTLDSIITEYLREQHARCSNPVTTCPPFSLFNPHRCPESKQRRQASPNFTARLGSRM
LCPKYRGVDRGSLDRQLIFSRFRPVSVFRENNGGDSSFTCCAFSARERFLMLGTCSGHLK
LYNIFSGEEAADYTCHGSAISHIEPSRDGNFVLTSASWSVPLSALWSMDSVFTMKNSFGE
DHYVEFSKLCQDRVIGTKDQVAHIYDIQTGQEVLTLNDPALANNYKRNCATFNPTDDLVL
NDGVLWDVRASRAIHKFDKFNMNLSGVFHPNGLEVIINTEIWDLRTFHLLHTAPALDQCR
VVFNSNGTIMYGAMLQADDDHDVMDQQVTSPFGSSFRTFDATDYKPIATLDVKRNIFDLC
TDTKDHYLAVIENQDAVTIDTVCRLYEVGRQKLAEEGDDDDQDEDQNNDSSDTDDDDDDD
DDDDMDIEPLIEELANDEQEDQEQANLPVDDAIEALLGNTSGDDGDDDDTDHDSETLDHG
GSWFGEESDDDDPDMFGSLPDLWF
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgcgacgattctcacggcagctgagggctgcaatgtcctcccaagatgaagat
ccatcacctgccatgtctgctgtgctgtcttctgcatggtcagccgctttatcggctgcc
gtggccgtcgccatggctgtggacgccaaagcagatctcgccagactgttggacgagtgg
gaagagacacggcagggtaccacagagcaactggtgtccatcttaacaagaatatctgag
ctgattgaacaagagacagaagaatattacaaatcagaccctgatccctttgacgatcgt
catccaggacgagctgacccaaactgtatgctagggcaactgctgaggatgctgttttta
aatgatgacttcactaattcgcttttggacacgtatatcatgagcagtcgagacatcagt
ctcaacacagcagcatgtcgcctccttcagaacattgtcccaggtctggacacagctgtc
gtctttgaagaaaaggaaggtctggttgggaagttgttcacgtgggctcgtgaagctgag
cggccattatgcatctatgccacaggccttctggccaaagccatgagcaaccaggaagtg
gccacgagccataaagaagaaaacgctgagttggtatccatgatgatcaaacgtctacat
gagttgcagtctgcagagcacacgagttgcttcagtcccacccacactgcccagaatcta
cctcaagactctcaggatgaagctccccatacatcgagtgtcacaaaacatcagcaaatc
caatcaggattttctgaggaagagacagaagaaaacaatgttgcagagagcagcaggtcg
atttcaaagggcaaatctttggcccagagaaacagtggtggtagcagcagctcagctcgc
cttcttccaactgttgtgtaccaagctaccccacatctgacttcgaaggagaaggacgac
actcagggaggagaggaaggaggaggaggagggacgaaacaggttgagaatgagaagaag
actaaacagaaactccagtttactacgtccgccagcgggactgaggacgaggccgaggtg
actgctaccagcgagaagccaagcggcagctcatcctggtctgagatgagctccattctg
attggctcagagtaccgattgttgcccctgagcccaaccatggagcagaggctcatcctg
cagtatctgacaccactcggagattaccaggagctgcttgcaatctttatgaaactggac
acttgttcgctgatgatgaactacatcgaccttaggaagaccaaaaatgttcagcttaca
tttgatgcgctgttgtatctcgcctcactactccttcataagaagtttgcgtctgaattc
attgctcatggaggagtgcagaaactcctggagatcccgagaccatccatggcagcgaca
gccgtttctctctgcctctactacctggcatacaatcaggatgcaatggagagggtgtgc
atgttcccaggggatgtgctgacagacctggtgtcctatgctctgtggttgttggagtcc
tcccacgcttcaggcatctgccacgccaccatgtttttctccatttctttttcgttcagg
gtggtgttgcagctctttgaccagctggatggtctacgcaggctggtcaatctgatcagc
actttggagatcctcaacacagacaacgatgcaccactgatgaatgaagaccaggtgttc
tccaacagacagacggctaagcacacctgcatggcactgcgcaggtactttgagtctcac
ctggcattgaagacagaacagatgaaacagtctttgcatacttcagaaagcggcaccatc
attcctcagcagtcaccttacaaggcatatgcaaataccagagagcaaataattgagatg
atggagtttctcatcgagtgtggacctcctgagggcccctgggagccagttcaagtcttc
tacaagttgtcctgtattcctttaatgctgcagctcatatctgcagcctgtgactggaag
acctactatggcaggagtgacatagttcgctttgctttggacatcctggctatcctgaca
gttgttcctaaagttcagttagtactgactgataccgtggaagttatcgatgaaaacagg
tcccctgttcccactgtaggtatgagcatcattctgggtgttgctgaaggtgaagtgttt
cccaatgatgctgagattcagaagtctgctttgcaagtcataataaactgtgtgtgcgct
ccagaccagagcctcagtgcttttgctgttgcccccctcagacagcctttgcaccctcag
cagccccctccctcccacaacagggtgctggcccacatgtggcaagtagtgcagaataat
aacggcataaaggtgctcctgtctctgctgtcggtgaaggttcccatcacagatgcagac
ctgatcagagctctggcctgtaaggctctggttggactctctcgtagctccgccatcaga
cagatcatcagcaagttgccactgttcgccagcggtcacattcagcagctcatgaaggag
ccggtgctgcaggacaaacggagcgaacatgtcagcttctgtcgctacgccgccagactg
acggagcgagtgtctggcaagcccctcatcatgggcgcggaggtctcgctgtctcgccta
cagaaagccaacgttgtcgctcagactcgcatcacgttttctgagaaggaattgctcatt
ttgattaggaaccaccttgttgctaaaggactacacgacacagcaaataccctggttaaa
gaggcaaacctacctgcagcatctctctttccaaactccgcctcctcaggtgtcacccct
acatcctccacttccaaatctaggacttgtcggtttgctggtggtgtcgcagctcgtatt
gctgccaatattgggccctctcccttatcctcaggtaattcagcccccactacaccctcc
actgctcgttcttctgccattcctcactcgtcaggttcattggtgtctacctcagcggct
cccaatactcctcctcatgctgggcaaagctcgcatcttgttgggcgaattttattctct
cgggaacgaccagtggccagctgcagctcagggaaaaaactgcgtgcacttagacagaag
tctgaccatggtgctttcatacagaccccagctatgaaaaagcagctggagcgccacttg
ccttctccgccgacccttgacagcatcatcacagagtacctgagagaacaacacgcccgc
tgttcgaatcccgtcaccacctgtccacctttttcccttttcaaccctcaccgctgccca
gagtccaaacagaggcgacaggcgtcacccaatttcaccgcccgtctggggagcaggatg
ctatgtccaaagtaccggggtgtggacagaggaagtctggatagacagctaatattcagc
aggtttcgccccgtgtcagttttccgtgaaaacaatggaggcgatagcagtttcacctgt
tgtgccttttcggcccgcgagcgcttcctgatgctgggaacgtgctccggtcacctcaag
ctttacaacatcttctccggagaggaggcggccgactacacctgccacggatcggccatc
tctcacatcgagccttcccgggatggtaactttgttcttacttctgcttcgtggagcgtc
cctctgtcagctctctggagtatggacagtgtttttaccatgaagaactcctttggagaa
gatcattacgttgagttcagcaaactctgtcaggacagagtaattggcactaaggaccag
gttgcacatatctacgacatacagacaggtcaggaggtcctgaccctgaacgaccccgca
ttggccaacaattacaagaggaactgtgccaccttcaaccccactgatgacctggtgtta
aatgatggggtgctgtgggatgtgcgagcgtcacgggccatccacaagttcgacaagttc
aacatgaacctcagtggggttttccatccaaatggcttggaggtcatcataaacactgag
atttgggacctgaggaccttccacctgctgcacactgctcctgctctggatcagtgccgt
gtggtctttaacagcaatggcaccatcatgtatggagcgatgctgcaagctgatgatgac
catgacgtcatggatcagcaggtgacgagtcccttcggctcatctttcagaacatttgat
gccacggactacaagcctattgccacactggatgtgaagaggaacatctttgatctgtgc
actgataccaaagaccactacctggctgtcatagagaaccaggatgcggtgaccatagat
actgtatgtcgcctttatgaagttggacgacagaaattagcagaagaaggagatgatgat
gatcaagatgaagatcagaataatgattcctcagacacagatgatgatgacgatgatgac
gatgatgatgacatggatatagagcccctcattgaagaacttgcaaatgacgaacaggag
gaccaggagcaagctaacttgcctgtagatgatgcgattgaggctcttcttggtaatact
agtggtgatgatggtgatgatgacgatactgatcatgactctgaaactttagaccatgga
ggatcatggtttggagaagaatcagatgatgacgaccctgacatgtttggatccttacct
gacttatggttttaa
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integrated database retrieval system
