Xiphophorus couchianus (Monterrey platyfish): 114135733
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Entry
114135733 CDS
T05908
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114135733 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114135733 (irf6)
Transcription factors [BR:
xco03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
114135733 (irf6)
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114135733 (irf6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
114135733
NCBI-ProteinID:
XP_027859074
UniProt:
A0A3B5L1D0
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Position
20:complement(16898030..16906157)
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AA seq
490 aa
AA seq
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MAVTPRRVRLKPWLVAQVDSARYPGLVWVDREVMRFRIPWKHATRHTPQHEDEDTIFKAW
AVETGKFQEGVDEPDPAKWKAQLRCALNKSREFKLVYDGTKEVPMNPLKVYDVCDIPQPN
SNQTPSDAGSHTPYDEDFGEDPDTPESLPPYPSNGTSPSPLLLWSPMGSDSSMQPSSCPP
SNEVWPKEEPGKIWPKEEPADVEMPPSNLDELPPAPLPDPILQPSPLSDIFLASPEMWIS
SLPMTDLEVQFLYRGKEVSPTVTVSNPQGCRLFYGDLGPMVNQEELFGPVNLAQLRFPTT
EHITNDKQRIFTSRLLDVMDRGLILEIRGHDIYAIRLCQCKVYWSGPCAPNPAAPNLIER
QKKVKLFCLESFLSGVVAQQRGQATSPPQFEISLCFGEEWPDGRPKERKLIMVQVIPVVA
RMISEMFSGDNNLSFDSSSVRLQISIPDIKDNIVSHLKELYSLLQNHQGQEGWALPPNSG
LNIAQALQTQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcacccctcggcgcgtccgcctcaagccgtggctggtggcccaggtggacagc
gctcggtacccgggtctggtttgggtcgaccgggaagtcatgcgcttcaggatcccctgg
aaacacgccacgagacacacacctcaacacgaggacgaggacaccatatttaaggcgtgg
gctgtggagaccgggaagtttcaggagggagttgatgaacctgatcccgccaagtggaaa
gcccagcttcggtgcgccctgaacaaaagccgggaattcaaactcgtctatgacggcacc
aaggaagtccccatgaatcccttaaaggtatacgatgtctgcgacatcccacaacccaac
agtaaccaaactccttcagatgcaggatcacatactccctatgatgaggattttggagag
gatcccgacacgccagagtctcttcctccatatccatccaatggcaccagtccttctcca
ctccttttgtggtctccaatgggttccgattcttccatgcagccttccagctgtccacct
tcgaacgaggtctggcccaaagaggaacctggtaaaatctggcccaaagaggagcccgca
gatgtagagatgcccccctcaaacctggatgaactgcccccggcccctctgcccgacccc
atcctgcagccctctcctctttctgatatcttcttggcctctccggaaatgtggatcagc
tccctcccaatgacagacttggaggtccagttcctgtacagagggaaggaggtgtctcct
accgtgactgtgagtaacccgcagggttgcaggctgttctacggggacctggggcccatg
gtcaaccaggaggagctgtttggacccgtgaacctggcacagctgcgcttcccgaccaca
gagcacatcaccaacgacaagcagaggatcttcaccagtcggctgctggatgtgatggac
cgaggtctgatcctggagatcaggggccacgatatctacgcaatccgcctctgccagtgt
aaggtgtactggtcgggcccctgtgctccaaacccagctgcgccaaatctgatagagcgg
cagaagaaggtcaagctcttttgtctggagtcgtttctcagtggtgttgtagcgcagcag
cgtggccaggcgaccagccctccacagtttgaaatcagcctctgctttggagaggaatgg
cccgatggaagacccaaagagcgaaaactcatcatggtccaggtcattcctgtggtggct
cggatgataagcgagatgttttccggagacaacaacctttcatttgacagcagcagcgtg
cgcctgcagatttcaatcccagatataaaagacaatatagtgagccacctaaaggagctg
tacagcctgctgcagaaccaccagggccaggaggggtgggctctgccccccaactcaggc
ctgaacattgcccaggctctgcagactcagtga
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