Xiphophorus couchianus (Monterrey platyfish): 114135751
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Entry
114135751 CDS
T05908
Name
(RefSeq) integrin alpha-5-like
KO
K06484
integrin alpha 5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03266
Virion - Herpesvirus
xco04145
Phagocytosis
xco04510
Focal adhesion
xco04512
ECM-receptor interaction
xco04517
IgSF CAM signaling
xco04518
Integrin signaling
xco04810
Regulation of actin cytoskeleton
xco04820
Cytoskeleton in muscle cells
xco05100
Bacterial invasion of epithelial cells
xco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
114135751
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114135751
04517 IgSF CAM signaling
114135751
04518 Integrin signaling
114135751
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
114135751
09144 Cellular community - eukaryotes
04510 Focal adhesion
114135751
09142 Cell motility
04820 Cytoskeleton in muscle cells
114135751
04810 Regulation of actin cytoskeleton
114135751
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
114135751
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
114135751
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114135751
04515 Cell adhesion molecules [BR:
xco04515
]
114135751
04090 CD molecules [BR:
xco04090
]
114135751
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114135751
Cell adhesion molecules [BR:
xco04515
]
Integrins
Integrin alpha subunits
114135751
CD molecules [BR:
xco04090
]
Proteins
114135751
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
114135751
NCBI-ProteinID:
XP_027859101
LinkDB
All DBs
Position
20:289432..341726
Genome browser
AA seq
1055 aa
AA seq
DB search
MGALPGLSPSYRPRGDRRRRAALLLPVVAAALQLCVAFNLDAEGRSVFTGKRGSYFGYSV
EFFGNSSSISVLIGAPKANTSQPNVTEGGAVYRCSWSQNNCSVINFDQQGDRHFYINGVN
TQVEFKSHQWFGAIVRSHGNSILACAPRYYWRTEHDTPFSDITGTCYLSVDALKTFVEFA
PCRTERHGPAGQGYCQGGFSADFTKDGRVVLGGPGSFYWQGQLISATAEEIVKAYYPSYF
LLSVAGQIQTRQVQGSYDDSYLGYSVTSGEFSGDAEEDFIAGVPKGLMLYGLVSILSGKD
LKSVLNLTGEQMGSYFGYAVAATDINNDGLDDLVVGAPTFMHPGFNGRLEELGKVYVYLQ
RGPLRLEPAQTHLLGSQVFGRFGTSLAPLGDLNQDGFNDVAVGCPYGGDQQQGVVFIHNG
HAGGLKDTPTQVLSGQWASSSFPASFGFALRGDMDIDQNGYPDLIVGAFGLDKAVLYRAR
PIVRAGASLTVQPAMFSPEEKTCSLITEERNVSVSCVSTRFCLEAYGKHLPSHLGFLVEV
QLDRAKQNQKESVRRALFLESQQPTLLRTLNLTNGQRFCHEIKIYLRAEDEFRDKLSPID
ISLNFSLDGRVAADQHGLSPILDYQTEQRVEQKAQIQLDCGEDNICVPDLKLAVIGDKSE
VYLGDENALSLIFNARNEGEGGAYEAELYVVLPPEADYSGIARNNGSLTQLTCSYEADNQ
TRRLVCDLGNPMKSGSSLWAGLRFTVPRLTDANDVVQFQLQIRSKNFNNSDSNEVLLEVQ
VAAKAEVILQGVSRPDKVIFPPPSWSARQSLGAEQDVGPELQQVYELVNNGPSVVSRTTL
EVRCPLRNQGHALLYPVEVITVGPLSCSSKTTFNALKLKLQAPVSESPALLKSSTEHYVW
RREENRDPLAEHGNLTCSSVECWKLHCDVNRLEKGSSVILTVRSRLWAETFMERPYKQHI
LECSVRYEVNKMPYAIPPKFKSSGSKKVLASVMWSKPDNQFSVPVWIIILAVLAGLLLLA
VLIYLLYKMGFFKRSDPYGTTMEKAHLKPQASSEA
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcccttcctggactctcaccttcgtaccggccgcggggagaccgccgccgccgc
gccgcgctgctgctacctgtagtggcggccgcgcttcagctttgtgtcgcttttaacctg
gacgcggagggacgctccgttttcacgggaaagcgggggagttatttcggatattccgtg
gaattcttcgggaactcatccagtatcagtgtccttattggagctccaaaagccaacacc
agtcagccgaacgtcaccgagggaggagctgtgtaccgttgttcctggagccagaacaac
tgcagcgttatcaactttgaccagcaaggtgaccgccatttttacataaatggtgtgaac
actcaagttgagttcaagtcccatcagtggtttggcgctattgtgcgttcccatggtaac
agcatcttggcctgtgctcccaggtattactggaggacagaacacgacacgccgttctct
gacatcacaggaacctgctacctctctgttgacgctctcaaaacctttgtggagttcgcc
ccgtgcagaacagaaagacacggccctgctggacagggttactgtcagggaggattcagt
gctgactttaccaaggatggaagggttgttcttggagggcctggcagcttttactggcaa
ggtcagctgatttcagccactgcagaggagatcgttaaggcctactacccgtcctacttc
ctgctgtcggtcgctggacagattcagacccggcaggtccaggggagctacgacgacagc
tacctgggttactctgtgaccagcggcgagttcagtggggacgctgaggaagatttcatc
gcaggagttccgaaaggactcatgctgtatggtttagtgtccattttaagtgggaaggac
ctgaagtctgtgctgaacctgacgggtgaacagatggggtcttacttcggctacgcagtg
gcggctactgacatcaacaacgacggattggatgatctggttgttggagcgccgacattc
atgcacccggggttcaacgggcgtctggaggagctggggaaagtgtacgtttacctccag
aggggcccgctgcgtctggagccggctcagacccatctgctgggctcacaggtcttcggt
cggtttggcacctctctggctcctctgggtgacctcaaccaggatggcttcaacgacgtg
gccgtcggctgtccgtacggcggagaccagcagcagggcgtggtcttcatccataacggt
cacgcaggaggtctgaaggacacgcccactcaggttctttctggccaatgggcttccagc
tctttccctgccagcttcggctttgctctgcgaggcgacatggacatcgatcagaacggc
tacccagatctgattgttggtgctttcggccttgataaggccgtcctgtacagagcgcgg
ccgatagtgagagccggtgcttctctcaccgtgcagccggccatgttcagcccggaggag
aagacctgttcgctcatcacagaagagagaaacgtctccgtttcctgtgtgagcaccagg
ttctgtctggaggcctatgggaagcacctcccctctcatttaggcttcctggtggaagtg
cagctagacagagcaaagcagaaccagaaggagtctgtgaggagggcgctgttcctggag
agccagcagcccaccctgctgaggaccctaaacctcacaaatggtcaaaggttctgccat
gaaatcaaaatctacctgcgggccgaggacgagtttcgggataaactctctcccatcgac
atcagcctgaacttcagtctggatggtcgggtggcggcggatcaacacggcctcagtccc
atcctcgactaccagacagagcaacgtgtggagcagaaggcccagattcagctggactgc
ggagaggacaacatttgtgtccctgacctcaaactggctgttattggtgacaaatcagag
gtctacctgggcgacgaaaatgccttgagcttgatctttaatgccaggaacgagggagag
ggaggggcttatgaggcggagctgtacgtggtgctgcctccagaggccgactacagtggg
atcgcacgcaacaacgggagtctgactcagctgacctgcagctacgaggccgataaccag
acccgccgtcttgtgtgcgatctgggaaaccccatgaaatctggcagcagcttatgggcc
ggccttcgattcactgtgccgagactgacagacgctaacgatgttgtccagtttcagctc
caaatacgaagtaaaaacttcaataactctgacagtaacgaggttctgctggaggtgcag
gttgctgccaaggctgaggtgatcctgcagggtgtttctcggccagacaaagtcatcttc
cctcctcccagctggagcgcccgtcagagcctgggggcggagcaggacgttggccccgag
ctgcagcaggtttatgagttggtgaacaacggccccagtgtagtgagccgcacgacgtta
gaggtgaggtgtcccctgaggaaccagggccacgctctgctctatcctgtggaggtgatc
actgtgggcccactcagctgctcctccaaaacaaccttcaatgcactgaaactcaagctt
caggctccagtgtcagaaagtcctgcattgttaaagtccagcactgagcattacgtctgg
aggagggaggagaacagggatcctctggctgaacacggaaacctgacgtgcagctcagtg
gaatgctggaagctgcactgtgatgtgaaccgactggagaaaggcagcagcgtcatcctg
actgtacgctccagactctgggctgagaccttcatggagcgcccatacaagcagcacatc
ctggagtgttcagtccggtatgaagtgaacaagatgccgtacgccattcctcccaaattc
aagtcatccgggtcaaagaaggtgctggcgtctgtgatgtggagcaagccagacaatcag
ttctcagttccagtgtggatcatcatcctggctgttttagctgggctgctgctgctggcg
gtgctcatatatctgctgtacaagatgggcttcttcaaaaggtcagacccctacggaaca
accatggagaaggcccacctcaaaccccaggcgtcctctgaagcttag
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integrated database retrieval system
