Xiphophorus couchianus (Monterrey platyfish): 114135755
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Entry
114135755 CDS
T05908
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114135755 (chd5)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114135755 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
114135755
NCBI-ProteinID:
XP_027859106
LinkDB
All DBs
Position
20:complement(7984488..8029625)
Genome browser
AA seq
2001 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDMPDEDDETERNTVPLTALASFFSDDDSLKKQKKKKPKKIK
EGKIPKVKKRKKEGGIQPRLDSDLEEISEVEEERERPEIGSESESSAYGPTKKKKKKPRE
KKERKPRKKKRDEDDDDDDDDDGNMKEPKSSGQLMQEWGLEDVQYGFTEDDYKTITNYKA
FSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETVTVA
QPTSVSISQLSSQQGTLKKAKTKEGKGPGVRKKSKTLKEVKKKPKPKKTKSKTGQSGKKK
KASSSEEDFLEESDFDDISIHSASVLSDTSGATKKKARRGRRKRKKEDGDGYETDHQDYC
EVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDEEEEEEEP
AGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKG
KVQKILHWMWGEPPLPAEPPAGPDGKPIDPLTKPPLKGRPEREFFVKWAGLSYWHCSWVS
ELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNNEKRKSKDPQYAAMEERFYRYGI
KPEWMIIHRILNHSFDKDGDVHYLIKWRDLPYDQCTWEADDFDVPEYEIHKAFYWDHREQ
ILGEDQRPLVVRKGKKLKENYPKREVPPDAPIIDPTIKFEHQPWYINATGGTLHPYQLEG
LNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWERE
FEMWAPDFYVVTYTGDKDSRAIIRENEFTLEDSAIKSGRKVFRMKKDSPIKFHVLLTSYE
LITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELF
HLLNFLTPDRFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELI
VRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAP
VLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEFEGYKY
ERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDWNPHND
IQAFSRAHRIGQNKKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQ
ELDDILKFGTEELFKDEMEAARTMGDNKDGEEGNVIHYDDDAISKLLDRSQDATEDTEIQ
NMNEYLSSFKVAQYVVKEEDEEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNL
GKGKRIRKQVNYNDATQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLK
NEKDKPLPPLLARVGGSIEVLGFNTRQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSE
REFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVN
GKLSSPDLIPIGMELKKLTESVSSDPNTPVPASPVATQPSTPVPPEKAESLVRNAEDKET
TETDGKKLSEQEQAPIAELASAPEKAADSDETKATSEEKTGDERNRTKSPMTKAEPPAYP
KESAFKPAELPSSHTSPKTDPCKEAEKSSEKGEAGSPREKTEDKENKPDDVKSEDALEGR
LNGDKDTLDELDESRREDKNGFKAKFMFNIADGGFTELHTLWQTEERAALSSGKMHDIWH
RRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRFKLLE
QALVIEEQLRRAAYLNMTQDPSHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVL
HKVLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGSEPPPQQPFS
QGGFGCSQMYSSGFGGGFRGPGGQPMVNYSQMPLGPYVSVSSNGPPPPTSHLDKKSLDSF
RDGATPELKSGKASDVICIED
NT seq
6006 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagtaatgaagacgagggacaggacgacatggattttgaagacgat
atgccagatgaagatgacgaaactgagcgcaacaccgttcccctcacggcccttgcgagc
ttcttctctgatgatgactccctcaaaaagcagaagaagaaaaagcccaaaaagataaaa
gaggggaaaatacccaaagttaagaagaggaaaaaagagggaggaatacagccaagactt
gacagtgacctcgaggagatttcagaggtagaggaggaacgtgaacggccagaaattggc
tctgagagcgaaagcagtgcatatggccccaccaaaaaaaagaagaaaaaacccagggag
aaaaaagaaaggaagcccaggaagaagaagagagatgaggatgacgatgatgatgacgac
gatgatggtaacatgaaagaacccaaatcctccggccagctgatgcaagaatggggtctt
gaggatgttcagtatgggttcacggaggacgactacaaaacaatcaccaattacaaggct
ttcagccagttcctcaggcccctcattgccaagaagaatccgaagattcccatgtcaaag
atgatgacagtgttgggagccaagtggcgtgagttcagtgccaacaacccgttcaaaggg
gcatctgccaccgctgtggccgctgcggtggccgctgcggtggaaacggttactgtagct
cagccaacatctgtcagcatcagccagctgagctctcagcagggcacattaaaaaaagcc
aaaaccaaagaaggaaaagggccaggagttagaaagaaaagcaagaccttaaaagaagtg
aagaagaaaccgaagccgaagaagaccaaatcaaaaactggtcaaagtgggaagaagaag
aaagcatcctctagtgaggaggactttctggaggagtcagactttgatgacatcagtatc
cacagtgcctctgtgctttctgatacctctggggccacaaagaaaaaggcccgacgtggg
cggagaaaaaggaaaaaggaggacggcgatggctatgagactgaccaccaggactactgt
gaggtttgccagcagggaggagaaattatcctctgtgacacttgtccaagagcctaccac
cttgtctgtctggaccccgagctggaaaaggcacctgagggaaaatggagctgcccacac
tgtgagaaggagggaatacaatgggaggccaaagatgaagaagaggaggaggaggagcca
gcaggtgaggaagaggatgaccatatggagttctgcagagtttgcaaggatggaggggaa
cttctttgttgtgacacctgtccatcatcctaccacatccattgcctcaatccacctcta
cctgagatcccaaacggggagtggttgtgtcctcgctgcatgtgtcctcctctcaaaggt
aaagtgcagaagattctccactggatgtggggagaaccgccgctgccagctgagccaccc
gcaggccctgatggcaagccaattgatccactaaccaagcccccgctcaaggggcgccca
gagagggaattttttgtaaagtgggctggcctttcatactggcactgttcctgggtcagc
gaactgcagttagagctgtaccacacagtcatgtatcggaactaccagcggaagaacgac
atggacgagcccccgccatacgattacggctcaggagaggaggagctcaacaatgagaag
aggaagagcaaagacccccagtacgctgcaatggaggagcgcttttaccgctacggcatt
aaaccagagtggatgatcatccaccggatactcaaccacagttttgataaagatggtgat
gtgcattacctaatcaagtggagagacttaccctatgatcaatgcacttgggaggcagat
gattttgacgtcccagagtatgagatccacaaagctttttactgggaccacagagagcaa
attttaggagaggaccaacgccctcttgtggtaagaaaagggaagaaactaaaagagaac
tacccaaaaagggaagtccctcctgatgcccccatcatagatccaaccatcaaatttgag
caccagccctggtatattaatgccacagggggaacgctgcacccataccagctggaaggt
ctgaattggttaagattttcctgggctcagggcacagataccatcctggcagatgaaatg
ggcctcggaaaaacggttcagacaatagtctttctctactcactgtataaggagggccat
tccaaggggcctttcttggtgagtgcacctctgtctactatcatcaattgggagagagaa
tttgagatgtgggctccagatttctatgtggtgacttacaccggagacaaagacagcagg
gcaattatcagagagaatgaattcaccttggaagacagcgcaataaaatctggacgcaag
gtcttccggatgaagaaagactctcctatcaagtttcatgtgctgctgacatcttacgag
ctgatcactatagatcaagccattcttggctccatcacctgggcctgcctggttgtagat
gaggctcacagactgaagaacaaccaatcaaagtttttcaggattcttaatgggtataag
atctactacaagctgctgctcactggtactcctctgcagaacaacctggaggagcttttc
catctacttaacttcctcaccccagaccgcttcaacaacctggaaggcttccttgaggag
tttgcagatatctctaaagaggaccagatcaagaagctccatgacctccttggacctcac
atgctccggcggctgaaagctgacgtcttcaagaacatgccggcgaagacagagctcatt
gtcagagtggagctcagtcccatgcagaaaaaatattacaagtttattttgacgcgaaat
tttgaggctctgaactccaaagggggaggaaaccaggtgtccctgctcaacattatgatg
gacctgaagaagtgctgtaaccacccctacctgttccctgttgcagctgtggaggctcct
gttttgcctaatggttcttatgatggcaacctgctggtgaagtcttcaggaaaactaacc
ctgcttcaaaaaatgctgaagaaactcaaagatgaaggacacagagttcttattttctct
cagatgacaaagatgttggatctgcttgaggatttcctggagtttgaaggctataaatat
gaacgtattgatgggggaattactggaggcttacggcaggaagcaattgatcgtttcaat
gctccaggggcacagcaattctgctttttgctttcaacgcgagccggaggtctcggcatc
aatttggctagtgcagacaccgtcatcatctatgactctgactggaatccacacaatgac
atccaagcttttagcagagcccaccgaattggccaaaacaagaaggtgatgatttatcgt
tttgtgactcggggatctgtggaggagagaatcactcaggtggcaaagagaaaaatgatg
ttgactcacctggtggtgaggcccggcctgggctccaaaactggttccatgtccaagcaa
gaactggacgacatcctcaagtttggaactgaggagctttttaaggatgagatggaagca
gcacgaaccatgggagataacaaagatggtgaggagggcaacgtcattcactacgatgac
gatgccatttcaaagctactggaccgcagccaagatgccaccgaggacacagagatacag
aacatgaacgagtacctgagctcgttcaaggtggcgcagtatgtggtgaaagaagaagat
gaagaggaggaggtagagcgagaaatcatcaagcaagaggagaatgtggacccagattac
tgggaaaagctcctccgccatcattatgagcagcagcaggaggacctggcccgaaatctg
ggaaaaggcaaacgcattcggaagcaggtcaactacaacgacgcgactcaggaggaccaa
gaatggcaggatgatctttcagacaatcaatcggagtattccgtggggtccgaagatgag
gacgaagattttgaagagaggcccgaaggtggacgcaggcagtctcgtcgacaacttaag
aatgagaaagacaaacctctaccccccttactggcacgtgttggaggcagtatagaggtc
cttgggttcaacactcgccagaggaaagctttcctcaatgccatcatgcgctggggcatg
cctcctcaggatgctttcaactcgcactggctggtccgggaccttagagggaagagcgag
cgcgagtttagggcctatgtgtctctgtttatgagacatttatgtgagccaggtgcagac
ggagcagagacctttgcggatggagtcccccgtgagggcctgtctcgacagcatgttctc
accaggatcggagtcatgtcgcttgtcaggaaaaaggtgcaggagtttgaacatgtaaat
gggaagctgagctctccagatctgattcccattggaatggagctgaagaaactgactgaa
agtgtgtcttcagatcccaacaccccagtgccagccagccctgttgctacacagcccagc
acccccgtcccaccagagaaagctgagtctttggtacgaaatgctgaagataaggagact
acagagacagatggaaagaaactatctgagcaggaacaagctcccattgcagagctagca
tctgcacctgagaaggctgctgacagtgatgagacgaaggcaacctcagaagagaaaaca
ggagatgagaggaacagaaccaaatcccccatgacaaaggccgagccacctgcctaccca
aaagagtctgctttcaagccggcagagctgccatctagtcatacctcacctaagacggac
ccctgcaaagaagccgagaagtcctctgaaaaaggagaggctggttctcctcgggaaaaa
actgaagacaaagaaaataagccagatgatgtgaagagtgaagatgcattagagggtcga
ttgaacggagacaaagacactcttgatgagctggatgagagcagaagagaggacaaaaat
ggattcaaagccaagttcatgtttaatatcgcagatggaggttttacggagttgcacacc
ctgtggcaaaccgaggagcgagcggctctttcgtctggaaaaatgcatgacatctggcat
cgtcgccatgactactggctgcttgctggcatcgtaacacatggctatgctcgctggcaa
gacattcagaatgatccccgatatgctattctgaatgagccattcaaaacagagatgcac
aaggggaactacttggagatgaagaacaagttcctggcgcggcgctttaagttgttggaa
caggcattggtgattgaggagcagttgcgacgggcagcttacctcaacatgacccaggac
cccagtcaccctgccatggctctcaatacgcgctttgctgaggtggaatgtttggccgag
tcccaccaacacctctccaaagagtctctggctgggaacaagcctgccaatgctgtgctt
cacaaagtgctgaaccagctagaggaacttctgagtgacatgaaagcagatgtgacacga
cttcccaacatgctgtccagaatcccaccagtgtcggctcgtttgcaaatgtcggaaagg
agcatcctgagccgcctcaccagcagaggcagcgaacctccaccacagcagccttttagc
cagggaggctttggctgctctcagatgtacagcagcggttttggtgggggattcagagga
ccaggcggacagcctatggtcaactacagccagatgccccttggaccttacgtcagcgtg
tcatccaatggccccccgcctcctacaagccatttggacaagaaatcacttgactcgttc
agagacggggccacgcctgaactcaagtcaggcaaagccagtgatgtcatctgtattgag
gactag
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integrated database retrieval system
