Xiphophorus couchianus (Monterrey platyfish): 114135771
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Entry
114135771 CDS
T05908
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2-like
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04260
Cardiac muscle contraction
xco04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114135771
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
114135771
04261 Adrenergic signaling in cardiomyocytes
114135771
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114135771
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
114135771
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
VWA_CoxE
MCP-like_PDC_1
dCache_2
Motif
Other DBs
NCBI-GeneID:
114135771
NCBI-ProteinID:
XP_027859134
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Position
20:complement(15497321..15536360)
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AA seq
1141 aa
AA seq
DB search
MPHTSFPSDTPRSQSGELHPRTQSHLARILFYCIFFNVKMAIGKKSRSIVCFVSVQVLLI
FSASWPGAEGLTFPQQYTIMHWARRIQQEIDRAFQHITGVQQLKGIYNEERRHFKLAKNE
PRRIVEKVALDIEKLLAKKRKALDRLASEAERLQREHLWQDGLKELDMAYYDSKADLEYY
SMDGEAEVENPSQLKLEFVYDPNFKNNVNFSHTAVQIPTDIYKGAPDILNELNWTQALER
VFMENSREDPSLLWQAFGSATGVTRYYPASPWKAPDKIDLYDVRRRPWYIQGASSPKDMV
ILVDVSGSVSGLTLKLIKASVMEMLDTLSDDDYVNVARFNEKAEAVVPCFKHLVQANVRN
KKIFKEAVQQMQAKGTTDYKSGFHFAFNQLLNKTNVPRANCNKIIMLFTDGGEDRAQDVF
LQYNWPNKTVRVFTFSVGQHNYDVTPLQWIACTNKGYYFEIRSICAIRINTQEYLDVLGR
PMVLAGGVAKQVQWTNVYQDALGLGLVVTGTLPVFNLTMNGNSQNQLILGVMGVDVHLDE
IKRLTPRYNLGANGYIFAIDPNGYLLLHPNLQPKPVNLPEPVTLDFLDAEVEDSNKEEIR
RQMIDGKPGEMQIKTLINSVDDQYIDEAYRRYTWTPINDTDYSLGLVLPPYSENFIQADL
SDVMVQLQYMQSLLPSSFESSGHVFLAPREYCKNLQLSDNNTQFLQNFLSLMLDISPESD
ECDQGLIHNLILDSRIIGQLASRVWKKQDLNAYGFLAVFGSTHGGITRVFPNIAAELWDE
DPEPFNSDYYRRSLDNKGYMFRPSLRPSDDDPYGAENGTTGILVSSAVEVDLGGKLLKPS
VIGVKLDLEAWVDKFKILASNVSDNRQGSHKCGPSRSCEMDCEVNTDDLQCYLIDDGGFL
VMSNQRDHWKQIGLFFGDVDPFLMYALYNNSIFARRQSFQYQSACEMVSRSHTGAAPRGI
YVPSIGDVLSLAWWTSTLAWSVIQQLLYGLVYSSWLHQDDIFIDAFETKQSSCVTIQSQF
YFTNTTNSYNVLQDCGNCSRLFHSKRIENTNLLFVVAETLPCSSCEIEKLSQIKREFQEE
NPCELLSNARYRRGPTPCFDYSALENTSECGRGSSFQASIGTLLFIQLILPLFHLSYIQT
L
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgccccacacctccttcccttccgacacccccaggagtcagtcaggagagcttcatccg
cgcacccaaagccatttggcgagaattttattttattgtattttttttaatgttaaaatg
gcgataggaaaaaaatctcgcagcatcgtctgctttgtatcagtccaagtcctcctgatt
ttcagcgcgtcgtggcctggagcagagggtcttacattcccacagcaatacacgataatg
cactgggccaggcggatccagcaggagattgacagagcctttcagcacatcactggagtt
cagcagctgaaagggatatacaatgaagaaaggcgacacttcaagctggcgaagaatgag
ccgcgcaggattgtggaaaaggtggctttggatatagaaaaactcctggcaaagaagcgt
aaagcacttgatcgcttagcgagtgaagcagagcggctccaacgggaacatctatggcaa
gacggacttaaggagcttgacatggcctactatgactccaaagctgatttggaatattac
tccatggatggagaggcagaggtggaaaacccctcccaactcaagctggagtttgtgtac
gatccaaacttcaaaaataatgtcaacttctcacacactgcagttcagatcccgacagat
atttacaaaggagctccagacatcctgaatgagctgaactggacgcaggcgctggagaga
gtgtttatggagaacagcagggaggatccgtcgctgctgtggcaggcgtttgggagcgcg
acaggagtcactcgctactatccagcatctccgtggaaagcgcctgacaaaatcgacctg
tacgatgtccggaggaggccttggtacatccaaggggcttcatctcccaaagacatggtc
atccttgttgatgtgagcggcagcgtcagcggactcacgctcaagctgatcaaggcgtct
gtcatggaaatgctggacactttatctgacgacgactacgtcaacgtggccagattcaat
gagaaggctgaggcagtggtcccttgcttcaagcatctagtccaggctaacgtgcgaaac
aaaaagattttcaaggaggccgtgcagcaaatgcaagctaaaggcaccactgactacaag
tctgggtttcattttgcctttaaccagcttcttaacaagacaaatgtcccgcgggctaac
tgcaataaaataattatgctgtttactgatggaggggaggatagggctcaggatgtcttc
ctacaatataactggcccaacaaaacggtccgtgtgtttaccttttccgtgggtcaacat
aactacgacgtgacgcctttacagtggattgcttgtactaataaaggttactattttgag
atccgttccatctgtgccatacggattaatacccaggagtacctggacgtgctggggcgc
cctatggttctggcaggcggcgtggccaagcaggttcagtggaccaatgtgtatcaggac
gctctgggtctcggcctggtagtgacggggactctgcctgtgttcaatcttactatgaat
ggaaactcacagaatcagttaatattaggcgtcatgggagtggatgtacatttagatgag
ataaagcgactcacaccacgctataaccttggagccaacggatacatatttgccatcgat
ccaaatggatatctgctcctccatcctaatctccagccgaagcctgtgaacctccccgaa
cccgtgaccttggacttcctggatgcagaagtagaggacagtaataaggaggagattcga
cgacagatgattgatggaaaaccaggggaaatgcagataaaaactctcattaattctgtt
gatgatcaatacatcgatgaggcatacagacgttacacctggactccaatcaatgacact
gattacagtcttggtctggtattacctccctacagtgagaacttcatccaggcagacctg
agcgatgtgatggtgcagctccagtatatgcagtcattgttgccgagctcctttgagtcc
tcggggcatgtttttctggctcccagagaatactgcaagaacctgcagctttctgataac
aacacacagttcctgcagaactttctctctctcatgctggatatctccccagagtccgat
gaatgtgaccaaggtctcatccacaatcttatcctggattccaggattattggtcagctt
gcgtctcgtgtttggaagaaacaggatctgaatgcatacggcttccttgctgtttttgga
tccactcatggaggaataacacgagtttttcccaacatagctgctgagttgtgggacgag
gatccagaaccgtttaattcggattactacagaagaagcctggacaacaaaggctacatg
ttcagaccttctctgagaccctcagatgatgacccttatggggctgaaaacggcaccaca
ggaatcctggttagttcagctgtcgaggtcgatttaggaggaaaactgctcaagccttca
gtgattggagtgaagctagacctggaggcgtgggtggacaagtttaaaatcctggccagc
aacgtgtcagataaccgacaggggtcacacaagtgtggaccatccagaagctgtgagatg
gactgtgaagtaaacacagatgacttgcagtgctatctcatcgatgatggcggcttcctc
gtcatgtccaatcagagagatcactggaaacagattggcctcttcttcggtgatgtggac
ccattcctgatgtatgcgctctacaacaactccatcttcgctcgtcgacagtccttccag
taccagtctgcgtgcgaaatggtcagcagaagccatactggagcagcgccgagaggcatc
tatgtgccatccataggtgatgtcttgagcttggcgtggtggacgtccacactggcatgg
tctgtgattcagcagcttctctatggacttgtttacagcagctggctccaccaagatgac
atctttattgatgcctttgagacaaaacaaagcagttgtgtgaccatccaaagccagttc
tacttcacaaacaccaccaactcctacaacgtcctgcaggactgtggaaactgctcacgg
ctgttccactcaaagcggattgaaaacaccaatttgctctttgtggtggctgagacattg
ccctgcagctcctgtgagattgagaaactgtcccagatcaagagggagtttcaggaggaa
aatccatgtgaactgctgagcaatgcgcgatatcgtagaggtccaactccctgctttgac
tacagtgccttagaaaacacgtcagagtgtggtcgaggttcttcatttcaggcctctata
ggaacccttctcttcattcagctcattctgcctctgtttcatctctcatacatccaaaca
ctctga
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