Xiphophorus couchianus (Monterrey platyfish): 114135831
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Entry
114135831 CDS
T05908
Name
(RefSeq) aggrecan core protein-like
KO
K06792
aggrecan 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
xco00535
]
114135831
00536 Glycosaminoglycan binding proteins [BR:
xco00536
]
114135831
04091 Lectins [BR:
xco04091
]
114135831
Proteoglycans [BR:
xco00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
114135831
Glycosaminoglycan binding proteins [BR:
xco00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
114135831
Lectins [BR:
xco04091
]
C-Type lectins
Lecticans
114135831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
UL45
I-set
Ig_3
ig
Motif
Other DBs
NCBI-GeneID:
114135831
NCBI-ProteinID:
XP_027859246
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All DBs
Position
2:complement(27533500..27553420)
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AA seq
1249 aa
AA seq
DB search
MTTLLLLCVSLPIILATTILKDPNDIVGSLHVSIPVELPLRPLLGGKVAVPCYFRGSTVN
DPGAPTMAPLAHRIKWTYITKEKVSPILVASEGKVYVETEYLDRVTLVGYPLVPTDATIE
ITELRSKDSGTYRCEVTHGIEDSSDVVDIQVQGIVFHYRAISTRYTLTFEKAKEACVQNS
ATIATPAQLQAAYDDGYHQCDAGWLSDETVRYPIQEPREPCFGDKENFPGVRTYGVRDVN
ETYDVYCFAEKMSGKVFYSMSVDKFSFYEAQDQCVKLGARLATTGELYLAWKNGMDVCNA
GWLADKSVRYPINIPRPLCGGGLVGVRTVYLFPNQTGYPYPDSRYDAVCFQDDDEGEVPG
RTTPFPVIHFATSAVPLPTPTPSQGTEESKSGGVVTLSPFTHLSSEDVTMGPTGVVFHYR
PITGRYTLTFLEAELACQTIGAVIASPQQLYAAFEKGLHQCDAGWLRDQSVRYPIVSPRS
NCAGNLLNLPGVRSYGLRPASECYDVFCYVDGLKGEVFFTTDYDSFSYDEAVQHCQKLNS
TLATPGQLHAAWRQGLDKCRPGWLMDRSVRFPVTTPKSYCGGGEVGVRTIYAFPNQTGFP
DEHSRYDAYCFRAQIPVDPQTPITVSQTTKPKDVSETTTVTPVDGAPTNKTTVGYDETSV
NMTDVEVIKETVDTSLQVAPTATTVPPPVPVDTPGSGSADHSASGETSGEPSSTTSSGDT
SGSGQGVTYSGTPDVLSGEQSASGSLKEGKEGSTVFITSGDMGSASGAESGSESGSGSGI
IIHGSGYRSGSGDISGSGDDTVVTLVDEELVDLSKTLKNGTTTQELGQGGIDTSGGSSVS
GSGDVSASGSGGFSGILFVDSSGIDLTPQQSGEQEVSGYQPSESGYPSGFPSGFPSGVSG
SGSASGDPSPKHDKVIYLIKDDMIEVISDFTEEGRGVVEISGEGSASGRRPEFSGTSTQT
SGSGAAPTTAYVEFVPTLDQSGSWDTAEESDTGSAVHSVTPEAVYAWPTTAPSVSVVTPA
VVERPDVDRATKGCPEDWMEFGGRCYRHFDDRLTWSEAEQRCQEVSGHLVSIGSPQEQQF
VNSHGDSYQWIGLNDKDVQNEFRWTDGRPLSFENWRPNQPDNYFGSGEDCVVMIWHEGGE
WNDVPCNYHLPFTCKLAAVMCGAPPEVEHGAPMGSSTGRSPVDSIIRYQCNPGFTQRHLS
VIHCMANGEWEKPQVQCIDAGANSNRLHKRSLRRRSKGVSSQQEQRELL
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccctccttctgctgtgtgtgtctttgcccataatcttggcaacaacaatactg
aaagaccccaatgatatagttggctcattgcatgtcagcatccctgttgagttgcctctc
cgtccactgctgggaggaaaggtagctgtgccatgctacttccgagggagcactgtgaat
gacccaggagcacccaccatggccccgctagctcacagaatcaagtggacctacatcacc
aaggagaaagttagcccaatcctggtagcgtcggaggggaaggtttatgtggagacagag
tatctggacagggtgacattggtcggctacccgctggttcctactgatgctaccattgag
ataactgagctaaggtccaaagactctggtacctatcgctgcgaagtgacccatggtatt
gaggacagctctgacgttgtagacatccaggttcaaggtattgtattccactatcgtgcc
atctccacccgctacaccctaacatttgaaaaagccaaagaggcctgcgtgcagaacagt
gccaccattgcaactcccgcacaactccaagccgcttacgatgacggataccaccagtgt
gatgctgggtggctttcagatgaaactgtgaggtaccctattcaggagcctcgggaacct
tgctttggagataaggaaaactttcctggagtgaggacctatggtgttcgagatgtcaat
gaaacttatgatgtgtactgctttgctgagaagatgtcaggcaaggtcttctactccatg
tctgttgacaaatttagcttctatgaagcacaagaccagtgtgtcaaactgggagcaagg
ctggccaccactggagagctataccttgcctggaagaatggcatggatgtctgtaatgct
ggctggctggcagacaaaagtgtacgctacccaatcaacatccccaggcctctatgtgga
ggtgggcttgttggagtaagaacagtctacttattccccaaccaaactggatacccctac
ccagactctcgttacgatgcagtctgcttccaagatgatgatgaaggtgaagtgcctggt
aggaccacacccttcccagtcatccactttgcaactagcgctgtgcccctcccaacccca
acgccttcacaagggactgaagagagcaagtctggaggagtagtaactctctccccattt
acacatctgtccagtgaagatgtgaccatgggtcccacaggtgtggtgttccactaccga
cccatcactggtcgttacactctgacctttttggaggctgagctggcttgccagaccatc
ggagcggttatcgccagcccccagcagctgtacgcagcctttgagaaaggcctgcaccaa
tgtgacgctggctggctgcgcgaccaatctgtgcggtatccgattgtgtcacccagaagc
aactgtgctggtaacctgctaaacctcccaggagtgaggtcgtacggcctgagaccagcc
agcgagtgctacgatgtcttctgttacgtggacggcttaaaaggtgaggtcttcttcacc
accgactacgacagtttctcctacgacgaggccgtgcagcactgccagaagctcaacagc
accctggccacgcctgggcagctgcacgccgcctggagacaaggactcgacaaatgccgg
ccaggctggctcatggaccgcagcgtccgcttccccgtcacaacccccaaatcttactgt
gggggcggagaggtcggggtgcgcaccatctacgccttccccaaccagacgggatttcct
gatgagcactcacgctacgacgcctactgcttcagagctcaaattcctgttgatccccaa
actcccatcaccgtctctcagacgacaaagcctaaagatgtcagcgagactacaaccgtc
acaccggttgacggtgctcctactaacaaaactacagttggctacgatgaaacctctgtg
aatatgaccgacgttgaggttatcaaagaaactgttgatacttctttacaagttgctccg
acagcgacaaccgttccccctcctgtcccggtcgatacgccgggttctggttcagctgac
cactcagccagtggggagacctccggggaaccttcttccaccaccagcagcggtgacaca
tccgggtcaggacaaggcgtcacctacagcggaacacccgatgtgctttctggcgagcag
tctgcctctggaagcctcaaggaagggaaggagggcagtacggttttcatcacatctgga
gatatggggagcgcatcaggagctgaatctggatctgaatctggatccggatctggcatc
atcatacatggatcaggctacagaagtggaagtggggacatcagtggcagtggtgatgac
acagtggtcaccttggttgatgaagagctggtggatttgtcaaaaaccctcaagaatggc
acaacaacgcaggagcttggccagggagggatcgacaccagcgggggatcgagtgtttct
ggatcaggagatgtgtctgcttccggctcgggcgggttttctggcattttgtttgtcgac
agcagtgggattgacctgacaccccagcaatctggggagcaagaagtgtctggataccag
ccatctgaatcggggtaccccagtggttttcccagtggctttccatctggcgtttcaggc
agtggctctgcctccggagacccgtctccaaagcacgacaaagttatctacctgatcaag
gatgacatgattgaagtaatctcagactttactgaagaggggcgaggtgtggtggagata
agcggggaaggcagtgcatcaggacgccgccctgaattcagcggcacttcaactcaaacg
tcgggaagcggagcggctcctacgacggcttacgtagagtttgtaccgactcttgaccaa
tccggatcctgggatacagctgaggagagtgacaccgggtctgcagttcattcagtcaca
ccagaagcagtctacgcctggccaacaacggctccgtcagtgtcagtagttactccggct
gttgtggagcgtcctgatgtggatagagctacgaagggctgtcctgaggactggatggag
tttggcggcagatgttacagacactttgacgatagactcacttggtctgaggcagagcaa
cgctgtcaggaggtcagcggccacctggtcagcatcggctcgccacaggagcagcagttt
gtcaactcccatggtgacagctatcagtggattggacttaacgacaaagacgtgcagaat
gagttccgctggacagacggccgtcctctgtctttcgagaactggaggcccaaccagccg
gataactactttggttctggtgaagactgcgtggtgatgatctggcatgagggcggcgag
tggaacgacgtgccctgcaactaccaccttcctttcacctgcaagctagcagctgtcatg
tgtggagcaccccctgaggtggaacacggcgctccgatgggcagcagcacagggcgctct
cctgtcgactccatcatccgctaccagtgcaacccgggcttcacacagcgccacctgtct
gtcatacactgtatggcaaacggagagtgggaaaagccacaagtccagtgcatagacgcc
ggagccaacagtaacaggctacacaaaaggtccctgaggagaagaagtaaaggtgtcagc
agccaacaggagcagagggagctgctctga
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