Xiphophorus couchianus (Monterrey platyfish): 114135877
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Entry
114135877 CDS
T05908
Symbol
ccdc36
Name
(RefSeq) interactor of HORMAD1 protein 1
KO
K26085
interactor of HORMAD1 protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114135877 (ccdc36)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
114135877 (ccdc36)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IHO1
TolA_bind_tri
DUF1664
WXG100
Rab_bind
DUF4485
DUF445
Syntaxin
BORCS6
ApoLp-III
DUF489
DUF7605
GldM_1st
Motif
Other DBs
NCBI-GeneID:
114135877
NCBI-ProteinID:
XP_027859332
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All DBs
Position
20:15416823..15420790
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AA seq
429 aa
AA seq
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MSYLRNIKKMLNIPAGTRNVGSNGHPSLTDSQVFFGSQFWHEHSQGMSQEMSLSSRNSQQ
SSQEGSDPTILNRYTSKPLLFGDMKDKTRTSGLLDKFEEDRKKAKERSDSDHFLKESQHI
RETLINIQQLVAGTEKNTSVCQTIFENFDSFASSLKTSLESLKRDISQMFETWVDKLSSQ
KEVMAELEEKLQKNGEATSELATQLKSLKSNVECLRGEQEREQKMLEEALKLLNSLVPKP
SDKPSPKSMLDSAIQTSPEREMSAHNILKSSQSEGTQLPNVPGNLKHQGETSTQGCRRVF
GKRRLNLKGQRCKKRPLVLSQSRKQFVPDENTKPINPCKKSQKTSGPLYENHDQNILADQ
QNLGSGSLIPGKKGSRSSMAAGCFMNPPSSWSQDSNSSECLAAIEPILEMLSPVKQGDLW
ELFDSEFDF
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagttatttgaggaacatcaagaaaatgttgaacataccagctggaaccagaaatgtg
ggctccaatggacatcccagtttgacagattcccaggttttctttggctcgcagttttgg
catgaacattcccagggtatgtctcaggaaatgagtctgtcatccagaaactcccagcaa
agttcgcaggagggaagtgacccaacaattttaaacagatatacctctaaacctcttctg
tttggggacatgaaggacaaaacgagaacctcaggcttgcttgacaagtttgaagaggac
aggaaaaaagcaaaagagagaagtgacagtgaccactttttaaaagaatcccaacatatt
agagaaactctcatcaatattcagcaactggtggctggcactgagaaaaacacatctgtg
tgccaaacgatctttgaaaattttgacagttttgcatcatcactgaaaactagtttggag
agccttaagagagacatttcccagatgtttgagacttgggtagacaaattaagctctcag
aaggaagtaatggcagagctggaggaaaaactgcaaaagaatggggaagccacatcagag
cttgcaacacaactaaagagcttaaagagtaatgtggagtgtctgagaggggagcaggaa
agagaacaaaaaatgctggaggaggctctgaagctgctcaactctcttgttcctaagcct
tcagataaacccagtcctaaatcaatgttagacagcgccattcaaacatctccagagcgg
gagatgtcagcgcacaacattctgaagagcagtcaaagtgaaggcacacagcttccaaat
gtgccaggcaaccttaaacatcagggtgaaacttccacacagggctgcaggcgcgtcttc
ggaaagagaagactcaatctgaagggccaaaggtgcaaaaagagaccactggtgctctct
cagagtaggaagcagtttgtcccagatgaaaacaccaaacctataaatccttgtaagaag
tcacagaaaacatcaggacctctttatgagaaccatgatcagaacatcctggccgaccag
cagaacctcggttcaggcagcctgataccagggaagaaaggaagtagatcctccatggcc
gcaggatgtttcatgaacccgccgagctcctggtcccaggacagcaacagctcagagtgc
ctcgctgccatcgaacccatcctggagatgctcagcccagtaaaacaaggagacttatgg
gagttgtttgattctgaatttgacttttag
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