Xiphophorus couchianus (Monterrey platyfish): 114136056
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Entry
114136056 CDS
T05908
Symbol
gdf5
Name
(RefSeq) growth/differentiation factor 5
KO
K04664
growth differentiation factor 5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04060
Cytokine-cytokine receptor interaction
xco04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
114136056 (gdf5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
114136056 (gdf5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
xco04052
]
114136056 (gdf5)
Cytokines and neuropeptides [BR:
xco04052
]
Cytokines
Transforming growth factors (RSTK binding)
114136056 (gdf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
114136056
NCBI-ProteinID:
XP_027859630
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Position
20:complement(2957898..2968188)
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AA seq
524 aa
AA seq
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MNVVTRLSLLLSCWTLFYLHPVRGSLSRSGPAERTGGTHRGSAHPSGRQPVPAAGSWKPH
AGPPLITAETIPLRGKQTAGGNPEHPHPHHHRQLEQPTGALDLGRKEAARSWPPAADARV
KPHAPAHAGGGVGVGDSPGKPAGKVAARASAAAAAARGGFPPAAQRGAAARRQKLGDKQP
LVTPHDYMLSLYWSLSSGNLNSSALHEAGLANTITSFVDRGHDDRGPMLRRQKYQFNISS
LERDGLLGAELRILRKLVSVAAADGGSVPWLKLYSCASGRQKAALLQSRTVDDLLGRFSN
KWEVFDIYKVFKGFKSQQLCLELEALEHRGGRPLDLQTLGFARPGRTNKEKAFLLVFGKS
KKRDLFYNEIKARSGHDNKTVYEYLFNQRRMRRAPPPRGAKKPLRVPSQILLQHQAAKSR
PRCHRRRLHVNFKDMGWDDWIIAPLEYDAYHCDGACDFPIRSHLEPTNHAIIQTLINSME
PDTTPPTCCVPTRLSSISILYIDSANNVVYKQYEEMVVESCGCR
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgtgacacgactctctctgctgctcagctgctggactctcttctacctgcat
cctgtccgcggctccctcagccggagcggacccgcagagcgcacaggaggaacccaccgt
ggatccgctcacccctcagggaggcagccggtccccgctgcagggagctggaaaccccac
gcaggacccccgctgattacagccgagacaatcccgttgagaggaaaacagactgcggga
gggaaccctgaacatccgcatcctcaccatcatcggcagctggagcagccgaccggagcg
ctggacctggggcgcaaagaggctgcgcgctcctggcctcccgctgcggatgcacgcgtc
aaaccgcacgcccccgcacatgcgggaggaggtgtcggagttggagattcaccggggaaa
cctgcgggaaaggtcgccgccagggcgagcgcagcggcggcggcggcgcgcggcggcttt
cctccggcggcgcagcgcggagccgccgccaggaggcagaaactgggcgacaagcagccg
ctggtgaccccgcacgactacatgctgtccctgtactggtccctgagcagcgggaacctg
aacagcagcgcgctgcatgaggccggcctggccaacaccatcaccagcttcgtagacaga
ggacacgatgatcgagggcccatgctgcgacgtcagaagtaccagttcaacatcagctct
ctggagcgggatgggctcctgggggccgagctccgcatcctgaggaagctggtttctgtg
gcggcggctgatggaggctcggtgccctggttgaagctgtacagctgcgcttcaggccgg
cagaaagcggctctgctccaatccaggacggtggatgacctcctgggcagattcagcaac
aagtgggaagtgtttgacatttataaagtcttcaagggattcaagagccagcagctgtgc
ttggagctggaggctctggagcaccgaggaggccgtccgctggacctgcagactctgggc
ttcgctcgacctggcaggaccaacaaggagaaggcattcctcctggtgtttgggaaaagc
aagaagcgagatctcttttacaacgagatcaaagcacgttcgggtcacgacaacaaaacc
gtctacgagtatctgttcaaccagcgacggatgaggcgagctcctccgccaagaggcgcc
aagaaacccctccgggtcccctctcagatcctcctgcagcaccaggcagccaagtccagg
ccgcgctgccaccgccggcgactccatgtcaacttcaaggacatgggctgggacgactgg
atcatcgcgccgctggagtacgacgcctaccactgcgacggcgcctgtgacttccccata
cgctcgcacctggagcccaccaaccacgccatcatccagaccctgatcaactccatggag
ccggacacgaccccgcccacctgctgcgtcccgacgcgcctcagctccatcagcatcctc
tacatcgactcggccaacaatgtcgtctataagcagtacgaggagatggtggtggagtcc
tgtggctgcaggtag
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