Xiphophorus couchianus (Monterrey platyfish): 114136079
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Entry
114136079 CDS
T05908
Name
(RefSeq) thyrotropin-releasing hormone receptor-like
KO
K04282
thyrotropin-releasing hormone receptor
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04020
Calcium signaling pathway
xco04080
Neuroactive ligand-receptor interaction
xco04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
114136079
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114136079
04081 Hormone signaling
114136079
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
xco04030
]
114136079
G protein-coupled receptors [BR:
xco04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
114136079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7tm_4
7TM_GPCR_Srw
DUF6164
Motif
Other DBs
NCBI-GeneID:
114136079
NCBI-ProteinID:
XP_027859668
LinkDB
All DBs
Position
2:8122553..8162132
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AA seq
448 aa
AA seq
DB search
MTHNLSSRIDTPTNISLSAAVAVSDSLEYKTISVFLVLLVCCVGIVGNIMVVLVVVTTRH
MRTPTNCYLVSLAIADLTVLVAAGLPNVSDSLTGTWIYGNVGCLGITYLQYLGINVSSCS
ITAFTVERYIAICHPIKAQTVCTVSRAKRIITGVWIFTCVYCMLWFFLVDIQVGQDGHVQ
CGYRVKRELYLPIYLIDFTIFYVIPLLLAIVLYGLIARVLYLSPLPSHTETSATTLRRSC
CETSEAARMGRQGRPKTAVSSRKQVTKMLAVVVILFALLWMPYRTLVLINSFVSTPYLDS
WFLLFCRTCIYANSAINPVIYNAMSQKFRSAFRGLYSCQRVDGNQRTLSTAQTCFGTVRD
PRPALQNSNQGNEKETRAVLEPSSDSTSTLHRSEHQEMAAVNGMTADHRPDGGHQDFRRE
PGETLQGGGQELDQSVNKTLGSADRTSK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacccacaacctcagctccagaattgacacgccgaccaacatctccctgagcgccgcc
gtcgccgtctccgactcgctggagtacaagacgatctcggtgttcctggtgctgctggtg
tgctgcgttggcatcgtggggaacatcatggtggtcctcgtggtcgtcaccacgcgccac
atgaggacgcccaccaactgctacctggtgagcctggccatagccgacctgacggtgctg
gtggcggcagggctgcccaacgtatccgacagcctgacgggcacctggatctacgggaat
gtcgggtgtctgggcatcacctacctgcagtacctggggatcaatgtgtcctcgtgctcc
atcactgctttcaccgtggagaggtacattgctatctgccatcccatcaaggctcagacg
gtgtgcacggtgtcgcgtgccaaacggatcataacgggcgtctggatcttcacctgcgtc
tactgcatgctgtggttcttcttggtggacattcaggtcggccaggacggacatgtgcag
tgtggctaccgagtgaaacgggagctctacctccccatctacctcatcgacttcaccatt
ttctacgtcatcccgctgctcctcgccatcgtgctgtacggcctgatagcgcgggtgctc
tacctcagccctctgccgagccacaccgaaaccagcgccaccacgctgcgaaggagctgt
tgcgagacatcggaggctgcgaggatgggccgacagggccggccgaagacggcggtctcc
tccaggaaacaggtgacgaagatgctcgccgtggtggtgatccttttcgccctgctgtgg
atgccctaccggaccttggttctgatcaactccttcgtgtccacgccctacctggactcc
tggttcctgctgttctgtcggacctgcatctacgccaacagcgccataaaccccgtgatt
tacaacgccatgtctcagaagtttcgctccgcgtttcgggggctgtacagctgccagcga
gtggacggtaatcagcggacgctgtccaccgcccagacctgctttggtaccgttcgagac
ccgcggcctgccctgcagaacagcaaccaaggcaatgaaaaggagacgcgggccgtcctg
gagccttcctcggattcgacgtcgacgctccacaggagcgaacatcaggagatggcggcg
gtgaacgggatgacggccgatcatcggcccgacggcggccatcaggacttcagaagagaa
ccaggagaaacgctgcagggaggcggtcaggaattagatcagtcagttaacaaaacactt
ggttctgcagacagaaccagtaaataa
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