Xiphophorus couchianus (Monterrey platyfish): 114136236
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Entry
114136236 CDS
T05908
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04217
Necroptosis
xco04622
RIG-I-like receptor signaling pathway
xco04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
114136236
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
114136236
04625 C-type lectin receptor signaling pathway
114136236
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xco01002
]
114136236
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114136236
Enzymes [BR:
xco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114136236
Peptidases and inhibitors [BR:
xco01002
]
Cysteine peptidases
Family C67
114136236
Ubiquitin system [BR:
xco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114136236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
114136236
NCBI-ProteinID:
XP_027859902
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All DBs
Position
20:complement(24071455..24080253)
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AA seq
712 aa
AA seq
DB search
MEPKAASKDRFFIVIRGKSRRGFCRGCIGRVEAETARGELTGLMYGCGSNAGSPKNGGPV
KAEDAYPLTRHQAQLLLYISSPSRRLEMLCNPQLFSAICELTPGDLVVIRYKKGHVPGVV
KNLMQIGKKESKDDLNMLGFQVEFVDAEDNLSSKQLGPLPIFTASDIIQVIPSYSVPLGL
EYRDIKRGGSTGTVVMRINSMQSVGTLRGQAADSQSERSVVAGQTQSEPPVPLEVGSLVE
VVNNAGVTVYGVIRWLGIPDGKPETWAGLELDYEVTGYSDGVYKYQRYFTCRQNCALFVP
VTKCSPDSRFLCSATETETFKTTEIPPVPAYEESEEDAPPVPESEAASLFVGKMKGIQGH
INSCYLDATLFSLFSSSVTVDAICNKPAGKEQPITCILKSIVNRLRRQGFVPAQSVMNLR
KKLGCETFSKNEKDPEEFISVLFQKVLCIEPLLKLRSEGGSSHGAYTLQIFLEKEQMGQT
PTVQKLLDTSCMSGDIKFETMPSCLIIQMPRCGSKYKMFSHIVPSTELDVTDLLYNSPRE
CFICGQMAKFECLQCLPDHKLQPGRIKQYCSTCNTQVHTHRSRCSHSPKALALPEGVATD
APPPRRTMQLFGVLCIQTSHFVSFVKYGPDPHSWLFFDSMADRHGDDEKGYSVPEVRACP
ELGDFLGQPEEEQTRANPALAPELVCRLLCDSYMYLYHSPEMSVSKPSDEEQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaaagcagcgagcaaggaccggttcttcatagtcatccgcgggaagtcgcgg
aggggcttctgccgcggctgcatcggtcgcgtggaggcggagacggcgcgcggggagctg
acggggctcatgtacggctgcggctccaacgccgggagccccaagaacgggggcccggtg
aaggcggaggacgcgtaccccctgacccgacaccaggcccagctgctgctctacatctcc
agccccagcagacgcctggagatgctgtgcaacccgcagctcttctcggccatctgcgag
ctgaccccgggcgacctggtggtgatcaggtacaagaagggccacgtccccggggtggtg
aagaacctgatgcagatcggaaagaaggagagcaaggacgacctgaacatgctgggcttc
caggtggaatttgtggacgccgaagacaacttgtcgtccaaacaacttggaccgcttccc
attttcaccgcttcagacatcatccaggtgatcccgtcttactccgtccccctgggactg
gagtacagagacatcaaaagaggcggctcaactgggacagtggtgatgcgcatcaactcc
atgcaaagtgtcgggacgctcagaggacaagccgccgacagccaatcggagcgaagcgtc
gttgcaggccagacgcagagcgagcctcccgtccctctagaggtcggctccttggtggag
gtcgtcaacaacgcaggggtcacggtgtacggagtgatccggtggttggggatcccagac
gggaagccggagacgtgggccgggcttgagctggactatgaagtgacgggctactctgac
ggggtgtacaaatatcagcggtacttcacctgcaggcagaactgcgctttgtttgttccc
gtcacaaaatgcagcccagacagccggttcctctgctccgccacggaaacggagacgttc
aagaccacagaaatccctccagttcctgcatatgaagagtcggaggaagatgcgccgcct
gtccctgaatcagaggcagcgtcgcttttcgtggggaagatgaagggcatacagggtcat
atcaactcatgctacctggatgctacacttttcagtttgtttagttcatctgtgactgtg
gatgccatctgcaacaaaccggctggcaaagagcaaccaataacctgcatcctgaaatcc
atagtcaatcgcttgcgcagacaaggcttcgtgccagcacagagtgtgatgaacttgcgg
aagaaacttggctgtgagactttcagcaaaaacgaaaaagatcccgaggagttcatttca
gtgctgtttcagaaggtgctctgcatcgagcccctgctgaagctccgatcggagggagga
agctctcacggagcctacacactccagatctttctggaaaaggagcagatgggccagacg
cccaccgtccaaaagctgctggacacgtcctgcatgtcgggcgacatcaaattcgaaacc
atgccgtcttgcctcataatccagatgccaaggtgtggaagcaagtacaagatgttttct
cacatcgttccatccactgagctggacgtcacagatctgctgtacaactctcctagggaa
tgtttcatctgcggacagatggcaaagttcgagtgtctccagtgtttgccagaccataaa
ctgcaaccaggaagaatcaagcagtactgcagtacctgcaacacccaggtacacacccat
cggtcacggtgcagccattctcccaaggcgctggctctgcctgaaggcgtagccaccgac
gctcctccgccgaggcgcaccatgcagctgtttggtgtgctttgcattcaaaccagccac
tttgtgtcctttgtcaaatacggccctgatccccattcatggctcttctttgacagcatg
gcggacagacacggcgacgacgagaagggctacagcgttcccgaggtccgagcttgtccc
gagcttggcgacttcctgggccagccggaggaggaacagacccgggcgaacccggctctc
gcgccggagctggtctgcaggcttctgtgcgactcctacatgtatttataccacagccca
gaaatgtcggtctcgaagccaagcgacgaggaacagtag
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