Xiphophorus couchianus (Monterrey platyfish): 114136284
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Entry
114136284 CDS
T05908
Name
(RefSeq) probable nuclear hormone receptor HR38
KO
K04465
nuclear receptor subfamily 4 group A member 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114136284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114136284
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xco03310
]
114136284
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
114136284
Nuclear receptors [BR:
xco03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
114136284
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
114136284
NCBI-ProteinID:
XP_027859990
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Position
20:19830558..19837560
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AA seq
590 aa
AA seq
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MPCVQAQYASLPYDNFFSSELLNPDLSAKLAMEISGQKDQLSSSSLPSINTLMGNGYIGE
FDAYSCKVTTSPPASAASYNHAAAESPSPQMQNQAFKLDDLQVYGCYPGSFSLSCLEETH
SSCGSDYYGSPIYGTGSPPTPGFQTESAAVWDSPFSPFPPALPSSVEKATMAQQFSFFTF
SNAQDQHSPLGQHQDLPSCQEDGFFHLSQHQHVSPLHCPPLSLDHGRLESPRALEEAMMS
QKTPSLGSSEGRCAVCGDNASCQHYGVRTCEGCKGFFKRTVQKNAKYVCLTNKDCPVDKR
RRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKTTVEALSTTPSVNIIASLIR
AHLDSDPGIEKLDYSKYQERSDSLKEKEDAGDIQQFYDLLTGALDVIRNWAQTIPGFMDF
CAEDQELLLESAFVELFILRVAYRSKPEKNKLIFCNGLVLHRQQCANSFGGWIDSIMDFS
QSLHRMNLDNSLIACLSAFVIITDRHGLKEPKRVEDFQSNLISCLREHMSGIGSEVTRTQ
PNYLSRLLGKLPELRTLCTEGRQRIFYLKLEDLVPPPPIVEKIFMDTLPF
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgccctgtgtacaagcccagtatgcatctctgccctatgacaacttcttcagctctgag
ctcttaaatcctgacctcagtgccaaactggcgatggaaatctctggccaaaaggaccag
ctgtcatcatcctcactgcctagcatcaacaccttgatgggaaatggttacattggggag
tttgatgcttactcctgcaaggttaccacttcccctcctgcctctgcagcttcttacaac
catgctgctgccgaaagccctagcccacagatgcagaaccaagccttcaagctggatgat
cttcaagtgtatggctgctacccaggatccttttctctcagctgtcttgaagaaacacac
tcatcatgtggatctgattattatggaagccccatctacggcactggttctcctccaaca
ccaggctttcagactgagtctgcagctgtctgggattcccctttcagccccttcccccca
gccctcccctcctctgttgagaaggccaccatggcgcagcagttttcattttttaccttc
agcaatgcacaggaccagcactctcctttgggtcaacatcaggatctaccatcttgtcaa
gaagatggcttctttcatctctcacaacatcagcatgtctccccacttcactgccccccc
ctgtccctggaccatggacggctggaaagcccgagggcactggaggaggctatgatgtct
cagaaaacccccagccttggatccagtgagggtcgctgtgcagtgtgtggcgacaacgca
tcctgccagcactatggagtccgaacctgtgagggatgcaaaggtttcttcaagcgaact
gtgcagaaaaatgcaaagtatgtgtgcctcaccaataaagactgcccggtggataagagg
aggagaaaccgatgccagttctgccgtttccagaagtgtcttgctgtgggaatggtcaaa
gaagttgttcgcacagacagcctcaaaggtcgcagaggtcgcctaccttctaaacctaag
accacggttgaggctttgtcaacaactcccagtgtgaacatcatcgcttctctcatcagg
gctcatttggactctgacccgggcatcgaaaagctcgactactccaagtaccaggagagg
tcagacagtctgaaagaaaaggaggacgccggtgacatccagcagttctacgacctgctg
accggtgccttggatgtaataagaaactgggctcaaaccatcccgggattcatggacttc
tgtgcagaggaccaggagcttcttcttgagtctgcctttgtggagctcttcattcttcgt
gttgcatacaggtcgaagccagagaagaacaagctgatcttctgcaacggcctggtcctc
caccggcagcagtgcgccaacagttttggtggctggatcgactccatcatggatttttca
cagagtcttcaccgcatgaacttagacaactctctgattgcctgtctgtcagcatttgtc
attatcaccgatcgccatggcctgaaggagcccaaaagagtagaggactttcagagcaac
ctcatcagctgtttaagggaacacatgagtggaattggatcggaagtgacacggacgcaa
cccaactacctgtcccgtctgctgggcaagctcccagagctgaggactctgtgcactgag
ggccggcagcgcatcttttacttgaaactggaagacttggttcctcctcctccgattgtg
gagaaaatctttatggatacacttcccttttga
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