Xiphophorus couchianus (Monterrey platyfish): 114136285
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Entry
114136285 CDS
T05908
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114136285 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114136285 (nelfcd)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
114136285 (nelfcd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
114136285
NCBI-ProteinID:
XP_027859991
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All DBs
Position
20:19719673..19727620
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AA seq
578 aa
AA seq
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MDDEYYGGAGDWESAEGPLEDGYDEENDGKVQEDCLLKFSSRDYIMEPAIFNTLKRYFQA
GGSPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQKA
DSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVS
TACQQLEVFSRVLRTSLATLLDGGEENLEKNLPEFAKMVCHGEHTYLFAQAMMSILAQEE
QGGSAVRRISQEVQKSAHQRGHDASQITLALGTAAAYPRACQALGAMLSKGALNPADITV
LFKMFSSMDPPPVELIRVPAFLDLFMQSLFKPGSKINQDHKHKYIHILAYAASVVETWKK
NKRVNINKEELKTTSKAIETVHNLCCNENKGATELVAELGTLYQCIRFPVVAMGVLKWVD
WTVSEPRYFQLQTDHTPVHLALLDEICTCHQLLHPQVLQLLIKLFETEHSQLDVMEQLEL
KKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSVFVQL
FLPILENDSIAGTIRTEGEHDPVAEFIAHCKSNFIMIN
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaatattacggaggggcaggagactgggagagcgcggaggggccgctggag
gatgggtacgatgaggaaaatgatgggaaagttcaggaggactgtctgctgaaattctcc
agcagggactacatcatggagcctgcaatattcaacaccctcaaaagatatttccaagca
ggcggctctccagaacacgtcatccagcttctctctgagaactactctgccgttgcacag
actgttaatctgctggcagagtggctcattcagatgggtgtagaaccggctcaggtccaa
gagcgagtagaaaaccaccttaagagtctcctgataaagcactttgacccccagaaagcc
gactccatcttcacggttgagggagagactccagcttggctcgagcagatgatagcacac
acaacatggagggatctcttctacaagctggcagaggctcaccccgactgcctgatgctc
aacttcactgtaaagctcatttctgatgcaggctatcagggagagatcaccagtgtttcc
acagcgtgtcagcagctggaggttttctcccgggtgctgaggacgtctttagccacgctg
ctggacggaggagaagaaaacctagagaagaacctgccagagtttgctaaaatggtgtgt
catggtgagcacacgtacctctttgcccaggccatgatgtccatcctggctcaggaggag
cagggcggctccgctgttcgtaggatcagccaggaggtccagaagtcggcacatcagagg
ggtcatgatgccagtcaaataacccttgctcttggtacggcagcagcctaccctcgagcc
tgccaggctttgggtgccatgttgtctaaaggagccctgaatcctgccgacatcacggtt
ctcttcaagatgttcagcagcatggaccctcctcctgtggagctgatcagggtgcccgcc
tttctggaccttttcatgcagtcactttttaagcctggatcaaaaattaatcaggaccat
aaacacaaatacatccacatcttggcttatgctgccagtgtggttgagacgtggaagaag
aacaagagagtcaacatcaataaagaggagttgaagacaacatccaaggccattgagacc
gtgcacaacctctgctgtaatgagaacaaaggagcgacggagctggtggctgaactcggc
acgttataccaatgcatccggtttccagtggttgccatgggagttttaaagtgggtggac
tggaccgtctcagagccccgctacttccagctgcaaacagaccacaccccggtccattta
gcccttctagacgagatctgcacgtgccaccagctgctgcacccgcaggtcctgcagctg
ctcatcaagctctttgagacggagcactctcagctggacgtcatggagcagctggagctg
aagaagactctgctggaccgaatggttcacctcctgagccgcggctacgtcctgccggtc
gtcagctacatccgcaagtgtctggagaaactcaacacggacatctccctcattcgatac
tttgtcactgaggtgctggatgtgatcgcgcctccatacacgtcggtcttcgtgcagctc
ttcttgcccatcctggagaacgacagcatcgcaggaacgatccgcacggagggagaacac
gacccggtcgccgagttcattgctcattgcaagtcaaacttcattatgattaactga
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