Xiphophorus couchianus (Monterrey platyfish): 114136393
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Entry
114136393 CDS
T05908
Symbol
shh
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
114136393 (shh)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xco01002
]
114136393 (shh)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
xco00536
]
114136393 (shh)
Peptidases and inhibitors [BR:
xco01002
]
Cysteine peptidases
Family C46: hedgehog family
114136393 (shh)
Glycosaminoglycan binding proteins [BR:
xco00536
]
Heparan sulfate / Heparin
Morphogens
114136393 (shh)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
DrmE_C
Hint_2
Peptidase_M15_3
Intein_splicing
Vint
Hom_end_hint
VldE
Motif
Other DBs
NCBI-GeneID:
114136393
NCBI-ProteinID:
XP_027860058
LinkDB
All DBs
Position
21:9153669..9163551
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AA seq
411 aa
AA seq
DB search
MHQRWTRIASVALICLSLVSSAMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGAS
GRYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRMMTQRCKDKLNSLAISVMNQWPG
VKLRVTEGWDEDGHHFDESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKA
HIHCSVKAENSVAAKSGGCFPGSSTVTLQDGTKKPVRDLQPGDRVLAADGVGNPIFTDFI
MFIDRDSTTRRTFYVIETETGQKITLTAAHLIFVARENSTRSATFASDVRPGQKVFVYDG
ERRRVVAVNVKRIYTQEHEGSFAPVTAQGTVVVDQVLASCYAVIEDHQLAHWALAPVRIA
HWVSSSLFISRPRVSAHNEGVHWYSKLLYQLGTWLLDDHSIHPLGMSAYPS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcgctggaccagaatcgcttctgtcgctctcatctgcttgtccttggtgtcc
tccgcgatgggatgcggaccgggcaggggctacggcaggaggagacaccccaagaagctg
acacctctggcgtacaagcagttcatccccaatgtggcggagaagaccctgggggcgagc
ggtagatacgagggcaagatcacacggaactccgagcgctttaaagagctcactcccaat
tataacacagacatcatcttcaaggatgaggagaacacaggagccgacaggatgatgact
cagagatgcaaggacaagctgaattcgctggccatctctgtgatgaaccaatggcccggg
gtgaaactccgggtcacagagggctgggacgaggacgggcaccactttgacgagtccctg
cactatgagggcagggccgtggacatcaccacctcagacagagacaagagcaaatatggc
accttgtccaggctcgccgtggaagccggattcgactgggtctactatgagtcaaaggcc
cacatccactgctctgtgaaagcagaaaattcagtggcagcaaagtcaggtggctgcttc
ccgggatcctccacagtcaccctgcaggacggcaccaagaagccggtcagagacctccaa
cccggggacagagtcctggctgcggacggcgtcggaaacccgatcttcaccgacttcatc
atgttcatagaccgagactccaccaccaggaggaccttctacgtgatcgagaccgagacg
ggccagaagatcaccctcaccgccgcgcacctcatctttgtcgcccgcgagaactccacg
cggtcggcaacgttcgccagcgacgtgcgacccggacagaaggtgttcgtctacgacggg
gagcggaggcgagtcgtggccgtgaacgtgaaacggatttacacgcaagagcacgagggc
tccttcgcgcccgtgacggcacaggggaccgtggtggtggatcaggttctggcatcctgt
tacgcagtgatcgaggaccaccagcttgcgcactgggccctggcgcccgttaggatcgcc
cactgggtgtcctcctcgctgttcatctcccggcctcgggtcagcgcgcacaacgagggg
gtccactggtactccaaacttctttaccagctggggacgtggctcttggacgaccactcg
atccatccactgggaatgtcagcatacccaagctga
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