Xiphophorus couchianus (Monterrey platyfish): 114136529
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Entry
114136529 CDS
T05908
Symbol
gtf2h1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03022
Basal transcription factors
xco03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114136529 (gtf2h1)
09124 Replication and repair
03420 Nucleotide excision repair
114136529 (gtf2h1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114136529 (gtf2h1)
03400 DNA repair and recombination proteins [BR:
xco03400
]
114136529 (gtf2h1)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114136529 (gtf2h1)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114136529 (gtf2h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
114136529
NCBI-ProteinID:
XP_027860368
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All DBs
Position
2:11583109..11591079
Genome browser
AA seq
550 aa
AA seq
DB search
MASLSEEVLLVVKKVRQRKQDGTLYLMAERIAWGPEGKDRFTVSHLYSDIRCQKISPDGK
AKIQLQLVLHTGDSTTFHFANESTALKDRDAAKELLQQLLPKFKKKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISADEFWANRLGGMNNGEPAPYNNKQEVGISGAFLADIRPQTDG
CNGLRYNLTADIIESIFRTYPAVKQKYSENVPHNLTEKEFWTRFFQSHYFHRDRINTGSQ
DIFSECAKQDEKGLKSLVIQGVKNPLVDLLSLEDKTLDEGYGISKALPSTSNANKSVKES
SNSAIIKRFNHHSAMVLAAGSRKGDVTTDLASETSSTDGNSRDSDFFQPPLKKVKLQEAI
EYEDLQRENTPKTVALNLKKSDRYAHGPVPLQSQQYTTSQDIINSVGYIQQEMANYKPNL
TRVLSSTTATSAIAALSPGGVLMQSVGQQSINQMVPNDIQGELKHLYIAAGELLRHFWSC
FPVNTPFLEEKVTKMKTNLERFQLTKLRPFQEKIQRQYLSTNLTGHLEDMFQSAYSKFHI
WQTRRMMRKT
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcatctctgtcagaggaggttctgctggtggtgaagaaagtccgtcagaggaagcag
gatggcacactctacctgatggctgaaagaatagcctggggtccagaaggcaaagaccgc
ttcactgtcagccacctgtattcagacatccgctgtcagaagatcagtcctgatggtaaa
gccaagattcagctccaactggtccttcacaccggagatagtaccacattccactttgcc
aatgagagcactgcacttaaagacagagatgctgccaaggagctgctgcagcagctactg
ccaaagttcaagaagaaggccaacaaggagctggaggagaaaaacaggatgcttcaggaa
gatccggtgcttttccaactgtacaaagatcttgtggtgagccaagtgatcagtgctgat
gaattttgggccaaccggttaggaggcatgaataatggggaacctgcaccttacaacaac
aaacaggaagttggaatctctggagcatttctagcggacatcagaccacagactgatggc
tgcaatggcttgagatataatctgactgcggacattatcgagtccatatttagaacatat
cctgcagtgaagcagaagtatagtgaaaatgtgcctcataacctgacggagaaggagttc
tggacgcgcttttttcagtctcattatttccacagagaccgcatcaacacaggttctcag
gatattttctcagaatgtgccaagcaagatgagaaagggttaaaatctctggtgatccaa
ggagtgaagaatccattggttgaccttttgtcattggaggataaaacattagacgagggt
tatgggataagcaaagccctaccttcaacctcaaatgcaaacaagtcagtgaaagagagt
agtaactctgccattataaagcgattcaaccatcacagcgctatggtgctggcagcaggc
tcacgcaagggagatgtgaccactgacctagccagtgagactagcagcacagacggcaac
tccagagattctgatttctttcagcctccactgaagaaggttaaactacaagaagccata
gaatatgaggatctgcaaagggaaaatactcctaagacagtggcgttaaatctgaagaag
tctgacaggtatgctcatggtcctgttccacttcagtcccagcagtatacaaccagccaa
gacatcatcaactctgttggctacatccagcaggagatggccaattacaaacccaaccta
actcgggtgttgtccagcaccacagcaacctctgccatcgcagcgctctctccaggaggc
gtccttatgcaatctgttggacagcaatccataaaccaaatggtgcccaatgacatccaa
ggagagctgaagcacctttacattgctgcaggggagttattgagacacttttggtcctgt
tttcctgtaaacacaccatttttggaggaaaaggtgacaaaaatgaagacaaacttggaa
agatttcaattgaccaagcttcgtccttttcaggagaaaatccaacgtcagtacttgagt
acaaatcttacagggcacctggaggacatgtttcagtcggcctatagcaagtttcatatt
tggcaaacccgcaggatgatgaggaaaacctga
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