Xiphophorus couchianus (Monterrey platyfish): 114136601
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Entry
114136601 CDS
T05908
Name
(RefSeq) lethal(3)malignant brain tumor-like protein 4 isoform X1
KO
K24387
lethal(3)malignant brain tumor-like protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
114136601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114136601
03036 Chromosome and associated proteins [BR:
xco03036
]
114136601
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys2HisCys zinc factors
114136601
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
114136601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
zf-C2HC
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
114136601
NCBI-ProteinID:
XP_027860472
LinkDB
All DBs
Position
21:425260..431300
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AA seq
639 aa
AA seq
DB search
MRAALPASSFRVVLCVSAVTRIITVERRSEGTTEEDEEEMKNKVSSTQVSVKRRSWSWQQ
YLNEQKAEAAPPSLFTQDQSCPSRRTAFKVGMKLEGIDPLHPSMFCVLTVAEVIGCRLRL
HIDGYSECYDFWVNADSPDIRPAGWCREHRHKLHPPKGHSETEFDWQDYLQSSGSLAAPP
TMFTCRSTLCEFQVGMKLEAVDKKNPGLVCVASVADVINDRFLVHFDNWDDTYDYWCDSS
SPYIHPVGWCEVQGRPLTAPQGHPRPEDFVWDDYLQETGSTAAPSSAFTLRAPHGFQVNH
RLEAVDRRNPMLIRVATVTDTEDYRVKVHYDGWSTQLDVWMDSDHADLHPTGWSQRTGHP
LEPPPGLSPLPSPSQGVCPTAGCRGVGHIKGAKYTGHHSAFGCPYSDINLRKEVVLPDRL
GGERSITLVPVSLSHLHSRGVQVKQESSDVPLLPLGKRKRLPDRLTQPTKCLRVKQEEEE
LPLRTISPESSLQAVLHQSVFLSAMSAQPGRDLSLCWEQHRKLLPGVARLHADAVRRWTV
QQVSDFVESLPGCEDQAQLFRDEQIDGRAFLLLTQRDIVRIMSIKLGPALKIYNSILMFK
HAEDKSQSQAEDKSQSQAEDKSQSQAEDKSQSDVQDPST
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctgccctcccagcctccagtttccgtgttgttctgtgtgtcagcgcagtgacg
cggatcatcacagtcgagagaagaagcgagggaaccacagaggaagacgaggaggagatg
aagaacaaagtcagcagcactcaagtcagcgtgaagaggcgctcctggtcctggcagcag
tacctgaacgagcagaaggccgaggcagctccaccctctctcttcacccaggaccagtcc
tgtcccagcaggaggacggccttcaaggtgggcatgaagctggagggcatcgacccgctg
catccctccatgttctgtgtgctgaccgttgccgaggtgattggctgccggctgcgtctc
cacatcgacggatactctgagtgctatgacttctgggtaaacgccgactcacctgacatc
agacccgccggatggtgcagagagcaccgccacaagctccacccacccaaaggtcacagt
gagacggagttcgattggcaggactacctgcaatcctcagggtccctcgcagctccgccc
accatgttcacctgtcgctccaccctgtgtgagttccaggtggggatgaagctggaggca
gtggacaagaagaacccgggactggtgtgtgtggcgtctgtcgctgatgtcatcaacgac
cgcttcctggttcacttcgacaactgggacgacacctatgactactggtgtgacagcagc
agtccctacatccatccggtgggctggtgtgaggtgcagggccgaccgctgaccgcgccg
cagggtcatcccaggccagaggactttgtgtgggacgactacctgcaggaaactggttcc
acagctgctcccagttcagcgttcacactgagagctccgcacggtttccaggtgaaccac
aggctggaggcggtggacaggaggaaccccatgctgatccgcgtcgccacggtgacggac
accgaggactacagggtgaaggtccactacgacggctggtccacccagctggacgtctgg
atggacagcgaccacgcagacctccacccgacggggtggagccagcgcaccgggcacccg
ctggagccccccccagggttgtccccactgccgtccccgtctcagggagtgtgtcccact
gccggctgcagaggcgtcggacacatcaaaggagccaaatatacgggacaccacagtgcc
ttcggctgtccgtactcagacatcaacctgaggaaggaggtggttctgcccgaccggctg
ggtggggagaggtccatcaccttggtgcccgtgtccctgtctcaccttcacagcagaggc
gtccaggtgaagcaggagtccagtgatgtccctctgctgcctctggggaagaggaaaaga
ttacctgacagactgacccaaccaaccaaatgcctgcgtgtgaaacaggaagaggaggag
cttcccctcagaaccatcagtccagagtccagtctgcaggccgtcctccatcagtccgtc
ttcctgtcggccatgtcggcccaaccgggtcgcgacctctctctctgctgggagcagcac
aggaagctgttgccgggcgtggcccgtctccacgccgacgccgtccgccgctggaccgtc
cagcaggtgtcggacttcgtggaatctcttcctggatgtgaagatcaggcccagctgttc
agagacgagcaaatagatgggcgggccttcctgctgctcacccaacgggacattgtcagg
atcatgtccatcaagctcggccccgccctcaagatctacaactccatcctgatgttcaaa
cacgccgaggacaagagccaatcacaggccgaggacaagagccaatcacaggccgaggac
aagagccaatcacaggccgaggacaagagccaatcagatgtccaggatcccagcacctga
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