Xiphophorus couchianus (Monterrey platyfish): 114136667
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Entry
114136667 CDS
T05908
Symbol
smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114136667 (smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114136667 (smarcd3)
03036 Chromosome and associated proteins [BR:
xco03036
]
114136667 (smarcd3)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
114136667 (smarcd3)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
114136667 (smarcd3)
PBAF complex
114136667 (smarcd3)
GBAF(ncBAF) complex
114136667 (smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
TFIIA
Ribosomal_uS5m_N
Motif
Other DBs
NCBI-GeneID:
114136667
NCBI-ProteinID:
XP_027860609
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All DBs
Position
21:complement(7430818..7479499)
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AA seq
518 aa
AA seq
DB search
MATEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PSPVMEPSRKRPAPSQQVQQQQQQQQQQQQQQQAVQNRARKKPVGFPGASEMPARQMDMR
EPQSDPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEA
LKRPMKQQKRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFF
KSLVIELDKELYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLDYQPPQFKL
DLRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEI
PQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVEDPLKSQMSSFLLSTANQQEI
ASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVVGNPEEER
RAAFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggctacggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggcatgccgtctggagcgaggatgccccaccaagga
gcccccatggggccccctggtcccccgtatggagggagtccggcagtgcggcccggcctg
ccctccccggtgatggagccgagtcgtaagcggcccgccccgtcccagcaggtccagcag
cagcagcaacagcagcagcagcaacaacagcagcagcaggccgtgcagaaccgcgccagg
aagaagccagttggatttcccggagccagcgagatgccggcgaggcagatggacatgaga
gagccccaatcagatcccacgcttggatcaaatgctaagagaaggaaaatggcagacaag
attcttccgcaaaggatccgggaactggtacctgaatctcaggcctacatggatttactg
gcttttgagcgaaagctggaccaaaccattatgcggaaacgcgtcgacatccaggaagct
ctgaagagaccaatgaagcagcaaaagcgtaaactaaggctctatatttcaaacacgttc
aacccagctcgacctgacgctgatgactcagatggcagcattgcatcatgggagctgagg
gtagagggaaagctgctggatgatccggggaagcagaagaagaagttctcttcctttttt
aagagcttggtgatcgagctggacaaagagctgtacggtccggacaaccacctggtcgag
tggcaccgcacacccaccactcaggagacagacggcttccaggtgaagagacccggagat
gtgagcgtgcgctgcaccctgctgctgatgctggactaccagcctccccagtttaagctg
gacttgcgcctggcgcgcctgctgggcatccacactcagactcgctcttgcatcattcag
gccctctggcagtacgtgaagaccaacaagctgcaggactcgcatgacaaagagtacatc
aactgtgacaagtacttccaacagattttcgactgtcctcgcctgaagttttctgagatt
cctcagcgcctcactaacctcctgctaccgcccgaccccatcgtcatcaatcatgtgatt
agcgttgaccccaacgaccagaagaagacggcttgctacgacattgacgtggaggtggaa
gaccccctcaagagccagatgagcagcttcctcctctccaccgccaaccagcaggaaatt
gcctccctcgacaacaagatccatgagaccatcgagtccatcaaccagctgaagatccaa
cgggacttcatgctcagcttctccagagatcccaaaggctacatccaagactggctcaag
tcccaaagccgagacctcaagttgatgaccgacgtggtggggaaccctgaggaagagcgg
agggcagcgttttaccacgaaccctggtcccaggaggcggtcagccgctacttctactgc
aagatccagcagaggagacaggagctggaacaggccttagcagtccgcaacacctaa
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