Xiphophorus couchianus (Monterrey platyfish): 114136718
Help
Entry
114136718 CDS
T05908
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114136718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114136718
03016 Transfer RNA biogenesis [BR:
xco03016
]
114136718
03012 Translation factors [BR:
xco03012
]
114136718
04131 Membrane trafficking [BR:
xco04131
]
114136718
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114136718
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
114136718
Transfer RNA biogenesis [BR:
xco03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
114136718
Translation factors [BR:
xco03012
]
Eukaryotic type
Elongation factors
114136718
Membrane trafficking [BR:
xco04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
114136718
Exosome [BR:
xco04147
]
Exosomal proteins
Proteins found in most exosomes
114136718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Ras
Motif
Other DBs
NCBI-GeneID:
114136718
NCBI-ProteinID:
XP_027860726
LinkDB
All DBs
Position
21:complement(7566883..7569914)
Genome browser
AA seq
457 aa
AA seq
DB search
MVREKAHVNVVIIGHVDSGKSTTTGHLVYKCGGVDQRKLEKFEKAAAQMGKSSFKFAWLL
DKLKAERERGITIDISLLKFNTQKYSMTIIDAPGHRDFIKNMITGTSQADVALLVVSAAK
GEYEAGVSRSGQTREHALLAYTLGVKQIIVCVNKMDLTEPPYSQKRYDEVVRGVKVFLKK
IGYDTNAVPFVPISGWIGENMITPTQKMPWYQGWKVRLREGAESGKTLLEVLDSIKPPVR
TINKPLRLPLQDVYKIGGVGTVPVGKIETGVLKPGMTLMFSPAKLTAEVKSIEMHHQGLD
TALPGHNVGFNIKSVSVKNLQRGDVAGNAQHDPPSDVRSFEAQVIILNHPGKIKMGYSPV
LDCHTAHVTCRFAELKEKLDRQTGKKLEDNPQLLQSGDAATVKLVPIKPMCVESFFTYPP
LGRFAARDLKQTVAVGVIKSVEKEKGSKASQKTQPSK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggtgagagaaaaggctcacgttaacgtcgtcatcatcggccatgttgacagcggcaaa
tccaccaccactggacacctggtctacaagtgtggcggtgtggaccagcggaaactggag
aagtttgagaaagctgcagcccagatggggaagagttccttcaagttcgcctggctgctg
gacaagctgaaggctgagcgggagcggggaatcaccatcgacatctctttgctgaagttt
aacacccagaaatacagcatgaccatcattgacgcacctggacacagagacttcatcaaa
aacatgatcactggcacatcccaggctgatgttgccctgctggtcgtctccgcagccaaa
ggggaatatgaagcgggtgtttccaggagtggccagaccagagagcatgccttactggct
tacactctgggcgtcaagcagatcatagtgtgtgtgaacaaaatggacctcacggagccg
ccgtacagccagaaacgctacgacgaagtggtccgaggagtgaaggtcttcctcaagaag
atcggctacgacaccaacgccgtgccgtttgttccgatctctggctggataggcgaaaac
atgatcacaccaacacaaaagatgccgtggtaccaaggctggaaggtccgactgagggaa
ggtgctgaaagcggaaagactcttctagaagttctggactcgatcaaacctccagtgcga
acaatcaacaaaccactacggctccctctgcaagacgtctacaaaattggaggtgttggg
acagttccagtgggaaagattgaaactggagtcctcaaaccaggcatgaccttgatgttc
tcccctgccaagctcactgcagaagtgaaatccatagaaatgcaccaccagggtctggat
acggctctgccagggcacaatgttggcttcaacatcaagagcgtctctgtaaagaacctg
cagcgtggagacgtggccggcaacgcccagcacgaccctccttctgacgtccgcagcttc
gaagctcaggtaatcatcctgaatcatccagggaagataaaaatgggctactctccggtc
ctggactgccacaccgctcacgtcacctgccgatttgctgagctgaaggagaaacttgac
cgccaaacagggaagaaactggaggacaacccgcagctgctgcagtctggagatgcagct
acagtcaaactggttcccattaagcccatgtgtgtggagagcttcttcacataccctcct
ttaggtcgctttgcagcaagagacttgaagcagacagttgcagtgggagtgataaagtct
gtggaaaaggagaaagggtcaaaagcttcccagaaaacacaaccatctaaatga
DBGET
integrated database retrieval system
