Xiphophorus couchianus (Monterrey platyfish): 114136727
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Entry
114136727 CDS
T05908
Symbol
ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114136727 (ptchd1)
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Other domain-containing proteins
Patched domain-containing proteins
114136727 (ptchd1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
114136727
NCBI-ProteinID:
XP_027860740
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All DBs
Position
21:complement(4881531..4896866)
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AA seq
973 aa
AA seq
DB search
MLGGAPGLSGRWERLEPRPRACRMLRQVLHAGLRTSFHALGRFVAGHAVFFASAPVLLAI
LLGASFSRYRVEGDVESLLAPKHSLAKIEGNLVESLFPVNRSKHALYSDLQTPGRYGRVI
ITARRGSVLDPVHLETILQLHRRIYQMQVTVPATTVGSSGFNYSFSYLCVPDDNNVCIVD
DIIRAMEEIQSARTSNRSVPVLHYPITQLADGRQAYIGHQLGGVQGWGHGGAVRPQGTGA
KGEGVRSAKAVQLTYYLQSRSGLMDRVAGQWEKAFCAELKLFGAIKLGLYPSTSSSLRTD
FQFSSVLARRPLLASLGVCGVLAILCCSMRDCVRSKPWLGMLALLSVALSGLTAAGILNL
TGATYNSTYLGIPFVMLGHGLFGSFEMLSSWRRTREDQHVKERVASVFEDVMLRFSGSTM
IHLMTLGLAASPLTNMEAVRLFCRTAALAITISYIYMLSFYSSCLVFTGYLETRYRHGCF
CRRVPKPDRLDSKPAWYRCLMYTRYQDETQSTNPLHGVGQNHMPNPNVTHIANSSGVHGH
MANSIQTHSPHHTHSTTTADPHPQDCHLLLGCVRHCYGDWITNTYVKPFVVLLYLVYISF
GLMGFLQVTQGSDPSALVATDTATVLYTRAQHRYFSSYSPVIGFYIYESAPYWNASVQRD
LLEYAKGFQRISWLEAYLSYLSDRNQSTSQPRENFTRTLRHSFLHEPQFAHFADDIIFAE
RGQGEEPDVAASRIFLVAKTTENKREEMSVLLDTLRRLSLTSRVRFLIFNPSFVYLDRYA
TAVSSPLRHSLLAVLFLLGLSSLVVVEPLVSLWLGVTLLSVQFGVLGFMTLWGVEMDCVS
VLCLITALGHSADCSGPLLCGFASGRGESRTRWVCLVLERHGIPSLQTLVCYSAALVPIC
AVRSNLTRTLFRCLTLTAGCSALHTLAFLPTLLTFLPPSKSRNHRPGREGQRQEVECVEM
NDSTRVVDQITTV
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgctcggcggcgctccggggctttccggtcggtgggagaggctcgagccacggccgcgc
gcctgtaggatgctgcgccaggtgttgcacgcgggactgaggacgtcattccacgcgctg
ggccggttcgtggccggtcacgcggtgttcttcgcctcggcgcccgttctgctggccatc
ctgctgggggccagcttcagccgctaccgcgtggagggggacgtggagagcctgctggcg
cccaagcacagcctggccaagatcgagggcaacctggtggagagcctgttccccgtgaac
cgatccaagcacgcgctctactccgacctgcagacacctggacgctacgggcgcgtgatc
atcacagcccgaaggggcagcgtgctggacccggttcacctggagaccattctacagctc
cacaggcggatctaccagatgcaggtgacggtcccggctacgacggtgggctccagcggc
ttcaactactccttctcttacctctgtgtccccgacgacaacaacgtctgcatcgtggac
gacataatccgggccatggaggagatccagtcagcccggacttccaaccgaagcgtcccg
gttctgcactaccccatcacacagctggcggacgggaggcaagcgtacatcgggcaccag
ctgggcggcgtgcagggctggggacacggcggggcggtgcgacctcaagggacgggagcc
aaaggggaaggcgtccgttctgcaaaagcggtgcagctcacctactacctccaatcccga
agcgggctgatggaccgggtggcgggtcagtgggagaaagccttctgtgccgagctgaag
ctcttcggagcgataaagctggggctttatccctccacgtcttcctcgctgcggactgac
ttccagttctcctccgtgctggcacgtcgccccctgctggcgagtttgggagtgtgtggg
gtgctggccatcctctgctgctccatgagggactgtgtgaggtccaaaccctggctgggt
atgctggctctgctgtctgtggctctgtcaggactcactgctgctgggatcctgaatctg
accggagctacatacaactccacttacctgggaatccctttcgtcatgctaggccacggt
ctcttcggctccttcgagatgttgtcatcatggaggcgaacgcgggaggatcagcacgta
aaagagcgagtggcaagcgtctttgaggatgtcatgctgcgtttctccggctccaccatg
atccacctgatgacgttgggtctggctgcctcgccgctcaccaacatggaggccgtccgc
ctcttctgccgcaccgctgccctcgccatcaccatcagctacatctacatgctgtccttt
tacagttcctgcctggtgtttacaggctacttggagacgaggtatagacatggctgcttc
tgtcggcgagtaccaaagccagaccggctggactcgaaaccggcttggtaccggtgtttg
atgtacacccgttaccaagatgagacgcaatcaacaaacccgcttcatggagttggtcag
aatcatatgccaaatcctaatgtaactcacatagcaaacagttctggtgttcatggacac
atggctaactccatacaaacacactcgccccatcacactcattcaacaacaaccgcagat
cctcaccctcaggactgccatcttttgctgggatgtgttcggcattgctatggagactgg
atcaccaacacttacgtcaaacccttcgtagttttattgtatctggtttacatctccttt
ggattgatgggctttcttcaggtaacccagggctctgatcccagtgcactggttgccacg
gatacagcaacagtgttgtacacgcgtgcgcagcatcggtatttcagctcctactcgcca
gtgattggattctacatctatgaaagcgccccctactggaatgcctctgtgcagcgggac
ctgttggagtacgccaaaggcttccagaggatcagctggctggaggcgtacctgagctac
ctgtccgaccgcaaccagtccaccagccagcctcgcgagaacttcactcgcacactgcgc
cactccttcctgcacgagccgcagttcgcccacttcgcagacgacatcatcttcgcagag
cgcggacaaggggaggagccagatgtggcggcctcgcgcatcttcttggtcgccaagacg
acggagaacaagcgcgaggagatgtcggtgctgctggacactctgcgccgtctgtctctc
acttctcgggttcgcttcctgatattcaacccctcctttgtgtacttggaccggtacgca
acggcggtcagctcccccctcagacactcactcctggcggtgctcttcctattgggtctg
tcctccctggtcgtcgtggaaccgctggtctctctgtggcttggagtcacccttctctct
gtccagtttggggttctgggcttcatgactttgtggggcgtggagatggactgcgtgtcg
gtgctgtgcctgatcacggctttgggtcactcggcagactgcagcggtcccctcctctgt
ggcttcgcctcgggccgcggtgaaagcaggactcgctgggtttgcttggtgttagagcga
cacggcattccctccctacagacgcttgtgtgctacagcgccgccctggtgcccatctgc
gctgtgcgctccaacctcactcgcacactctttcgctgcctcactctgacggccgggtgc
tcggccctgcacacactggccttcctgccgaccctcctcaccttcctgcctccctccaag
agcaggaaccatcggccaggaagagagggccagagacaggaagtggagtgtgttgaaatg
aatgacagcaccagagtagtggaccagatcaccactgtttga
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