Xiphophorus couchianus (Monterrey platyfish): 114136741
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Entry
114136741 CDS
T05908
Symbol
rbbp8
Name
(RefSeq) DNA endonuclease RBBP8 isoform X1
KO
K20773
DNA endonuclease RBBP8 [EC:3.1.-.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114136741 (rbbp8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114136741 (rbbp8)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-C complex
114136741 (rbbp8)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CtIP_N
SAE2
HALZ
Cnn_1N
XRCC4_CC
LCD1
IFP_35_N
Motif
Other DBs
NCBI-GeneID:
114136741
NCBI-ProteinID:
XP_027860771
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Position
21:complement(17442587..17449103)
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AA seq
644 aa
AA seq
DB search
MSSPGDRSGCSVSPADLFEDVWRQLKVCHQNTVQEYQSKVSKLRNDRCLDAQKLEAFYNR
NQQLKEQNKSLQDSISLLEDRLRVAECDRCAVLEEKLKSIQDQNLDVITKLKNENKNLED
ENRNLQAELQKMKVHHRCCFCISADLEETSEQDEGVIPDSPILTSSLPAANKLRKRKHPD
ESRRVRYAETPLPQKNNSLFNELKKAADGGAKNSGREVLVPNTCELDTSQSSNDMKEETE
EVVGETCALEVLDCRHFKAKLTPRHQDGTRNIRKRNSRLSPFSSAAQIRKPDSTTEKSPS
LLPSTKRFSEEGSFCWAKQKDSGTEQQGEGRAGSKEKVDNQKGAKPLQLETTSQAATLGF
KQEQGPNQTLNISYASPTFKRPLSKAGDKPDGSRRAPPQDRSASQKRLQSNNAGRKEMVE
STWSVDPALALSVFESEEVEEQRPGELADTDCTWVSHSMLQRRAEDGQDGECVKSGLGEK
ATDSLDMMFDATTFGEYKSYTCSSLDQSRHCDDDAEEVEINDQDLPETPACHNRTRQPTF
AHVAVVRKKDERSKLKGTTCKECEVYYAHLPEEEKQKKLSTCSRHRYRYIPPCTPENFWE
VGFPTTQTCIERGYIREEKNPQARSRRRQPFNVLFTPKKSQEQS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtccaggagaccgcagcggctgctccgtcagtcccgctgacctctttgaagac
gtttggaggcagctaaaagtgtgccaccagaacacagtacaggagtatcagtcgaaagtg
agcaagctgagaaatgaccgctgtctagacgctcagaagctggaggcgttttataatcgc
aaccagcagctcaaggaacaaaacaaaagcctccaggattccatcagcctgctggaagac
aggctccgtgtcgcagagtgtgatcgatgtgccgtcttggaggagaagctgaaaagcatt
caggatcagaatctggatgtcatcactaaactaaaaaatgagaacaaaaacctggaagat
gaaaacagaaatcttcaagctgaactgcagaagatgaaggtgcatcacagatgttgtttt
tgcatcagtgcggacctcgaggagacgtcggagcaggacgagggcgtcatcccggactcg
ccgatcctgaccagctcgctgcctgcggcgaacaaactgaggaaacgtaaacaccccgac
gagagcagacgtgtccgttatgcagagacgccgctgccgcagaagaataactccctcttt
aatgagttgaagaaagcggctgatggaggtgcaaagaattctgggagagaagtgcttgtg
ccaaacacttgtgaactggacacatcccagagctcaaatgacatgaaagaagaaacggag
gaggtagttggagaaacatgtgctttagaggtgcttgactgtcgtcattttaaagccaag
ttgactccacgtcatcaagacggcacacgaaatatcaggaagcgcaactctcgtttaagc
cctttctcttcagcagcacagatccgcaaaccggactcgaccacagagaaatcgccgtct
cttcttccgagtactaaacgcttttcagaggaaggttccttttgctgggccaaacagaag
gacagtggcaccgagcagcagggagaaggcagagcggggagtaaagagaaggtggataat
cagaagggagctaaacccttacaacttgaaaccactagccaggccgccacgcttggcttc
aaacaggaacagggtccaaaccaaacgctgaacatctcttatgcgagtcccactttcaag
aggccactgagtaaagctggagacaaaccagatggaagtagaagagcgcctccgcaggat
cggagtgcgtcacagaaacgccttcaatctaacaacgccggcaggaaggaaatggtggag
tccacgtggagcgtcgaccccgcgctcgccttgtccgtgtttgagagcgaggaagtggaa
gagcagcggcccggagagctggcagacaccgactgcacctgggtcagccacagcatgctg
cagcgtcgagcagaggacggtcaggacggggaatgcgtcaagtctggactcggcgaaaag
gccaccgacagtttggatatgatgtttgatgcaacaactttcggggagtacaagtcgtac
acctgctccagcttggatcagagtcggcattgtgatgatgatgccgaggaagttgagatt
aacgatcaagatcttcctgaaactcctgcgtgccacaacagaacccggcagccgacgttt
gcacacgtggccgtcgttcgcaagaaagacgagaggagcaaactgaagggcaccacatgc
aaggaatgtgaagtgtactacgctcatctgcccgaggaggaaaaacagaagaagttatcc
acttgctccagacatcgataccgctacattccaccctgcacccctgaaaacttctgggaa
gtcggattcccgacaacacagacctgcatcgaaagaggttacatcagggaggagaagaac
cctcaggctcgttcacgaaggcgacagccgtttaatgttttgttcaccccaaagaaaagc
caggagcagagctaa
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