KEGG   Xiphophorus couchianus (Monterrey platyfish): 114136810
Entry
114136810         CDS       T05908                                 
Symbol
arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
  KO
K18442  brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:xco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    114136810 (arfgef1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:xco04131]
    114136810 (arfgef1)
Membrane trafficking [BR:xco04131]
 Endosome - Golgi transport
  Arf GTPases and associated proteins
   Arf GTPase associated proteins
    114136810 (arfgef1)
SSDB
Motif
Pfam: Sec7 BIG2_C Sec7-like_HUS DCB Sec7-like_HDS
Other DBs
NCBI-GeneID: 114136810
NCBI-ProteinID: XP_027860900
LinkDB
Position
21:11019659..11076851
AA seq 1949 aa
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKEESEKLSPPSGDGKS
GSSTLPPIKSKTNFIEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSAPDST
APGKKLIDRIIETICACFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALTNHKLSWSLASRKRDRQLQEAKQLER
ERHRQQSPVAQHTEPESPQLQTHVHPPSKTPTQEANGPVSPATPSIATPSTPSTPSTPAP
ESSSSRSASGEREVQGEQPAPDENPDPENGSEFCVAENEQTEADQATVAVQNAASKQHKG
EGEEEDEEAPNYEEKAQEIVQSILQEVVNTVAGGHCLDPANLCSDTKESTGEGEPEESPP
AEAATEGTQSSMEDEGTVGSDSEHVHANGIPGTPISASFTPSLPDDRLSVSSTDTQESGA
TAGQPPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVLSLQLLLSILQ
NAGPIFKTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSHFKTHLKMQIEV
FFKEIFLYILETSTSSYDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVND
LSKIAQGRGGHELGTTPQQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQTSLGQEKP
SEQDSSETKATESINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQG
IDLFNKKPKRGIQYLQEQGMLGTTPEDLAQFLHQEERLDSTQVGEFLGDNDRFNKEVMYA
YVDQMDFQGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAY
VLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEIAGKKIAMK
ETKELTMKSNKQSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRP
MFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFT
LLTASSGIAEMKQKNIDTIKTLITVAHTDGNYLGNSWHEIMKCISQLELAQLIGTGVKAR
YISGTVRGKEGFITSTKEQNNDEYLGLVGGTVDRKQIASIQESIGETSSQSVVVAVDRIF
TGSTRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRLQWSRIWE
VIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKKNRS
PTIRDMVVRCIAQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTNVF
EKHFAATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSERPQAFKDYTSDDM
NVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTFEKHWWQDLFR
IVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYFESLNGLLLDDILAQLYWCV
QQDNEQLARSGTNCLENVVILNGEKFSAETWDKTCNCMLDIFKTTIPHALLTWRPAGAEG
EHFATHSLTDKQLDSISQKSVDIQSCSDDQHSISSGDRATMESRRQSQHSSASGVFEDGS
RSRTSTKIQEQRLFSALLIKCVVQLELIQTIDNIVFFPATSKKEDAENFAAAQRDAGCAA
DVQVETQDQGMFRYLTLEQLFKLLDCLLESHRFAKAFNSNNEQRTLLWKAGFKGKSKPNL
LKQETSSLACGLRILFRMYTDESRQGAWEEVQRRLLNVCSEAVAYFLALTSESHREAWTN
LLLLFLTKVLKISDERFKAHASRYYPLLCEIMQFDLIPELRAVLRKFYLRIGLVFNIAQL
PEPEPDPEPRRAEPETDMEVGEEAGEEAQ
NT seq 5850 nt   +upstreamnt  +downstreamnt
atgtatgagggcaaaaagacgaaaaacatgttcctcacacgagctttggagaagatcctg
gccgacaaggaggtgaagaaggctcatcactcacagctgcgtaaagcctgcgaggtggca
ctggaggaaattaaggaagaatcagagaaattaagtccaccaagtggagatggcaaatct
ggctccagcacattaccacccatcaaatccaagacaaatttcatcgaggctgacaagtac
ttcttgccgttcgagctagcatgtcaatccaaatgtcctcgcatcgtcatcacctcactc
gattgtttacagaagctgatagcgtacggccacctgacgggcagtgctccggacagcaca
gcgccaggaaagaagctcatcgacaggatcatcgagaccatctgcgcgtgttttcaggga
cctcagactgacgagggcgtgcagctacagattattaaggctctgctgacagcagtcacc
tcccagcacatagaaatccatgaaggcaccgtgctgcaagccgtccgcacctgttacaac
atctacctggcgagcaagaacctcatcaaccagaccacggcgaaggccacgctcacgcag
atgctcaacgtcatctttgcacgcatggagaaccaagcacttacaaatcacaagctatct
tggtctctggcctccagaaagcgtgaccgccagctgcaggaagccaaacagctggagaga
gagcggcaccgacagcaatccccagtagcccagcacaccgagccagaatccccccagctc
cagactcacgttcacccacccagcaagacccccacccaggaggccaacggccccgtcagc
cctgcgacccccagcatcgccaccccctccacgccgtccaccccatccacgccggccccg
gagtccagcagcagcaggtctgcgtctggggagcgggaggtgcagggggagcagcctgcc
cccgacgagaacccggatcctgaaaacggttctgagttttgtgtggctgagaacgagcag
acggaggcagaccaagccaccgtagcagtacaaaatgcagcatccaaacaacataaagga
gagggggaagaagaggatgaggaagcgcctaactacgaggagaaagcccaggaaattgtc
cagagtattctgcaggaagtggtcaacactgtggctggaggccactgcctggacccagcg
aacctctgctccgacaccaaggagtcaaccggcgagggcgagccagaggagtccccgccg
gccgaggcagcgactgaaggcacccagagctcgatggaggacgagggaacagttgggagc
gacagtgagcacgtccatgcaaatggcattcccggcacgcctatttctgctagctttacg
ccctcgttgcctgatgacagattatccgtctcctccaccgacactcaggaatcgggagca
acagctggccagccgccaggtgctaagttctcccacatcctccagaaggacgcttttctt
gtctttcgctctctctgcaagctgtcgatgaaaccactatcagacggaccgcctgatcca
aagtcccacgagctgcgatcaaaggtgttgtctctgcagcttctgctgtccatcctgcag
aatgcagggcccatcttcaagaccaacgagatgttcataaacgccatcaagcagtatttg
tgcgtggcgctgtccaagaatggtgtctcctctgtgcctgaagtctttgagctctctctc
tccatcttccttaccctgctctcccactttaagacccacctcaagatgcaaatcgaggtg
ttcttcaaagagattttcctgtacatacttgagacgtccacaagctcttatgaccacaag
tggatggtcatccaaacgctcaccagaatatgtgcagatgcccaaagtgtggtggacatc
tatgtgaactacgactgtgacttgaatgctgctaatatatttgagcgcttggtcaacgac
ctctcaaaaatagcccagggccgcggaggccacgagctcggcacaacaccccaacaggag
ctgactctaagaaagaaaggccttgaatgtctagtgtccatcttaaaatgtatggtagaa
tggagcaaagaccagtacgtcaaccccaattcccagaccagcctaggccaggagaaacct
tcagagcaggacagctcagagaccaaggccacagagagcataaaccgctacggcagcatc
aactccctggactccacggcctcgtctggcatcggtagctacagcacacaaatgtccggc
accgacaaccccgaacagtttgaagttctcaagcagcagaaggagatcatcgaacagggg
attgacctgttcaacaagaaaccaaagagaggaattcagtaccttcaagagcaaggcatg
ctgggtacaaccccagaggatcttgcacagttcttgcaccaggaggagaggcttgactcg
actcaggtgggtgaattcctcggcgataacgaccgtttcaataaagaggtcatgtacgcc
tacgtggatcaaatggacttccagggcaaagactttgtttccgctctaaggatgttcctg
gagggcttccggctccctggcgaggcccagaagatcgaccggcttatggagaaatttgca
gcaagatacctggaatgcaatcagggacaaacactctttgccagtgcagacacagcatat
gttctcgcctactcaatcatcatgttgacaacagacctccacagcccgcaggtgaagaat
aaaatgacaaaagaacagtacatcaagatgaaccgcggcatcaatgacagcaaagacctg
cctgaggagtatctctcagccatatacgatgagatcgcagggaagaagattgccatgaag
gaaacaaaagagctcaccatgaagtccaacaagcaaagtgtggccagcgagaagcagagg
cgtctgctctacaacgtggaaatggagcagatggccaagacggccaaagctctgatggag
gccgtcagccacgtccaggcccccttcaccagcgccacgcatctggagcacgtcaggccc
atgttcaagctggcgtggacacccttcctggctgccttcagcgtcggcctgcaggactgt
gacgacactgaagtggcctcgctgtgtctcgaaggaatacgctgtgccatcaggatagca
tgcatcttttccatacagctggagagggatgcttacgttcaggctctggccaggttcacc
ctgctgacggccagctccggcatcgcagaaatgaagcagaagaacatcgacaccatcaag
accctgatcactgtggcacacacggatggcaactacctgggcaactcctggcatgagatc
atgaagtgcatcagtcagctggagctggctcagctgattggtacgggggtgaaggcgcgc
tacatctcagggacggtgcgggggaaagagggtttcatcaccagcaccaaggagcagaac
aacgacgagtacctgggtttagttgggggaacagtagaccgtaagcagattgccagcatt
caggagtccattggtgagacgagctctcagagcgtggtggtggctgtggacaggatcttc
acaggctccaccagattggacggtaatgcaatagtggattttgtgcgctggctgtgtgct
gtgtccatggatgagctggcctcgcccacacatccacgcatgttcagcctgcaaaagatc
gtggagatctcctactacaacatgggccgcatcaggttgcagtggtccaggatctgggag
gtgatcggagaccacttcaataaggttggctgtaatcccaatgaagatgtagcaattttt
gccgtcgattctctcaggcagctgtccatgaagttcctggagaaaggggagctggctaac
ttccgcttccagaaggactttctgaggccgttcgagcacatcatgaagaagaacaggtct
cccaccatcagagacatggtggtgcgctgcatagctcagatggtgaactcccaggctgcc
aacatccgttcaggctggaagaacatcttctcagtgtttcacctggcggcgtccgaccag
gacgagagcatcgtggagctggccttccagaccaccggccacatcgtcacgaatgtattc
gagaagcactttgcagccaccattgactctttccaggacgccgtaaagtgtctctcggag
ttcgcctgcaacgcctctttcccagacaccagcatggaagcaatccgcctcatccgccac
tgcgccaaatacgtctcagagagaccccaggccttcaaagactacaccagtgacgacatg
aatgtagcccccgaggaccgagtgtgggtgcgagggtggttccccatcctgtttgagctc
tcctgcatcatcaacaggtgcaaactggatgtcagaaccaggggcctcacggtgatgttt
gaagtgatgaagacctatgggcataccttcgagaaacactggtggcaggacctgttcaga
atcgtcttcaggatcttcgacaacatgaagctaccggagcagcagaccgagaaagcagag
tggatgaccactacatgcaaccatgcactttatgccatctgtgacgttttcacccagtac
tttgagtccctcaatggactcctgttggatgacatcctggctcagctctactggtgtgtg
cagcaagataatgagcagctggcccgttcaggcaccaactgcctagaaaacgtggtcatc
ctcaacggggagaagttctccgccgagacctgggacaagacgtgtaactgcatgctggac
atcttcaagaccaccatcccccacgcgttgttgacgtggcgaccagcaggagcagaagga
gagcactttgcaacacacagcctgactgacaaacagctggactccatatcccagaagtct
gtggacatacagtcctgctctgacgaccagcactccatcagcagcggcgacagggccacg
atggagagccgccgccagagtcagcacagctcggcgtcgggcgtcttcgaggacggctcg
agaagcaggacctcaacaaagatccaggagcagcgcttgttctccgccctgctcataaag
tgtgtcgtgcagctggagctgatccagaccatcgataacatcgtgtttttccccgccacc
agtaagaaggaggacgcagaaaactttgcagctgctcagcgggatgctgggtgtgctgcg
gacgtccaagtggagacgcaggaccaggggatgttccgctatctgaccttggagcagctc
ttcaagctgctggactgcctgctggagtcgcatcgcttcgccaaggctttcaactccaac
aacgagcagagaacgctgctgtggaaagcaggtttcaaaggcaagtcgaagcccaacctg
ttgaagcaggagaccagcagcctggcgtgtgggctgcgcatcctgttccgcatgtacacg
gacgagagccgacaaggcgcctgggaggaggtccagaggcggctgctcaacgtttgcagc
gaggcggtggcgtacttcctggctctgacctcagaaagccacagagaggcctggaccaac
ctgctgctgctcttcctcaccaaggtgctgaagatcagcgacgaaaggttcaaggctcat
gcatccagatactaccccctcctgtgtgagatcatgcagtttgacctgatccctgaactg
cgggccgttctcaggaagttctacctgcgcatcggcctcgtctttaacattgcacagctg
cctgagccagagccagaccccgagccgaggcgtgcagagccagaaacggacatggaggtg
ggggaggaagctggggaggaggcccagtga

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