Xiphophorus couchianus (Monterrey platyfish): 114136810
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Entry
114136810 CDS
T05908
Symbol
arfgef1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1 isoform X1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114136810 (arfgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114136810 (arfgef1)
Membrane trafficking [BR:
xco04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
114136810 (arfgef1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
114136810
NCBI-ProteinID:
XP_027860900
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All DBs
Position
21:11019659..11076851
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AA seq
1949 aa
AA seq
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MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKEESEKLSPPSGDGKS
GSSTLPPIKSKTNFIEADKYFLPFELACQSKCPRIVITSLDCLQKLIAYGHLTGSAPDST
APGKKLIDRIIETICACFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALTNHKLSWSLASRKRDRQLQEAKQLER
ERHRQQSPVAQHTEPESPQLQTHVHPPSKTPTQEANGPVSPATPSIATPSTPSTPSTPAP
ESSSSRSASGEREVQGEQPAPDENPDPENGSEFCVAENEQTEADQATVAVQNAASKQHKG
EGEEEDEEAPNYEEKAQEIVQSILQEVVNTVAGGHCLDPANLCSDTKESTGEGEPEESPP
AEAATEGTQSSMEDEGTVGSDSEHVHANGIPGTPISASFTPSLPDDRLSVSSTDTQESGA
TAGQPPGAKFSHILQKDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKVLSLQLLLSILQ
NAGPIFKTNEMFINAIKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSHFKTHLKMQIEV
FFKEIFLYILETSTSSYDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVND
LSKIAQGRGGHELGTTPQQELTLRKKGLECLVSILKCMVEWSKDQYVNPNSQTSLGQEKP
SEQDSSETKATESINRYGSINSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQG
IDLFNKKPKRGIQYLQEQGMLGTTPEDLAQFLHQEERLDSTQVGEFLGDNDRFNKEVMYA
YVDQMDFQGKDFVSALRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAY
VLAYSIIMLTTDLHSPQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYDEIAGKKIAMK
ETKELTMKSNKQSVASEKQRRLLYNVEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRP
MFKLAWTPFLAAFSVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFT
LLTASSGIAEMKQKNIDTIKTLITVAHTDGNYLGNSWHEIMKCISQLELAQLIGTGVKAR
YISGTVRGKEGFITSTKEQNNDEYLGLVGGTVDRKQIASIQESIGETSSQSVVVAVDRIF
TGSTRLDGNAIVDFVRWLCAVSMDELASPTHPRMFSLQKIVEISYYNMGRIRLQWSRIWE
VIGDHFNKVGCNPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKKNRS
PTIRDMVVRCIAQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTNVF
EKHFAATIDSFQDAVKCLSEFACNASFPDTSMEAIRLIRHCAKYVSERPQAFKDYTSDDM
NVAPEDRVWVRGWFPILFELSCIINRCKLDVRTRGLTVMFEVMKTYGHTFEKHWWQDLFR
IVFRIFDNMKLPEQQTEKAEWMTTTCNHALYAICDVFTQYFESLNGLLLDDILAQLYWCV
QQDNEQLARSGTNCLENVVILNGEKFSAETWDKTCNCMLDIFKTTIPHALLTWRPAGAEG
EHFATHSLTDKQLDSISQKSVDIQSCSDDQHSISSGDRATMESRRQSQHSSASGVFEDGS
RSRTSTKIQEQRLFSALLIKCVVQLELIQTIDNIVFFPATSKKEDAENFAAAQRDAGCAA
DVQVETQDQGMFRYLTLEQLFKLLDCLLESHRFAKAFNSNNEQRTLLWKAGFKGKSKPNL
LKQETSSLACGLRILFRMYTDESRQGAWEEVQRRLLNVCSEAVAYFLALTSESHREAWTN
LLLLFLTKVLKISDERFKAHASRYYPLLCEIMQFDLIPELRAVLRKFYLRIGLVFNIAQL
PEPEPDPEPRRAEPETDMEVGEEAGEEAQ
NT seq
5850 nt
NT seq
+upstream
nt +downstream
nt
atgtatgagggcaaaaagacgaaaaacatgttcctcacacgagctttggagaagatcctg
gccgacaaggaggtgaagaaggctcatcactcacagctgcgtaaagcctgcgaggtggca
ctggaggaaattaaggaagaatcagagaaattaagtccaccaagtggagatggcaaatct
ggctccagcacattaccacccatcaaatccaagacaaatttcatcgaggctgacaagtac
ttcttgccgttcgagctagcatgtcaatccaaatgtcctcgcatcgtcatcacctcactc
gattgtttacagaagctgatagcgtacggccacctgacgggcagtgctccggacagcaca
gcgccaggaaagaagctcatcgacaggatcatcgagaccatctgcgcgtgttttcaggga
cctcagactgacgagggcgtgcagctacagattattaaggctctgctgacagcagtcacc
tcccagcacatagaaatccatgaaggcaccgtgctgcaagccgtccgcacctgttacaac
atctacctggcgagcaagaacctcatcaaccagaccacggcgaaggccacgctcacgcag
atgctcaacgtcatctttgcacgcatggagaaccaagcacttacaaatcacaagctatct
tggtctctggcctccagaaagcgtgaccgccagctgcaggaagccaaacagctggagaga
gagcggcaccgacagcaatccccagtagcccagcacaccgagccagaatccccccagctc
cagactcacgttcacccacccagcaagacccccacccaggaggccaacggccccgtcagc
cctgcgacccccagcatcgccaccccctccacgccgtccaccccatccacgccggccccg
gagtccagcagcagcaggtctgcgtctggggagcgggaggtgcagggggagcagcctgcc
cccgacgagaacccggatcctgaaaacggttctgagttttgtgtggctgagaacgagcag
acggaggcagaccaagccaccgtagcagtacaaaatgcagcatccaaacaacataaagga
gagggggaagaagaggatgaggaagcgcctaactacgaggagaaagcccaggaaattgtc
cagagtattctgcaggaagtggtcaacactgtggctggaggccactgcctggacccagcg
aacctctgctccgacaccaaggagtcaaccggcgagggcgagccagaggagtccccgccg
gccgaggcagcgactgaaggcacccagagctcgatggaggacgagggaacagttgggagc
gacagtgagcacgtccatgcaaatggcattcccggcacgcctatttctgctagctttacg
ccctcgttgcctgatgacagattatccgtctcctccaccgacactcaggaatcgggagca
acagctggccagccgccaggtgctaagttctcccacatcctccagaaggacgcttttctt
gtctttcgctctctctgcaagctgtcgatgaaaccactatcagacggaccgcctgatcca
aagtcccacgagctgcgatcaaaggtgttgtctctgcagcttctgctgtccatcctgcag
aatgcagggcccatcttcaagaccaacgagatgttcataaacgccatcaagcagtatttg
tgcgtggcgctgtccaagaatggtgtctcctctgtgcctgaagtctttgagctctctctc
tccatcttccttaccctgctctcccactttaagacccacctcaagatgcaaatcgaggtg
ttcttcaaagagattttcctgtacatacttgagacgtccacaagctcttatgaccacaag
tggatggtcatccaaacgctcaccagaatatgtgcagatgcccaaagtgtggtggacatc
tatgtgaactacgactgtgacttgaatgctgctaatatatttgagcgcttggtcaacgac
ctctcaaaaatagcccagggccgcggaggccacgagctcggcacaacaccccaacaggag
ctgactctaagaaagaaaggccttgaatgtctagtgtccatcttaaaatgtatggtagaa
tggagcaaagaccagtacgtcaaccccaattcccagaccagcctaggccaggagaaacct
tcagagcaggacagctcagagaccaaggccacagagagcataaaccgctacggcagcatc
aactccctggactccacggcctcgtctggcatcggtagctacagcacacaaatgtccggc
accgacaaccccgaacagtttgaagttctcaagcagcagaaggagatcatcgaacagggg
attgacctgttcaacaagaaaccaaagagaggaattcagtaccttcaagagcaaggcatg
ctgggtacaaccccagaggatcttgcacagttcttgcaccaggaggagaggcttgactcg
actcaggtgggtgaattcctcggcgataacgaccgtttcaataaagaggtcatgtacgcc
tacgtggatcaaatggacttccagggcaaagactttgtttccgctctaaggatgttcctg
gagggcttccggctccctggcgaggcccagaagatcgaccggcttatggagaaatttgca
gcaagatacctggaatgcaatcagggacaaacactctttgccagtgcagacacagcatat
gttctcgcctactcaatcatcatgttgacaacagacctccacagcccgcaggtgaagaat
aaaatgacaaaagaacagtacatcaagatgaaccgcggcatcaatgacagcaaagacctg
cctgaggagtatctctcagccatatacgatgagatcgcagggaagaagattgccatgaag
gaaacaaaagagctcaccatgaagtccaacaagcaaagtgtggccagcgagaagcagagg
cgtctgctctacaacgtggaaatggagcagatggccaagacggccaaagctctgatggag
gccgtcagccacgtccaggcccccttcaccagcgccacgcatctggagcacgtcaggccc
atgttcaagctggcgtggacacccttcctggctgccttcagcgtcggcctgcaggactgt
gacgacactgaagtggcctcgctgtgtctcgaaggaatacgctgtgccatcaggatagca
tgcatcttttccatacagctggagagggatgcttacgttcaggctctggccaggttcacc
ctgctgacggccagctccggcatcgcagaaatgaagcagaagaacatcgacaccatcaag
accctgatcactgtggcacacacggatggcaactacctgggcaactcctggcatgagatc
atgaagtgcatcagtcagctggagctggctcagctgattggtacgggggtgaaggcgcgc
tacatctcagggacggtgcgggggaaagagggtttcatcaccagcaccaaggagcagaac
aacgacgagtacctgggtttagttgggggaacagtagaccgtaagcagattgccagcatt
caggagtccattggtgagacgagctctcagagcgtggtggtggctgtggacaggatcttc
acaggctccaccagattggacggtaatgcaatagtggattttgtgcgctggctgtgtgct
gtgtccatggatgagctggcctcgcccacacatccacgcatgttcagcctgcaaaagatc
gtggagatctcctactacaacatgggccgcatcaggttgcagtggtccaggatctgggag
gtgatcggagaccacttcaataaggttggctgtaatcccaatgaagatgtagcaattttt
gccgtcgattctctcaggcagctgtccatgaagttcctggagaaaggggagctggctaac
ttccgcttccagaaggactttctgaggccgttcgagcacatcatgaagaagaacaggtct
cccaccatcagagacatggtggtgcgctgcatagctcagatggtgaactcccaggctgcc
aacatccgttcaggctggaagaacatcttctcagtgtttcacctggcggcgtccgaccag
gacgagagcatcgtggagctggccttccagaccaccggccacatcgtcacgaatgtattc
gagaagcactttgcagccaccattgactctttccaggacgccgtaaagtgtctctcggag
ttcgcctgcaacgcctctttcccagacaccagcatggaagcaatccgcctcatccgccac
tgcgccaaatacgtctcagagagaccccaggccttcaaagactacaccagtgacgacatg
aatgtagcccccgaggaccgagtgtgggtgcgagggtggttccccatcctgtttgagctc
tcctgcatcatcaacaggtgcaaactggatgtcagaaccaggggcctcacggtgatgttt
gaagtgatgaagacctatgggcataccttcgagaaacactggtggcaggacctgttcaga
atcgtcttcaggatcttcgacaacatgaagctaccggagcagcagaccgagaaagcagag
tggatgaccactacatgcaaccatgcactttatgccatctgtgacgttttcacccagtac
tttgagtccctcaatggactcctgttggatgacatcctggctcagctctactggtgtgtg
cagcaagataatgagcagctggcccgttcaggcaccaactgcctagaaaacgtggtcatc
ctcaacggggagaagttctccgccgagacctgggacaagacgtgtaactgcatgctggac
atcttcaagaccaccatcccccacgcgttgttgacgtggcgaccagcaggagcagaagga
gagcactttgcaacacacagcctgactgacaaacagctggactccatatcccagaagtct
gtggacatacagtcctgctctgacgaccagcactccatcagcagcggcgacagggccacg
atggagagccgccgccagagtcagcacagctcggcgtcgggcgtcttcgaggacggctcg
agaagcaggacctcaacaaagatccaggagcagcgcttgttctccgccctgctcataaag
tgtgtcgtgcagctggagctgatccagaccatcgataacatcgtgtttttccccgccacc
agtaagaaggaggacgcagaaaactttgcagctgctcagcgggatgctgggtgtgctgcg
gacgtccaagtggagacgcaggaccaggggatgttccgctatctgaccttggagcagctc
ttcaagctgctggactgcctgctggagtcgcatcgcttcgccaaggctttcaactccaac
aacgagcagagaacgctgctgtggaaagcaggtttcaaaggcaagtcgaagcccaacctg
ttgaagcaggagaccagcagcctggcgtgtgggctgcgcatcctgttccgcatgtacacg
gacgagagccgacaaggcgcctgggaggaggtccagaggcggctgctcaacgtttgcagc
gaggcggtggcgtacttcctggctctgacctcagaaagccacagagaggcctggaccaac
ctgctgctgctcttcctcaccaaggtgctgaagatcagcgacgaaaggttcaaggctcat
gcatccagatactaccccctcctgtgtgagatcatgcagtttgacctgatccctgaactg
cgggccgttctcaggaagttctacctgcgcatcggcctcgtctttaacattgcacagctg
cctgagccagagccagaccccgagccgaggcgtgcagagccagaaacggacatggaggtg
ggggaggaagctggggaggaggcccagtga
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