Xiphophorus couchianus (Monterrey platyfish): 114136825
Help
Entry
114136825 CDS
T05908
Symbol
stau2
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xco01009
]
114136825 (stau2)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114136825 (stau2)
Protein phosphatases and associated proteins [BR:
xco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114136825 (stau2)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
114136825 (stau2)
mRNA cycle factors
Stress granule specific factors
114136825 (stau2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
114136825
NCBI-ProteinID:
XP_027860931
LinkDB
All DBs
Position
21:complement(12845206..12930935)
Genome browser
AA seq
669 aa
AA seq
DB search
MAQVKVQTAAPLAGPGLSPGVSPTAMASPGPLGLQPSVNGTGPAPTPACPAPAVGYGDAP
VSATPPGSPQEDMANPKEKTPMCLVNELARFNRIQPQYKLLNERGPAHAKIFTVQLTLGE
QVWEAEGTSIKKAQHSTAAKALAESVLPRPAPRSPKVDINSNPGSITPTVELNGLAMKRG
EPAIYRPLDPKPIPNYRANYNFRGMINQRYHYPVPKIFYVQLSVGSREFIGEGRTRQAAR
HNAAMKALQALRNEPIPERPPQSPEEKVETQEGTDASKSEISLVYEIALKRNLSVNFEVL
KESGPPHMKSFLTRVTVGEFSAEGEGNSKKLSKKRAALSILQDLKKLPFIPTVEKPKTHY
KKRTKTILKTGPDYGQGMNPISRLAQIQQAKKEKEPEYQLLSERGMPRRREFVMQVKVNN
EVTTGTGPNKKVAKRNAAEAMLLQLGYKASTVSPNPSEMDNKGWNGQKAPFTEPTSNTQK
GLLHLSPDVYQEMEASRKQSGSIPVTGGSSTTGGSINYIASKDAGSCSAPVPPGHSPYYS
GSSSSPSPTATMARELLLNDPSPPADGSLPVKGKNLACSVSVQPAQQLDYLAHIQGFQVQ
YSDAQSGKDFVTYLTLSPVQMTFHGTGSTLQASHDQAALSALKQLSEQGLDPVDGPIKTT
EPCGREDGH
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtgaaagtacagaccgcagcgcccctggctggtcctggcctctcccctgga
gtttctccgacggccatggccagcccaggacccctgggtctgcagccctctgtcaacggc
acaggcccggcccccacacccgcctgccctgctcctgcagtcggatatggggacgctcct
gtgtctgccacaccaccaggctcgccccaggaggacatggcaaaccctaaagagaaaact
ccaatgtgcttggtgaatgagttagcccgtttcaacaggatccagccacagtacaagctc
ctcaatgagagaggccctgcacatgctaagatcttcacggtgcagctgactcttggggag
caggtgtgggaggcagagggcaccagcattaagaaagcccagcactccactgctgccaaa
gcgctggccgagagcgtccttcccaggcccgcgccccgctcgcctaaagtcgacatcaac
agcaacccaggcagtataacgcccaccgtggagctgaatggtcttgccatgaagagaggg
gagccagctatctacaggcccctggatcccaaacccatccccaactacagagctaattac
aacttcagagggatgattaaccaaaggtaccattatcctgtccctaagatcttctacgtg
cagctctctgtggggagtcgggagttcatcggggaaggacgcacccgccaagcagcgagg
cacaacgctgccatgaaagccctccaagcacttcgcaacgaaccgatccctgaacggcca
ccacagagtccagaagaaaaagtggagacacaggaaggaactgatgccagcaaatcagag
attagcctcgtctatgaaatcgccctcaaaagaaacttatctgttaactttgaggtgtta
aaggagagcggtccgcctcacatgaaaagcttcctgacccgcgtcaccgtcggggagttc
tctgctgagggcgaggggaacagcaagaagctgtccaagaagcgtgccgctctgtccatc
ctgcaggacttgaagaagctccccttcataccgactgtggagaaacccaagacgcactac
aagaaacgcaccaagactatcctcaagacgggacctgactatggtcagggcatgaaccca
atcagccgattagctcaaatccagcaggccaagaaggagaaggaaccggagtaccagctg
ctttcggagagagggatgccgcgacgtagggagtttgtcatgcaggtgaaggtgaataac
gaggttaccacgggaacgggacccaacaagaaggtggccaagcggaacgccgctgaggca
atgctgctgcagctgggatacaaagcctccacggtctctccgaatccctccgagatggac
aacaaaggctggaatggacaaaaggcgccttttaccgaaccaacgagtaacacccagaag
ggtctgctccatctcagccccgacgtctaccaggagatggaggccagcaggaagcagagt
ggcagcataccagtcaccggcggcagcagcaccaccggagggtccatcaattacattgca
tccaaagacgcggggtcctgctctgcccctgtgcccccaggacattctccatattacagc
ggctcgtcctcctcacccagccccactgctaccatggccagagagctgctgcttaacgac
ccgtcacctccagcagatgggtcgctgcccgtaaaggggaagaacctggcctgcagtgtt
tctgtgcagccggcgcagcagctggattacctggctcacatccagggcttccaggtgcag
tacagcgacgcgcagagtgggaaggattttgtgacctatctgaccctgtccccagtgcaa
atgactttccacggcaccgggagcaccctacaagccagccatgaccaggctgctctaagt
gccttgaaacagctgtcggagcagggactggacccagtggacggccccatcaagaccacc
gaaccatgcgggagggaggatggacattaa
DBGET
integrated database retrieval system
