Xiphophorus couchianus (Monterrey platyfish): 114136877
Help
Entry
114136877 CDS
T05908
Symbol
nphp3
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xco03037
]
114136877 (nphp3)
Cilium and associated proteins [BR:
xco03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
114136877 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
TPR_19
TPR_14
NPHP3_N
TPR_11
NACHT
AAA_16
ATPase_2
KAP_NTPase
TPR_6
AAA_22
DUF2225
ARM_TT21_4th
AAA_19
DUF4635
ANAPC3
Motif
Other DBs
NCBI-GeneID:
114136877
NCBI-ProteinID:
XP_027861069
LinkDB
All DBs
Position
21:9613338..9627940
Genome browser
AA seq
1302 aa
AA seq
DB search
MGTASSLVSPGEVIEDGYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
DLEYAAEYERLRKEYEIFRVSKNNEVTSMQKKEAKMDVENKRLRAELQALQKTYQKILRE
KEAALETKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKLQQLQTQ
GIHIFSPDDSDSDDNQTTVTAVGTQCEYWSGGVLGSEPSMGSMMQLQQTFRGPEFAHSLI
DVEGPFANVSRDDWDAAVASLLQVSPHVPQALWSNTVRCYLISTQDTKAEMEIFVKKHSV
VLRRMCEGLGHFYLNVYFPEENAASYAMVRRQEIERSSICVLLLKSTVTSPVVEDCEEAF
VKNPDGHPLVLYLRTEEDRGLTGPIRQLLERINAADKAAKVKVVDHSSSAEEGASLIYAQ
LEKVIKQELLGFEGGDDDSKDAAIDEGREEDLGDVLWDLHDEQEQIESYQQACSSTTSQL
GFQKYIDRLNDMIAAPPPTPPLLVSGGPGSGKSLLLSKWIELQQKQSPNTLFLYHFVGRP
LSISSEPVLIIKRLTVKLLQHFWSISGLSMDPSKILEEFPRWLERLSARHQGNIIIIIDS
VDQIKQAERHMKWLIDPLPVKVRVVVSVNVETCPQAWRLWPTLHLDPLSAREVKSVVIAE
CQTTDFRLTKDQEKKLERHCRSASTCNALYVTLLARMITSFQSGWSLEKSLEQCLQCQDT
LSLFRLALKMMLKFLNTDRERHIMKEMLCLVFSSHNGVSESEALDLFPELEWAALSSLLY
HLNRLCIVTLRCGLIRFQHLQACEAVRLEFLGGGSGCASYREKLIHYFNQQLSQDCVTWR
VADELPWLFQQQEDKTKLQLSLLNLFVSQNLYKRGHFSELLAYWQYVGKDKSSMATEYFD
SLKCYEKSCESEDSMTKLANLYETLGRFLKDLGLPSQAVAPLQRSLEIRETALDPDHPSV
ARSLHQLAGVYVQWKKYGNAEQLYKQALEISENAYGAEHVAVAQELESLAMLYQKQNKYE
QAEKLRKRSVRIRQKTARQKGQMYGFTLLRRRALQLEELTLGKDSADCAKTLNELGVLYY
LQNNLDAAKVFLARSLEMRQRALGPDHPDCAQSLNNLAALHTERREYETAEDMYERALEI
RRKALSPDHPSLAYTVKHLAMLYKRRGKLEKAVPLYELSLEIREKSFGPKHPSVATALVN
LAVLYCQLKKHSEALPLYERALKVYEDSLGRSHPRVGETLKNLAVLSYEEGDFERAAELY
KRAMEIKEAEPSLVCGNAPSHHSSSGDTFSLKTPAPQPHAAR
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgcatcctctttggtcagtccaggagaggtgatcgaggatggatatggcggt
gagggaggggaagcatgtgagatacccgttgaagttaagcccaaagcccgactccttcgc
agctccttccgccgtggacctcgagttatcggggccagtttcaaatccacgggctccgtg
gacctggagtatgctgcagagtacgagagacttcgtaaggagtatgaaatctttcgcgtc
agcaaaaataacgaggtcacatccatgcagaagaaggaggccaaaatggacgtggagaac
aagaggttaagagccgagctgcaggctcttcagaaaacctaccagaagattctcagagag
aaagaggctgctcttgagacaaagtaccaagctatggagagggctgccacatttgagcat
gacagggacaaagtaaaacggcagtttaagattttccgagagacaaaagagaaagagata
caagatctgttgcgtgcaaagagggatctggaggccaaattgcaacagttgcagactcag
ggtattcacatttttagccctgatgactctgactcagatgataatcaaaccactgtgact
gctgtaggaactcagtgtgaatactggtctggtggggtgctgggaagtgaaccttctatg
ggtagcatgatgcagctgcaacagacattcagaggaccggagtttgcacacagtttaata
gatgtggaaggaccgtttgcaaatgtcagcagagatgactgggatgctgcggtggccagt
ctacttcaagtgtcacctcatgtaccccaggccttatggagtaacaccgtgcgctgctac
ctaatctccacacaagataccaaagcagagatggagatctttgtcaagaaacactctgta
gtgttacggagaatgtgtgagggtctgggccatttctacctaaatgtttacttcccagag
gagaatgctgcttcatacgctatggtgcggaggcaggaaatcgagcgaagttcaatatgt
gtgcttcttctcaaatccaccgttacaagccctgtggtggaagattgtgaggaggctttt
gttaaaaacccagatggacatccactggtgctgtacctcaggactgaagaggacaggggt
ttgactggacccattaggcagctgttggaaaggattaatgctgcagacaaggctgccaaa
gtcaaggtggtggatcacagcagctctgcagaagaaggggctagcctgatttatgctcag
ctagagaaagtcatcaaacaggaattgttgggttttgaaggaggagatgatgactctaag
gatgctgccatagacgagggccgtgaggaagacctgggagacgtgctttgggatctgcat
gacgaacaggagcagattgagtcctaccaacaggcttgcagcagcaccacctcccaatta
ggttttcaaaagtatatagatcgtttaaacgacatgatagctgccccacctcccaccccc
cctctgctggtgtctggcggtccaggctcaggaaagtctctcttgctttccaaatggatt
gagctgcagcagaagcaatcccccaacactttgttcctttatcattttgtcggccgccca
ctttccataagctctgagccagttctcattatcaaacgcctcacagtgaagttgctgcag
cacttttggtccatttctggtttatccatggatcccagtaagattttggaagagtttcct
cgctggctggagagactatctgcacggcaccaaggaaacatcatcattatcattgactca
gttgaccaaataaagcaagctgaaagacacatgaagtggctgatcgaccctcttcctgta
aaagttagagtggttgtgtctgtcaatgtagagacgtgtcctcaggcgtggaggttgtgg
cccacacttcacttggacccacttagtgccagagaagtcaagagtgtagtcattgcagag
tgtcaaaccacggatttcaggctcaccaaggatcaggagaaaaagctggaaaggcactgc
cgctctgcatcgacatgcaacgcattatatgtcacactgttggcaaggatgatcaccagt
tttcaatctggctggtctctggagaagagcttggagcagtgtctgcagtgtcaggacacc
ttgtctctgttccgcctggcgcttaaaatgatgttaaagttcctcaacacagacagagag
agacacataatgaaagagatgctgtgccttgtattttccagccacaacggagtgagcgag
tcagaggcattagatcttttcccagagctagagtgggccgctctgtcttctctgctctac
cacctgaacagactctgcattgtgacccttcgctgtggactcatcaggtttcagcacctg
caggcttgtgaggctgtgaggctggagttcctaggtggaggaagtggttgtgcttcttac
agagagaaactaatccattacttcaaccagcagctcagccaggactgcgtcacatggcga
gttgcagatgagcttccctggctgttccaacagcaggaggacaaaaccaaacttcagctc
agtcttttgaacctctttgtctcccaaaacctttacaagaggggtcatttctctgagttg
ctggcttattggcagtatgtgggcaaagacaaaagctccatggcaactgagtattttgat
tccctaaaatgttacgagaagagctgtgaaagcgaggacagtatgacaaagcttgcaaac
ctttatgaaactttaggtcggtttctcaaagacctgggcctgccaagtcaggctgttgct
cctttgcaaaggtctcttgagatcagagagacagccctggatcccgaccatcccagtgtt
gcacgctctctgcaccagctggctggagtttatgtccagtggaagaagtatgggaatgct
gaacagctgtacaagcaagcacttgagataagcgagaacgcctacggcgctgagcatgtt
gctgtggcacaggagctggagtcactcgccatgctttaccagaagcaaaacaagtatgaa
caagctgagaaactcaggaagaggtcagtaaggattcggcaaaagacagcgcgacaaaaa
ggtcagatgtatggattcactttgttgagacgtagagccctccagctagaagagctgacc
ctggggaaagactctgcagactgtgctaagacgctcaatgagctgggtgtcctctactac
ctccaaaacaacctggatgctgccaaggtgttcctggctcgctctctggagatgcgccaa
cgtgccctcggtccagatcacccagactgcgcgcagtctctcaacaacctggccgcgctg
cacacagaacggagggagtacgaaacggccgaggacatgtacgagagggcgctggagatc
cgcaggaaggccctgtcaccggaccacccctctctggcgtacaccgtcaagcacctggct
atgctctataaacgcagaggcaagctggagaaggctgttccactctatgagctttctctg
gaaatcagggaaaaaagttttggtcccaaacacccaagtgtggccacagcactggtgaac
ctcgctgttctctactgccaactgaagaagcacagtgaggccttgccactttatgagcga
gcactcaaagtctatgaagatagtttgggccgctcacatccgcgggtcggagaaaccctg
aagaacctcgctgttctaagttatgaggaaggtgactttgagagggctgcagaactttac
aagcgtgcgatggagattaaagaagcagagccgtcgttggtgtgtggcaacgctccgtca
catcattcctccagcggagacacttttagtctgaagacgcctgctcctcaaccacatgct
gcaaggtga
DBGET
integrated database retrieval system
